RNA–Protein interactions for RNA: ENST00000456331.6

PPP1R9A-208, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 10,090 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-208ENST00000456331 SARNPP82979 210 aaKnown RBP4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 CCDC65Q8IXS2 484 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 BICD1Q96G01 975 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 TOPBP1Q92547 1522 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 SKILP12757 684 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 IL15P40933 162 aaPredicted RBP4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 EVCP57679 992 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 MXRA7P84157 204 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 WTAPQ15007 396 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 CFAP70Q5T0N1 1121 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 CCDC117Q8IWD4 279 aaPredicted RBP4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 SMC1BQ8NDV3 1235 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 ZBTB43O43298 467 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 CAPN2P17655 700 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 MCMDC2Q4G0Z9 681 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 HAUS3Q68CZ6 603 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 CNNM4Q6P4Q7 775 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 RNF168Q8IYW5 571 aaPredicted RBP4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 TMEM87AQ8NBN3 555 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 TCHPQ9BT92 498 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 SYNCQ9H7C4 482 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 UTP11Q9Y3A2 253 aaKnown RBP4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 SLC8A1P32418 973 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 ZSCAN23Q3MJ62 389 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 PRPF40BQ6NWY9 871 aaKnown RBP4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 INTS8Q75QN2 995 aaKnown RBP4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 SCLT1Q96NL6 688 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 TUBB6Q9BUF5 446 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 RAB17Q9H0T7 212 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 PIK3C2GO75747 1445 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 NUTM2FA1L443 756 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 GOLGA8CPA6NN73 597 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 HOXB7P09629 217 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 KLHL10Q6JEL2 608 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 CABP1Q9NZU7 370 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 CTTNBP2Q8WZ74 1663 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 YWHAEP62258 255 aaKnown RBP4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 IRX3P78415 501 aaPredicted RBP4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 NBPF8Q3BBV2 869 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 RPGRQ92834 1020 aaKnown RBP4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 NOX5Q96PH1 765 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 CYP26C1Q6V0L0 522 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 VPS52Q8N1B4 723 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 RTEL1Q9NZ71 1219 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 LCMT1Q9UIC8 334 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 INF2Q27J81 1249 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 KRT79Q5XKE5 535 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 TMTC1Q8IUR5 882 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 BBOF1Q8ND07 529 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 PRDM11Q9NQV5 511 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 SSH2Q76I76 1423 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 TRIM75PA6NK02 468 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 PFDN6O15212 129 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 BCAR3O75815 825 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 MAN1A1P33908 653 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 ZNF713Q8N859 430 aaPredicted RBP4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 TMEM87BQ96K49 555 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 CCDC114Q96M63 670 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 HELLSQ9NRZ9 838 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 FRMD4BQ9Y2L6 1034 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 POLR3AO14802 1390 aaPredicted RBP4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 TRAPPC8Q9Y2L5 1435 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 RTL1A6NKG5 1358 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 GIPC1O14908 333 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 LIN9Q5TKA1 542 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 MLKLQ8NB16 471 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 NUDT16Q96DE0 195 aaKnown RBP4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 TEX14Q8IWB6 1497 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 MAST3O60307 1309 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 FLIIQ13045 1269 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 NEDD9Q14511 834 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 IFIT1BQ5T764 474 aaKnown RBP4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 CCDC62Q6P9F0 684 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 TBC1D2Q9BYX2 928 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 CACYBPQ9HB71 228 aaKnown RBP4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 ORC3Q9UBD5 711 aaPredicted RBP4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 BRPF3Q9ULD4 1205 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 FAM169AQ9Y6X4 670 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 THAP12O43422 761 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 CALUO43852 315 aaPredicted RBP4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 SNRPA1P09661 255 aaKnown RBP4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 DEUP1Q05D60 604 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 BRD3Q15059 726 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 TCERG1LQ5VWI1 586 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 IFNL2Q8IZJ0 200 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 GRK7Q8WTQ7 553 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 TACO1Q9BSH4 297 aaKnown RBP4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 MAGEF1Q9HAY2 307 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 USP16Q9Y5T5 823 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 ATRXP46100 2492 aa4.52□□□□□ -1.69
PPP1R9A-208ENST00000456331 TSPY2A6NKD2 308 aa4.51□□□□□ -1.69
PPP1R9A-208ENST00000456331 SPDYE3A6NKU9 549 aa4.51□□□□□ -1.69
PPP1R9A-208ENST00000456331 MGEA5O60502 916 aa4.51□□□□□ -1.69
PPP1R9A-208ENST00000456331 PCP11498 1178 aaKnown RBP4.51□□□□□ -1.69
PPP1R9A-208ENST00000456331 SYT1P21579 422 aa4.51□□□□□ -1.69
PPP1R9A-208ENST00000456331 ERCC5P28715 1186 aaPredicted RBP4.51□□□□□ -1.69
PPP1R9A-208ENST00000456331 ST5P78524 1137 aa4.51□□□□□ -1.69
PPP1R9A-208ENST00000456331 CBX1P83916 185 aa4.51□□□□□ -1.69
PPP1R9A-208ENST00000456331 RTN1Q16799 776 aa4.51□□□□□ -1.69
PPP1R9A-208ENST00000456331 HAUS1Q96CS2 278 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms