RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 PI4KAP1Q8N8J0 262 aa15.84■□□□□ 0.13
SSR4-205ENST00000447375 FBXW7Q969H0 707 aa15.84■□□□□ 0.13
SSR4-205ENST00000447375 METTL22Q9BUU2 404 aaPredicted RBP15.84■□□□□ 0.13
SSR4-205ENST00000447375 WTIPA6NIX2 430 aaPredicted RBP15.83■□□□□ 0.12
SSR4-205ENST00000447375 PPP1R12BO60237 982 aaPredicted RBP15.83■□□□□ 0.12
SSR4-205ENST00000447375 MMP14P50281 582 aa15.83■□□□□ 0.12
SSR4-205ENST00000447375 HNRNPUQ00839 825 aaKnown RBP eCLIP15.83■□□□□ 0.12
SSR4-205ENST00000447375 FLIIQ13045 1269 aa15.83■□□□□ 0.12
SSR4-205ENST00000447375 PTPN18Q99952 460 aa15.83■□□□□ 0.12
SSR4-205ENST00000447375 MAP3K2Q9Y2U5 619 aa15.83■□□□□ 0.12
SSR4-205ENST00000447375 XDHP47989 1333 aa15.83■□□□□ 0.12
SSR4-205ENST00000447375 MYO3BQ8WXR4 1341 aa15.83■□□□□ 0.12
SSR4-205ENST00000447375 A0A0C4DFX4 3053 aa15.82■□□□□ 0.12
SSR4-205ENST00000447375 MNX1P50219 401 aaPredicted RBP15.82■□□□□ 0.12
SSR4-205ENST00000447375 MYD88Q99836 296 aa15.82■□□□□ 0.12
SSR4-205ENST00000447375 DEFB129Q9H1M3 183 aa15.82■□□□□ 0.12
SSR4-205ENST00000447375 COL6A3P12111 3177 aa15.82■□□□□ 0.12
SSR4-205ENST00000447375 TESPA1A2RU30 521 aaPredicted RBP15.81■□□□□ 0.12
SSR4-205ENST00000447375 UNCXA6NJT0 531 aa15.81■□□□□ 0.12
SSR4-205ENST00000447375 STRIP1Q5VSL9 837 aa15.81■□□□□ 0.12
SSR4-205ENST00000447375 CCDC191Q8NCU4 936 aa15.81■□□□□ 0.12
SSR4-205ENST00000447375 CT47B1P0C2W7 299 aaPredicted RBP15.8■□□□□ 0.12
SSR4-205ENST00000447375 HSP90B1P14625 803 aaKnown RBP15.8■□□□□ 0.12
SSR4-205ENST00000447375 GJA5P36382 358 aa15.8■□□□□ 0.12
SSR4-205ENST00000447375 FKBP5Q13451 457 aaPredicted RBP15.8■□□□□ 0.12
SSR4-205ENST00000447375 CCDC152Q4G0S7 254 aa15.8■□□□□ 0.12
SSR4-205ENST00000447375 SH3TC2Q8TF17 1288 aa15.8■□□□□ 0.12
SSR4-205ENST00000447375 ZBED3Q96IU2 234 aaPredicted RBP15.8■□□□□ 0.12
SSR4-205ENST00000447375 PRO3102Q9H379 93 aa15.8■□□□□ 0.12
SSR4-205ENST00000447375 IGKV5-2P06315 115 aa15.79■□□□□ 0.12
SSR4-205ENST00000447375 KIAA0825Q8IV33 1275 aa15.79■□□□□ 0.12
SSR4-205ENST00000447375 ANKRD18AQ8IVF6 992 aa15.79■□□□□ 0.12
SSR4-205ENST00000447375 ZBTB38Q8NAP3 1195 aaPredicted RBP15.79■□□□□ 0.12
SSR4-205ENST00000447375 CCDC85AQ96PX6 553 aaPredicted RBP15.79■□□□□ 0.12
SSR4-205ENST00000447375 MED23Q9ULK4 1368 aa15.78■□□□□ 0.12
SSR4-205ENST00000447375 IREB2P48200 963 aaKnown RBP15.78■□□□□ 0.12
SSR4-205ENST00000447375 NEXNQ0ZGT2 675 aa15.78■□□□□ 0.12
SSR4-205ENST00000447375 ALDH1L2Q3SY69 923 aa15.78■□□□□ 0.12
SSR4-205ENST00000447375 SUPT20HL1Q3ZLR7 823 aa15.78■□□□□ 0.12
SSR4-205ENST00000447375 TTLL5Q6EMB2 1281 aa15.78■□□□□ 0.12
SSR4-205ENST00000447375 MRPL50Q8N5N7 158 aaKnown RBP15.78■□□□□ 0.12
SSR4-205ENST00000447375 DNAAF4Q8WXU2 420 aa15.78■□□□□ 0.12
SSR4-205ENST00000447375 SSH1Q8WYL5 1049 aa15.78■□□□□ 0.12
SSR4-205ENST00000447375 ZFYVE28Q9HCC9 887 aa15.78■□□□□ 0.12
SSR4-205ENST00000447375 CWC25Q9NXE8 425 aaPredicted RBP15.78■□□□□ 0.12
SSR4-205ENST00000447375 COL1A1P02452 1464 aaPredicted RBP15.78■□□□□ 0.12
SSR4-205ENST00000447375 ZNF646O15015 1829 aaPredicted RBP15.78■□□□□ 0.12
SSR4-205ENST00000447375 RANBP2P49792 3224 aaKnown RBP15.77■□□□□ 0.12
SSR4-205ENST00000447375 COA1Q9GZY4 146 aa15.77■□□□□ 0.12
SSR4-205ENST00000447375 PPP2R3BQ9Y5P8 575 aa15.77■□□□□ 0.12
SSR4-205ENST00000447375 ZBED9Q6R2W3 1325 aa15.76■□□□□ 0.11
SSR4-205ENST00000447375 NEURL1BA8MQ27 555 aa15.76■□□□□ 0.11
SSR4-205ENST00000447375 PDE8AO60658 829 aa15.76■□□□□ 0.11
SSR4-205ENST00000447375 USP2O75604 605 aaPredicted RBP15.76■□□□□ 0.11
SSR4-205ENST00000447375 PCCAP05165 728 aaPredicted RBP15.76■□□□□ 0.11
SSR4-205ENST00000447375 DLGAP5Q15398 846 aa15.76■□□□□ 0.11
SSR4-205ENST00000447375 TAF1CQ15572 869 aaPredicted RBP15.76■□□□□ 0.11
SSR4-205ENST00000447375 ANKRD13AQ8IZ07 590 aa15.76■□□□□ 0.11
SSR4-205ENST00000447375 LINS1Q8NG48 757 aa15.76■□□□□ 0.11
SSR4-205ENST00000447375 HTATIP2Q9BUP3 242 aa15.76■□□□□ 0.11
SSR4-205ENST00000447375 NR2E3Q9Y5X4 410 aa15.76■□□□□ 0.11
SSR4-205ENST00000447375 CACNA1FO60840 1977 aa15.76■□□□□ 0.11
SSR4-205ENST00000447375 SOX1O00570 391 aaPredicted RBP15.75■□□□□ 0.11
SSR4-205ENST00000447375 CWF19L2Q2TBE0 894 aaKnown RBP15.75■□□□□ 0.11
SSR4-205ENST00000447375 SHISA4Q96DD7 197 aa15.75■□□□□ 0.11
SSR4-205ENST00000447375 MS4A4AQ96JQ5 239 aa15.75■□□□□ 0.11
SSR4-205ENST00000447375 SSC5DA1L4H1 1573 aa15.75■□□□□ 0.11
SSR4-205ENST00000447375 A0A1W2PPC1 479 aa15.74■□□□□ 0.11
SSR4-205ENST00000447375 F6X3S4 739 aa15.74■□□□□ 0.11
SSR4-205ENST00000447375 CCT4P50991 539 aaKnown RBP15.74■□□□□ 0.11
SSR4-205ENST00000447375 KIF22Q14807 665 aa15.74■□□□□ 0.11
SSR4-205ENST00000447375 MTFR1Q15390 333 aa15.74■□□□□ 0.11
SSR4-205ENST00000447375 BEND3Q5T5X7 828 aa15.74■□□□□ 0.11
SSR4-205ENST00000447375 NBPF12Q5TAG4 269 aaPredicted RBP15.74■□□□□ 0.11
SSR4-205ENST00000447375 OPTNQ96CV9 577 aa15.74■□□□□ 0.11
SSR4-205ENST00000447375 LRCH3Q96II8 777 aa15.74■□□□□ 0.11
SSR4-205ENST00000447375 ELP3Q9H9T3 547 aa15.74■□□□□ 0.11
SSR4-205ENST00000447375 MINPP1Q9UNW1 487 aa15.74■□□□□ 0.11
SSR4-205ENST00000447375 CEP290O15078 2479 aa15.74■□□□□ 0.11
SSR4-205ENST00000447375 LAMB1P07942 1786 aa15.73■□□□□ 0.11
SSR4-205ENST00000447375 H7C1W4 665 aa15.73■□□□□ 0.11
SSR4-205ENST00000447375 GTF2IP78347 998 aa15.73■□□□□ 0.11
SSR4-205ENST00000447375 GCKRQ14397 625 aa15.73■□□□□ 0.11
SSR4-205ENST00000447375 TXNRD3Q86VQ6 643 aa15.73■□□□□ 0.11
SSR4-205ENST00000447375 NKX2-3Q8TAU0 364 aa15.73■□□□□ 0.11
SSR4-205ENST00000447375 BRI3BPQ8WY22 251 aa15.73■□□□□ 0.11
SSR4-205ENST00000447375 JARID2Q92833 1246 aaPredicted RBP15.73■□□□□ 0.11
SSR4-205ENST00000447375 CDC5LQ99459 802 aaKnown RBP15.73■□□□□ 0.11
SSR4-205ENST00000447375 ARHGAP39Q9C0H5 1083 aa15.73■□□□□ 0.11
SSR4-205ENST00000447375 ZNF804BA4D1E1 1349 aa15.72■□□□□ 0.11
SSR4-205ENST00000447375 PTPRCP08575 1304 aa15.72■□□□□ 0.11
SSR4-205ENST00000447375 CCL15-CCL14A0A0B4J2E2 113 aa15.72■□□□□ 0.11
SSR4-205ENST00000447375 ZBTB7BO15156 539 aaPredicted RBP15.72■□□□□ 0.11
SSR4-205ENST00000447375 MYO1BO43795 1136 aa15.72■□□□□ 0.11
SSR4-205ENST00000447375 GNRH1P01148 92 aa15.72■□□□□ 0.11
SSR4-205ENST00000447375 RARSP54136 660 aaKnown RBP15.72■□□□□ 0.11
SSR4-205ENST00000447375 CCL15Q16663 113 aa15.72■□□□□ 0.11
SSR4-205ENST00000447375 MTMR14Q8NCE2 650 aa15.72■□□□□ 0.11
SSR4-205ENST00000447375 BSDC1Q9NW68 430 aaPredicted RBP15.72■□□□□ 0.11
SSR4-205ENST00000447375 CLRN2A0PK11 232 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms