RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 LRMPQ12912 555 aa7.26□□□□□ -1.25
BDNF-211ENST00000439476 TMEM266Q2M3C6 531 aa7.26□□□□□ -1.25
BDNF-211ENST00000439476 KIF4BQ2VIQ3 1234 aa7.26□□□□□ -1.25
BDNF-211ENST00000439476 SYT10Q6XYQ8 523 aa7.26□□□□□ -1.25
BDNF-211ENST00000439476 CNNM3Q8NE01 707 aa7.26□□□□□ -1.25
BDNF-211ENST00000439476 ZDHHC9Q9Y397 364 aa7.26□□□□□ -1.25
BDNF-211ENST00000439476 LAMC1P11047 1609 aa7.25□□□□□ -1.25
BDNF-211ENST00000439476 PTCH1Q13635 1447 aa7.25□□□□□ -1.25
BDNF-211ENST00000439476 GRM8O00222 908 aa7.25□□□□□ -1.25
BDNF-211ENST00000439476 LMOD1P29536 600 aaPredicted RBP7.25□□□□□ -1.25
BDNF-211ENST00000439476 TRAF1Q13077 416 aa7.25□□□□□ -1.25
BDNF-211ENST00000439476 CCDC178Q5BJE1 867 aa7.25□□□□□ -1.25
BDNF-211ENST00000439476 UNC5CLQ8IV45 518 aa7.25□□□□□ -1.25
BDNF-211ENST00000439476 NUP133Q8WUM0 1156 aa7.25□□□□□ -1.25
BDNF-211ENST00000439476 BORCS6Q96GS4 357 aa7.25□□□□□ -1.25
BDNF-211ENST00000439476 ALS2CR12Q96Q35 445 aa7.25□□□□□ -1.25
BDNF-211ENST00000439476 UNC13BO14795 1591 aa7.25□□□□□ -1.25
BDNF-211ENST00000439476 MAP3K19Q56UN5 1328 aa7.25□□□□□ -1.25
BDNF-211ENST00000439476 A0A087WZG4 1122 aa7.25□□□□□ -1.25
BDNF-211ENST00000439476 ZFYP08048 801 aaPredicted RBP7.25□□□□□ -1.25
BDNF-211ENST00000439476 IFI16Q16666 785 aaKnown RBP7.25□□□□□ -1.25
BDNF-211ENST00000439476 KSR2Q6VAB6 950 aa7.25□□□□□ -1.25
BDNF-211ENST00000439476 IFNKQ9P0W0 207 aa7.25□□□□□ -1.25
BDNF-211ENST00000439476 AMOTL2Q9Y2J4 779 aa7.25□□□□□ -1.25
BDNF-211ENST00000439476 FAM135BQ49AJ0 1406 aa7.25□□□□□ -1.25
BDNF-211ENST00000439476 FLT4P35916 1363 aa7.25□□□□□ -1.25
BDNF-211ENST00000439476 SLC27A2O14975 620 aa7.25□□□□□ -1.25
BDNF-211ENST00000439476 RPS6KB1P23443 525 aa7.25□□□□□ -1.25
BDNF-211ENST00000439476 DDIT3P35638 169 aa7.25□□□□□ -1.25
BDNF-211ENST00000439476 SMC1AQ14683 1233 aaKnown RBP7.25□□□□□ -1.25
BDNF-211ENST00000439476 ENOX2Q16206 610 aaKnown RBP7.25□□□□□ -1.25
BDNF-211ENST00000439476 ME3Q16798 604 aa7.25□□□□□ -1.25
BDNF-211ENST00000439476 ZCRB1Q8TBF4 217 aaKnown RBP7.25□□□□□ -1.25
BDNF-211ENST00000439476 KIAA1524Q8TCG1 905 aa7.25□□□□□ -1.25
BDNF-211ENST00000439476 KCNG4Q8TDN1 519 aa7.25□□□□□ -1.25
BDNF-211ENST00000439476 TM6SF1Q9BZW5 370 aa7.25□□□□□ -1.25
BDNF-211ENST00000439476 ZSWIM4Q9H7M6 989 aa7.25□□□□□ -1.25
BDNF-211ENST00000439476 SEC63Q9UGP8 760 aaKnown RBP7.25□□□□□ -1.25
BDNF-211ENST00000439476 TTC21AQ8NDW8 1320 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 NBPF7P0C2Y1 421 aaPredicted RBP7.24□□□□□ -1.25
BDNF-211ENST00000439476 NOP2P46087 812 aaKnown RBP7.24□□□□□ -1.25
BDNF-211ENST00000439476 CKAP4Q07065 602 aaKnown RBP7.24□□□□□ -1.25
BDNF-211ENST00000439476 RAD51AP2Q09MP3 1159 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 CETN1Q12798 172 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 MCMDC2Q4G0Z9 681 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 KLHL10Q6JEL2 608 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 ZNF280DQ6N043 979 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 RAB11FIP4Q86YS3 637 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 ARL10Q8N8L6 244 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 FAM227BQ96M60 508 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 FAM210AQ96ND0 272 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 CTAGE1Q96RT6 745 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 USP44Q9H0E7 712 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 EHMT1Q9H9B1 1298 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 RMND1Q9NWS8 449 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 LRP2BPQ9P2M1 347 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 STAP2Q9UGK3 403 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 MADDQ8WXG6 1647 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 ERBB3P21860 1342 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 CYP2E1P05181 493 aaPredicted RBP7.24□□□□□ -1.25
BDNF-211ENST00000439476 HAND2P61296 217 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 PSMD2Q13200 908 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 CWF19L2Q2TBE0 894 aaKnown RBP7.24□□□□□ -1.25
BDNF-211ENST00000439476 ATL3Q6DD88 541 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 STXBP4Q6ZWJ1 553 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 UBE3BQ7Z3V4 1068 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 ANKRD23Q86SG2 305 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 TTC6Q86TZ1 520 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 RASEFQ8IZ41 740 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 CPLX3Q8WVH0 158 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 TSPAN18Q96SJ8 248 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 ARFGAP3Q9NP61 516 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 MED4Q9NPJ6 270 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 ABCD1P33897 745 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 SYKP43405 635 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 LMAN1P49257 510 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 ELF2Q15723 593 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 CAVIN4Q5BKX8 364 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 MSL3Q8N5Y2 521 aaKnown RBP7.24□□□□□ -1.25
BDNF-211ENST00000439476 LINS1Q8NG48 757 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 SSH3Q8TE77 659 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 GTF3C6Q969F1 213 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 NAPBQ9H115 298 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 RIMBP3CA6NJZ7 1639 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 RIMBP3BA6NNM3 1639 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 RIMBP3Q9UFD9 1639 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 PTPDC1A2A3K4 754 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 TMCO5BA8MYB1 307 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 ZNF213O14771 459 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 NEBLO76041 1014 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 FAM160A1Q05DH4 1040 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 MEX3CQ5U5Q3 659 aaKnown RBP7.24□□□□□ -1.25
BDNF-211ENST00000439476 TOM1L2Q6ZVM7 507 aa7.24□□□□□ -1.25
BDNF-211ENST00000439476 CCDC85AQ96PX6 553 aaPredicted RBP7.24□□□□□ -1.25
BDNF-211ENST00000439476 KIF4AO95239 1232 aa7.23□□□□□ -1.25
BDNF-211ENST00000439476 ECEL1O95672 775 aa7.23□□□□□ -1.25
BDNF-211ENST00000439476 KIF5BP33176 963 aa7.23□□□□□ -1.25
BDNF-211ENST00000439476 APOBRQ0VD83 1088 aa7.23□□□□□ -1.25
BDNF-211ENST00000439476 CCDC102BQ68D86 513 aa7.23□□□□□ -1.25
BDNF-211ENST00000439476 GIGYF2Q6Y7W6 1299 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms