RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 ACBD3Q9H3P7 528 aa18.2■□□□□ 0.5
DHFR-201ENST00000439211 CHRNA2Q15822 529 aa18.2■□□□□ 0.5
DHFR-201ENST00000439211 ZNF790Q6PG37 636 aa18.2■□□□□ 0.5
DHFR-201ENST00000439211 TMEM87AQ8NBN3 555 aa18.2■□□□□ 0.5
DHFR-201ENST00000439211 MRVI1Q9Y6F6 885 aa18.2■□□□□ 0.5
DHFR-201ENST00000439211 U3KPZ7 1027 aaPredicted RBP18.2■□□□□ 0.5
DHFR-201ENST00000439211 HAND2P61296 217 aa18.19■□□□□ 0.5
DHFR-201ENST00000439211 GBP6Q6ZN66 633 aa18.19■□□□□ 0.5
DHFR-201ENST00000439211 ADCY9O60503 1353 aa18.19■□□□□ 0.5
DHFR-201ENST00000439211 KRT28Q7Z3Y7 464 aa18.19■□□□□ 0.5
DHFR-201ENST00000439211 PLEKHA4Q9H4M7 779 aa18.19■□□□□ 0.5
DHFR-201ENST00000439211 PTPRUQ92729 1446 aa18.19■□□□□ 0.5
DHFR-201ENST00000439211 NR1I2O75469 434 aa18.19■□□□□ 0.5
DHFR-201ENST00000439211 STK38Q15208 465 aa18.19■□□□□ 0.5
DHFR-201ENST00000439211 EXOC4Q96A65 974 aa18.19■□□□□ 0.5
DHFR-201ENST00000439211 TAF6LQ9Y6J9 622 aa18.19■□□□□ 0.5
DHFR-201ENST00000439211 TIMM10P62072 90 aa18.18■□□□□ 0.5
DHFR-201ENST00000439211 APOBRQ0VD83 1088 aa18.18■□□□□ 0.5
DHFR-201ENST00000439211 MMS22LQ6ZRQ5 1243 aa18.18■□□□□ 0.5
DHFR-201ENST00000439211 CCAR1Q8IX12 1150 aaKnown RBP18.18■□□□□ 0.5
DHFR-201ENST00000439211 GCKRQ14397 625 aa18.18■□□□□ 0.5
DHFR-201ENST00000439211 ERCC4Q92889 916 aaPredicted RBP18.18■□□□□ 0.5
DHFR-201ENST00000439211 SYNE3Q6ZMZ3 975 aa18.18■□□□□ 0.5
DHFR-201ENST00000439211 TMC6Q7Z403 805 aa18.18■□□□□ 0.5
DHFR-201ENST00000439211 ZBTB3Q9H5J0 574 aa18.18■□□□□ 0.5
DHFR-201ENST00000439211 NCOA5Q9HCD5 579 aaKnown RBP18.18■□□□□ 0.5
DHFR-201ENST00000439211 ITSN1Q15811 1721 aa18.18■□□□□ 0.5
DHFR-201ENST00000439211 CHGBP05060 677 aa18.17■□□□□ 0.5
DHFR-201ENST00000439211 GSDMDP57764 484 aa18.17■□□□□ 0.5
DHFR-201ENST00000439211 MCMDC2Q4G0Z9 681 aa18.17■□□□□ 0.5
DHFR-201ENST00000439211 ISM2Q6H9L7 571 aa18.17■□□□□ 0.5
DHFR-201ENST00000439211 RALYLQ86SE5 291 aaKnown RBP18.17■□□□□ 0.5
DHFR-201ENST00000439211 ZNF496Q96IT1 587 aaPredicted RBP18.17■□□□□ 0.5
DHFR-201ENST00000439211 EPC1Q9H2F5 836 aa18.17■□□□□ 0.5
DHFR-201ENST00000439211 CABLES1Q8TDN4 633 aa18.17■□□□□ 0.5
DHFR-201ENST00000439211 ZNF396Q96N95 335 aaPredicted RBP18.17■□□□□ 0.5
DHFR-201ENST00000439211 CENPHQ9H3R5 247 aa18.17■□□□□ 0.5
DHFR-201ENST00000439211 DONSONQ9NYP3 566 aa18.17■□□□□ 0.5
DHFR-201ENST00000439211 SARNPP82979 210 aaKnown RBP18.17■□□□□ 0.5
DHFR-201ENST00000439211 POLR3DP05423 398 aaPredicted RBP18.17■□□□□ 0.5
DHFR-201ENST00000439211 DHX8Q14562 1220 aaKnown RBP18.17■□□□□ 0.5
DHFR-201ENST00000439211 TNNI3KQ59H18 835 aa18.17■□□□□ 0.5
DHFR-201ENST00000439211 FSIP1Q8NA03 581 aa18.17■□□□□ 0.5
DHFR-201ENST00000439211 FPGT-TNNI3KV9GXZ4 949 aa18.17■□□□□ 0.5
DHFR-201ENST00000439211 ELP1O95163 1332 aa18.16■□□□□ 0.5
DHFR-201ENST00000439211 NRKQ7Z2Y5 1582 aa18.16■□□□□ 0.5
DHFR-201ENST00000439211 NEURL1BA8MQ27 555 aa18.16■□□□□ 0.5
DHFR-201ENST00000439211 CCP110O43303 1012 aa18.16■□□□□ 0.5
DHFR-201ENST00000439211 IFIT1P09914 478 aaKnown RBP18.16■□□□□ 0.5
DHFR-201ENST00000439211 A0A087WWV3 80 aa18.16■□□□□ 0.5
DHFR-201ENST00000439211 H2AFXP16104 143 aaPredicted RBP18.16■□□□□ 0.5
DHFR-201ENST00000439211 LIG3P49916 1009 aa18.16■□□□□ 0.5
DHFR-201ENST00000439211 JAKMIP3Q5VZ66 844 aa18.16■□□□□ 0.5
DHFR-201ENST00000439211 BIN1O00499 593 aa18.16■□□□□ 0.5
DHFR-201ENST00000439211 EPHA10Q5JZY3 1008 aa18.16■□□□□ 0.5
DHFR-201ENST00000439211 RAI14Q9P0K7 980 aa18.16■□□□□ 0.5
DHFR-201ENST00000439211 NEBLO76041 1014 aa18.15■□□□□ 0.5
DHFR-201ENST00000439211 SNRPA1P09661 255 aaKnown RBP18.15■□□□□ 0.5
DHFR-201ENST00000439211 DBNLQ9UJU6 430 aaKnown RBP18.15■□□□□ 0.5
DHFR-201ENST00000439211 ERLIN1O75477 346 aa18.15■□□□□ 0.5
DHFR-201ENST00000439211 TAF5LO75529 589 aa18.15■□□□□ 0.5
DHFR-201ENST00000439211 ERLIN2O94905 339 aa18.15■□□□□ 0.5
DHFR-201ENST00000439211 SRRTQ9BXP5 876 aaKnown RBP18.15■□□□□ 0.5
DHFR-201ENST00000439211 ORC3Q9UBD5 711 aaPredicted RBP18.15■□□□□ 0.5
DHFR-201ENST00000439211 RIMS1Q86UR5 1692 aaKnown RBP18.15■□□□□ 0.5
DHFR-201ENST00000439211 KIF1CO43896 1103 aaKnown RBP18.15■□□□□ 0.5
DHFR-201ENST00000439211 BIRC2Q13490 618 aa18.15■□□□□ 0.5
DHFR-201ENST00000439211 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.15■□□□□ 0.5
DHFR-201ENST00000439211 COL9A3Q14050 684 aaPredicted RBP18.14■□□□□ 0.49
DHFR-201ENST00000439211 MTX1Q13505 466 aa18.14■□□□□ 0.49
DHFR-201ENST00000439211 CEP57L1Q8IYX8 460 aa18.14■□□□□ 0.49
DHFR-201ENST00000439211 STK11IPQ8N1F8 1099 aa18.14■□□□□ 0.49
DHFR-201ENST00000439211 FTOQ9C0B1 505 aaKnown RBP eCLIP18.14■□□□□ 0.499e-18■■■■■ 29.4
DHFR-201ENST00000439211 NAT10Q9H0A0 1025 aaKnown RBP18.14■□□□□ 0.49
DHFR-201ENST00000439211 IGKV5-2P06315 115 aa18.14■□□□□ 0.49
DHFR-201ENST00000439211 METTL22Q9BUU2 404 aaPredicted RBP18.14■□□□□ 0.49
DHFR-201ENST00000439211 CEP126Q9P2H0 1117 aa18.14■□□□□ 0.49
DHFR-201ENST00000439211 PTPDC1A2A3K4 754 aa18.13■□□□□ 0.49
DHFR-201ENST00000439211 FAM107BQ9H098 131 aa18.13■□□□□ 0.49
DHFR-201ENST00000439211 GNG11P61952 73 aa18.13■□□□□ 0.49
DHFR-201ENST00000439211 TRDNQ13061 729 aa18.13■□□□□ 0.49
DHFR-201ENST00000439211 IFNL2Q8IZJ0 200 aa18.13■□□□□ 0.49
DHFR-201ENST00000439211 DDX17Q92841 729 aaKnown RBP18.13■□□□□ 0.49
DHFR-201ENST00000439211 CARD10Q9BWT7 1032 aa18.13■□□□□ 0.49
DHFR-201ENST00000439211 ZSCAN16Q9H4T2 348 aaPredicted RBP18.13■□□□□ 0.49
DHFR-201ENST00000439211 TTC39AQ5SRH9 613 aa18.13■□□□□ 0.49
DHFR-201ENST00000439211 CLSTN2Q9H4D0 955 aa18.13■□□□□ 0.49
DHFR-201ENST00000439211 OTUD7BQ6GQQ9 843 aa18.12■□□□□ 0.49
DHFR-201ENST00000439211 MKRN1Q9UHC7 482 aaKnown RBP18.12■□□□□ 0.49
DHFR-201ENST00000439211 NBPF11Q86T75 865 aa18.12■□□□□ 0.49
DHFR-201ENST00000439211 LRRN4CLQ8ND94 238 aa18.12■□□□□ 0.49
DHFR-201ENST00000439211 NF2P35240 595 aa18.12■□□□□ 0.49
DHFR-201ENST00000439211 TOB2Q14106 344 aaPredicted RBP18.12■□□□□ 0.49
DHFR-201ENST00000439211 PDE11AQ9HCR9 933 aa18.12■□□□□ 0.49
DHFR-201ENST00000439211 AXIN2Q9Y2T1 843 aa18.12■□□□□ 0.49
DHFR-201ENST00000439211 CYP21A2P08686 494 aa18.11■□□□□ 0.49
DHFR-201ENST00000439211 CCDC57Q2TAC2 916 aa18.11■□□□□ 0.49
DHFR-201ENST00000439211 CCDC158Q5M9N0 1113 aa18.11■□□□□ 0.49
DHFR-201ENST00000439211 PDILTQ8N807 584 aa18.11■□□□□ 0.49
DHFR-201ENST00000439211 DHX32Q7L7V1 743 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms