RNA–Protein interactions for RNA: ENST00000416671.5

CHEK2-210, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best)

Gene CHEK2, Length 2,560 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-210ENST00000416671 BICD2Q8TD16 824 aa16.15■□□□□ 0.18
CHEK2-210ENST00000416671 TRMT1Q9NXH9 659 aaKnown RBP16.15■□□□□ 0.18
CHEK2-210ENST00000416671 LRP6O75581 1613 aa16.15■□□□□ 0.18
CHEK2-210ENST00000416671 KIF2AO00139 706 aaPredicted RBP16.15■□□□□ 0.18
CHEK2-210ENST00000416671 ATG9AQ7Z3C6 839 aa16.15■□□□□ 0.18
CHEK2-210ENST00000416671 HIP1O00291 1037 aa16.14■□□□□ 0.17
CHEK2-210ENST00000416671 SLC27A2O14975 620 aa16.14■□□□□ 0.17
CHEK2-210ENST00000416671 ZKSCAN1P17029 563 aaPredicted RBP16.14■□□□□ 0.17
CHEK2-210ENST00000416671 CAPN2P17655 700 aa16.14■□□□□ 0.17
CHEK2-210ENST00000416671 ATP5JP18859 108 aa16.14■□□□□ 0.17
CHEK2-210ENST00000416671 CCAR2Q8N163 923 aaKnown RBP16.14■□□□□ 0.17
CHEK2-210ENST00000416671 PUS3Q9BZE2 481 aaKnown RBP16.14■□□□□ 0.17
CHEK2-210ENST00000416671 TSPYL1Q9H0U9 437 aa16.14■□□□□ 0.17
CHEK2-210ENST00000416671 TPCN1Q9ULQ1 816 aa16.14■□□□□ 0.17
CHEK2-210ENST00000416671 IQCB1Q15051 598 aa16.14■□□□□ 0.17
CHEK2-210ENST00000416671 BCL9LQ86UU0 1499 aa16.14■□□□□ 0.17
CHEK2-210ENST00000416671 COL15A1P39059 1388 aa16.13■□□□□ 0.17
CHEK2-210ENST00000416671 ITGB4P16144 1822 aa16.13■□□□□ 0.17
CHEK2-210ENST00000416671 CCDC69A6NI79 296 aa16.13■□□□□ 0.17
CHEK2-210ENST00000416671 NPHP1O15259 732 aa16.13■□□□□ 0.17
CHEK2-210ENST00000416671 CCZ1BP86790 482 aa16.13■□□□□ 0.17
CHEK2-210ENST00000416671 CCZ1P86791 482 aaPredicted RBP16.13■□□□□ 0.17
CHEK2-210ENST00000416671 KCNB2Q92953 911 aa16.13■□□□□ 0.17
CHEK2-210ENST00000416671 SLC4A9Q96Q91 983 aa16.13■□□□□ 0.17
CHEK2-210ENST00000416671 TNS2Q63HR2 1409 aa16.13■□□□□ 0.17
CHEK2-210ENST00000416671 NUP188Q5SRE5 1749 aa16.13■□□□□ 0.17
CHEK2-210ENST00000416671 H2AFXP16104 143 aaPredicted RBP16.13■□□□□ 0.17
CHEK2-210ENST00000416671 CCDC191Q8NCU4 936 aa16.13■□□□□ 0.17
CHEK2-210ENST00000416671 FAM89AQ96GI7 184 aa16.13■□□□□ 0.17
CHEK2-210ENST00000416671 MED23Q9ULK4 1368 aa16.12■□□□□ 0.17
CHEK2-210ENST00000416671 WNK3Q9BYP7 1800 aa16.12■□□□□ 0.17
CHEK2-210ENST00000416671 SYNE4Q8N205 404 aa16.12■□□□□ 0.17
CHEK2-210ENST00000416671 KCND1Q9NSA2 647 aa16.12■□□□□ 0.17
CHEK2-210ENST00000416671 PAPPAQ13219 1627 aa16.12■□□□□ 0.17
CHEK2-210ENST00000416671 TJP1Q07157 1748 aa16.12■□□□□ 0.17
CHEK2-210ENST00000416671 GTF3C6Q969F1 213 aa16.12■□□□□ 0.17
CHEK2-210ENST00000416671 PGBD1Q96JS3 809 aa16.12■□□□□ 0.17
CHEK2-210ENST00000416671 THRAP3Q9Y2W1 955 aaKnown RBP16.12■□□□□ 0.17
CHEK2-210ENST00000416671 HNRNPH2P55795 449 aaKnown RBP16.11■□□□□ 0.17
CHEK2-210ENST00000416671 FILIP1Q7Z7B0 1213 aa16.11■□□□□ 0.17
CHEK2-210ENST00000416671 MYH15Q9Y2K3 1946 aa16.11■□□□□ 0.17
CHEK2-210ENST00000416671 BCL9O00512 1426 aa16.11■□□□□ 0.17
CHEK2-210ENST00000416671 GOLIM4O00461 696 aa16.11■□□□□ 0.17
CHEK2-210ENST00000416671 TAF5LO75529 589 aa16.11■□□□□ 0.17
CHEK2-210ENST00000416671 ERCC6LQ2NKX8 1250 aa16.11■□□□□ 0.17
CHEK2-210ENST00000416671 FAM182BQ5T319 152 aa16.11■□□□□ 0.17
CHEK2-210ENST00000416671 USP21Q9UK80 565 aa16.11■□□□□ 0.17
CHEK2-210ENST00000416671 FHOD1Q9Y613 1164 aa16.11■□□□□ 0.17
CHEK2-210ENST00000416671 ZNF609O15014 1411 aa16.1■□□□□ 0.17
CHEK2-210ENST00000416671 BECN2A8MW95 431 aa16.1■□□□□ 0.17
CHEK2-210ENST00000416671 KCNQ2O43526 872 aa16.1■□□□□ 0.17
CHEK2-210ENST00000416671 GPTP24298 496 aa16.1■□□□□ 0.17
CHEK2-210ENST00000416671 HAUS7Q99871 368 aa16.1■□□□□ 0.17
CHEK2-210ENST00000416671 TCIRG1Q13488 830 aa16.1■□□□□ 0.17
CHEK2-210ENST00000416671 C11orf57Q6ZUT1 292 aaPredicted RBP16.1■□□□□ 0.17
CHEK2-210ENST00000416671 PLCD3Q8N3E9 789 aa16.1■□□□□ 0.17
CHEK2-210ENST00000416671 SNRKQ9NRH2 765 aa16.1■□□□□ 0.17
CHEK2-210ENST00000416671 CLCN6P51797 869 aa16.09■□□□□ 0.17
CHEK2-210ENST00000416671 MAPK8IP2Q13387 824 aaPredicted RBP16.09■□□□□ 0.17
CHEK2-210ENST00000416671 SNW1Q13573 536 aaKnown RBP16.09■□□□□ 0.17
CHEK2-210ENST00000416671 HLFQ16534 295 aa16.09■□□□□ 0.17
CHEK2-210ENST00000416671 STX1AQ16623 288 aa16.09■□□□□ 0.17
CHEK2-210ENST00000416671 L2HGDHQ9H9P8 463 aa16.09■□□□□ 0.17
CHEK2-210ENST00000416671 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.09■□□□□ 0.17
CHEK2-210ENST00000416671 NWD2Q9ULI1 1742 aa16.09■□□□□ 0.17
CHEK2-210ENST00000416671 EYA2O00167 538 aa16.09■□□□□ 0.17
CHEK2-210ENST00000416671 PSMA5P28066 241 aa16.09■□□□□ 0.17
CHEK2-210ENST00000416671 TEX35Q5T0J7 233 aa16.09■□□□□ 0.17
CHEK2-210ENST00000416671 MEX3CQ5U5Q3 659 aaKnown RBP16.09■□□□□ 0.17
CHEK2-210ENST00000416671 BARGINQ6ZT62 677 aa16.09■□□□□ 0.17
CHEK2-210ENST00000416671 TRERF1Q96PN7 1200 aa16.09■□□□□ 0.17
CHEK2-210ENST00000416671 ISCA1Q9BUE6 129 aa16.09■□□□□ 0.17
CHEK2-210ENST00000416671 CDCA7Q9BWT1 371 aaPredicted RBP16.09■□□□□ 0.17
CHEK2-210ENST00000416671 DOT1LQ8TEK3 1739 aa16.08■□□□□ 0.17
CHEK2-210ENST00000416671 A0A1B0GUL7 405 aa16.08■□□□□ 0.17
CHEK2-210ENST00000416671 PNMA6AP0CW24 399 aaPredicted RBP16.08■□□□□ 0.17
CHEK2-210ENST00000416671 GSDMDP57764 484 aa16.08■□□□□ 0.17
CHEK2-210ENST00000416671 ANKRD1Q15327 319 aa16.08■□□□□ 0.17
CHEK2-210ENST00000416671 VPS72Q15906 364 aa16.08■□□□□ 0.17
CHEK2-210ENST00000416671 BLOC1S2Q6QNY1 142 aa16.08■□□□□ 0.17
CHEK2-210ENST00000416671 FNBP4Q8N3X1 1017 aaPredicted RBP16.08■□□□□ 0.17
CHEK2-210ENST00000416671 IL15P40933 162 aaPredicted RBP16.08■□□□□ 0.16
CHEK2-210ENST00000416671 STK3Q13188 491 aa16.08■□□□□ 0.16
CHEK2-210ENST00000416671 KIF6Q6ZMV9 814 aa16.08■□□□□ 0.16
CHEK2-210ENST00000416671 PTF1AQ7RTS3 328 aa16.08■□□□□ 0.16
CHEK2-210ENST00000416671 CTAGE5O15320 804 aa16.07■□□□□ 0.16
CHEK2-210ENST00000416671 CCDC57Q2TAC2 916 aa16.07■□□□□ 0.16
CHEK2-210ENST00000416671 TRIM34Q9BYJ4 488 aa16.07■□□□□ 0.16
CHEK2-210ENST00000416671 PAG1Q9NWQ8 432 aa16.07■□□□□ 0.16
CHEK2-210ENST00000416671 STARD3NLO95772 234 aa16.06■□□□□ 0.16
CHEK2-210ENST00000416671 PLA2G4AP47712 749 aa16.06■□□□□ 0.16
CHEK2-210ENST00000416671 KBTBD3Q8NAB2 608 aa16.06■□□□□ 0.16
CHEK2-210ENST00000416671 FEZ2Q9UHY8 353 aaPredicted RBP16.06■□□□□ 0.16
CHEK2-210ENST00000416671 RAD51AP2Q09MP3 1159 aa16.06■□□□□ 0.16
CHEK2-210ENST00000416671 MCMDC2Q4G0Z9 681 aa16.06■□□□□ 0.16
CHEK2-210ENST00000416671 ARHGAP29Q52LW3 1261 aa16.06■□□□□ 0.16
CHEK2-210ENST00000416671 CCDC93Q567U6 631 aa16.06■□□□□ 0.16
CHEK2-210ENST00000416671 ARGLU1Q9NWB6 273 aaPredicted RBP16.06■□□□□ 0.16
CHEK2-210ENST00000416671 ZBTB1Q9Y2K1 713 aa16.06■□□□□ 0.16
CHEK2-210ENST00000416671 SPATA31A6Q5VVP1 1343 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms