RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 ELP1O95163 1332 aa15.68■□□□□ 0.1
RUNX3-203ENST00000399916 MAP2K1Q02750 393 aaPredicted RBP15.68■□□□□ 0.1
RUNX3-203ENST00000399916 ANKRD1Q15327 319 aa15.68■□□□□ 0.1
RUNX3-203ENST00000399916 BAG1Q99933 345 aaPredicted RBP15.68■□□□□ 0.1
RUNX3-203ENST00000399916 GUCA1BQ9UMX6 200 aa15.68■□□□□ 0.1
RUNX3-203ENST00000399916 CDC37L1Q7L3B6 337 aa15.68■□□□□ 0.1
RUNX3-203ENST00000399916 BRF1Q92994 677 aa15.68■□□□□ 0.1
RUNX3-203ENST00000399916 PPP1R12CQ9BZL4 782 aa15.68■□□□□ 0.1
RUNX3-203ENST00000399916 ZFYVE9O95405 1425 aa15.68■□□□□ 0.1
RUNX3-203ENST00000399916 NUP88Q99567 741 aaPredicted RBP15.68■□□□□ 0.1
RUNX3-203ENST00000399916 RIPOR2Q9Y4F9 1068 aa15.68■□□□□ 0.1
RUNX3-203ENST00000399916 CCDC175P0C221 793 aa15.67■□□□□ 0.1
RUNX3-203ENST00000399916 TMCO5BA8MYB1 307 aa15.67■□□□□ 0.1
RUNX3-203ENST00000399916 HSF2BPO75031 334 aa15.67■□□□□ 0.1
RUNX3-203ENST00000399916 CC2D1AQ6P1N0 951 aaPredicted RBP15.67■□□□□ 0.1
RUNX3-203ENST00000399916 HOMEZQ8IX15 550 aa15.67■□□□□ 0.1
RUNX3-203ENST00000399916 CLSTN2Q9H4D0 955 aa15.67■□□□□ 0.1
RUNX3-203ENST00000399916 FAM135BQ49AJ0 1406 aa15.67■□□□□ 0.1
RUNX3-203ENST00000399916 ATF3P18847 181 aa15.67■□□□□ 0.1
RUNX3-203ENST00000399916 STIM1Q13586 685 aa15.67■□□□□ 0.1
RUNX3-203ENST00000399916 CUL4AQ13619 759 aa15.67■□□□□ 0.1
RUNX3-203ENST00000399916 LARP1Q6PKG0 1096 aaKnown RBP15.67■□□□□ 0.1
RUNX3-203ENST00000399916 INCENPQ9NQS7 918 aa15.67■□□□□ 0.1
RUNX3-203ENST00000399916 ANXA1P04083 346 aa15.67■□□□□ 0.1
RUNX3-203ENST00000399916 ATP8B2P98198 1209 aa15.67■□□□□ 0.1
RUNX3-203ENST00000399916 DONSONQ9NYP3 566 aa15.67■□□□□ 0.1
RUNX3-203ENST00000399916 TULP4Q9NRJ4 1543 aa15.66■□□□□ 0.1
RUNX3-203ENST00000399916 PPP1R12BO60237 982 aaPredicted RBP15.66■□□□□ 0.1
RUNX3-203ENST00000399916 RNF40O75150 1001 aa15.66■□□□□ 0.1
RUNX3-203ENST00000399916 SKAP2O75563 359 aaPredicted RBP15.66■□□□□ 0.1
RUNX3-203ENST00000399916 CPLX2Q6PUV4 134 aaKnown RBP15.66■□□□□ 0.1
RUNX3-203ENST00000399916 B4GALNT4Q76KP1 1039 aa15.66■□□□□ 0.1
RUNX3-203ENST00000399916 FAM169AQ9Y6X4 670 aa15.66■□□□□ 0.1
RUNX3-203ENST00000399916 G3BP1Q13283 466 aaKnown RBP eCLIP15.66■□□□□ 0.1
RUNX3-203ENST00000399916 MARCKSP29966 332 aaPredicted RBP15.65■□□□□ 0.1
RUNX3-203ENST00000399916 ADKP55263 362 aaKnown RBP15.65■□□□□ 0.1
RUNX3-203ENST00000399916 MTHFSDQ2M296 383 aaKnown RBP15.65■□□□□ 0.1
RUNX3-203ENST00000399916 RPUSD2Q8IZ73 545 aaKnown RBP15.65■□□□□ 0.1
RUNX3-203ENST00000399916 SNX14Q9Y5W7 946 aa15.65■□□□□ 0.1
RUNX3-203ENST00000399916 LRRC7Q96NW7 1537 aa15.65■□□□□ 0.1
RUNX3-203ENST00000399916 FOXR1Q6PIV2 292 aa15.65■□□□□ 0.1
RUNX3-203ENST00000399916 RASEFQ8IZ41 740 aa15.65■□□□□ 0.1
RUNX3-203ENST00000399916 RHPN1Q8TCX5 695 aa15.65■□□□□ 0.1
RUNX3-203ENST00000399916 MCM3P25205 808 aa15.65■□□□□ 0.1
RUNX3-203ENST00000399916 TRIM68Q6AZZ1 485 aa15.65■□□□□ 0.1
RUNX3-203ENST00000399916 LEO1Q8WVC0 666 aaPredicted RBP15.65■□□□□ 0.1
RUNX3-203ENST00000399916 ARHGEF40Q8TER5 1519 aa15.65■□□□□ 0.1
RUNX3-203ENST00000399916 PPFIA4O75335 1185 aa15.64■□□□□ 0.1
RUNX3-203ENST00000399916 LTKP29376 864 aa15.64■□□□□ 0.1
RUNX3-203ENST00000399916 IFT88Q13099 833 aa15.64■□□□□ 0.1
RUNX3-203ENST00000399916 KCTD16Q68DU8 428 aa15.64■□□□□ 0.1
RUNX3-203ENST00000399916 CPLX4Q7Z7G2 160 aa15.64■□□□□ 0.1
RUNX3-203ENST00000399916 YIPF3Q9GZM5 350 aa15.64■□□□□ 0.1
RUNX3-203ENST00000399916 APOBRQ0VD83 1088 aa15.64■□□□□ 0.09
RUNX3-203ENST00000399916 MPHOSPH8Q99549 860 aa15.64■□□□□ 0.09
RUNX3-203ENST00000399916 POLD4Q9HCU8 107 aa15.64■□□□□ 0.09
RUNX3-203ENST00000399916 PPANQ9NQ55 473 aaKnown RBP15.64■□□□□ 0.09
RUNX3-203ENST00000399916 ZNHIT6Q9NWK9 470 aaKnown RBP15.64■□□□□ 0.09
RUNX3-203ENST00000399916 TPX2Q9ULW0 747 aaKnown RBP15.64■□□□□ 0.09
RUNX3-203ENST00000399916 FANCCQ00597 558 aa15.64■□□□□ 0.09
RUNX3-203ENST00000399916 MTX1Q13505 466 aa15.64■□□□□ 0.09
RUNX3-203ENST00000399916 NFXL1Q6ZNB6 911 aa15.64■□□□□ 0.09
RUNX3-203ENST00000399916 C11orf57Q6ZUT1 292 aaPredicted RBP15.64■□□□□ 0.09
RUNX3-203ENST00000399916 GOLGA6BA6NDN3 693 aa15.64■□□□□ 0.09
RUNX3-203ENST00000399916 MED14O60244 1454 aa15.64■□□□□ 0.09
RUNX3-203ENST00000399916 TUBB4AP04350 444 aa15.64■□□□□ 0.09
RUNX3-203ENST00000399916 KIF1BPQ96EK5 621 aa15.64■□□□□ 0.09
RUNX3-203ENST00000399916 NUCKS1Q9H1E3 243 aaKnown RBP15.64■□□□□ 0.09
RUNX3-203ENST00000399916 PIK3R4Q99570 1358 aa15.63■□□□□ 0.09
RUNX3-203ENST00000399916 BRD3Q15059 726 aa15.63■□□□□ 0.09
RUNX3-203ENST00000399916 TAF7Q15545 349 aaPredicted RBP15.63■□□□□ 0.09
RUNX3-203ENST00000399916 IQCA1Q86XH1 822 aa15.63■□□□□ 0.09
RUNX3-203ENST00000399916 SPDL1Q96EA4 605 aa15.63■□□□□ 0.09
RUNX3-203ENST00000399916 GNL3LQ9NVN8 582 aaKnown RBP15.63■□□□□ 0.09
RUNX3-203ENST00000399916 FHOD1Q9Y613 1164 aa15.63■□□□□ 0.09
RUNX3-203ENST00000399916 NOP2P46087 812 aaKnown RBP15.63■□□□□ 0.09
RUNX3-203ENST00000399916 MUM1L1Q5H9M0 696 aa15.63■□□□□ 0.09
RUNX3-203ENST00000399916 EFCAB6Q5THR3 1501 aa15.63■□□□□ 0.09
RUNX3-203ENST00000399916 TXLNAP40222 546 aa15.63■□□□□ 0.09
RUNX3-203ENST00000399916 IFT81Q8WYA0 676 aa15.63■□□□□ 0.09
RUNX3-203ENST00000399916 SEC62Q99442 399 aaKnown RBP15.63■□□□□ 0.09
RUNX3-203ENST00000399916 AP5Z1O43299 807 aa15.62■□□□□ 0.09
RUNX3-203ENST00000399916 SND1Q7KZF4 910 aaKnown RBP eCLIP15.62■□□□□ 0.09
RUNX3-203ENST00000399916 CAPS2Q9BXY5 557 aa15.62■□□□□ 0.09
RUNX3-203ENST00000399916 ABCB6Q9NP58 842 aa15.62■□□□□ 0.09
RUNX3-203ENST00000399916 KIF13AQ9H1H9 1805 aa15.62■□□□□ 0.09
RUNX3-203ENST00000399916 TULP2O00295 520 aa15.62■□□□□ 0.09
RUNX3-203ENST00000399916 TRDNQ13061 729 aa15.62■□□□□ 0.09
RUNX3-203ENST00000399916 SLFNL1Q499Z3 407 aa15.62■□□□□ 0.09
RUNX3-203ENST00000399916 IQCEQ6IPM2 695 aa15.62■□□□□ 0.09
RUNX3-203ENST00000399916 PNPLA6Q8IY17 1366 aa15.62■□□□□ 0.09
RUNX3-203ENST00000399916 PIP4K2BP78356 416 aa15.62■□□□□ 0.09
RUNX3-203ENST00000399916 AIMP1Q12904 312 aaKnown RBP15.62■□□□□ 0.09
RUNX3-203ENST00000399916 RUFY3Q7L099 469 aa15.62■□□□□ 0.09
RUNX3-203ENST00000399916 ZNF513Q8N8E2 541 aaPredicted RBP15.62■□□□□ 0.09
RUNX3-203ENST00000399916 DHX58Q96C10 678 aa15.62■□□□□ 0.09
RUNX3-203ENST00000399916 IL25Q9H293 177 aa15.62■□□□□ 0.09
RUNX3-203ENST00000399916 PHAXQ9H814 394 aaKnown RBP15.62■□□□□ 0.09
RUNX3-203ENST00000399916 BIN2Q9UBW5 565 aaPredicted RBP15.62■□□□□ 0.09
RUNX3-203ENST00000399916 TMEM2Q9UHN6 1383 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms