RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 PRIMPOLQ96LW4 560 aa20.24■□□□□ 0.83
CNTNAP3-204ENST00000377656 SPDYE3A6NKU9 549 aa20.24■□□□□ 0.83
CNTNAP3-204ENST00000377656 BRAPQ7Z569 592 aa20.24■□□□□ 0.83
CNTNAP3-204ENST00000377656 TFCP2L1Q9NZI6 479 aa20.24■□□□□ 0.83
CNTNAP3-204ENST00000377656 HOXB7P09629 217 aa20.24■□□□□ 0.83
CNTNAP3-204ENST00000377656 PLVAPQ9BX97 442 aa20.24■□□□□ 0.83
CNTNAP3-204ENST00000377656 GNA11P29992 359 aa20.23■□□□□ 0.83
CNTNAP3-204ENST00000377656 EYA2O00167 538 aa20.23■□□□□ 0.83
CNTNAP3-204ENST00000377656 HSPA2P54652 639 aa20.23■□□□□ 0.83
CNTNAP3-204ENST00000377656 USP26Q9BXU7 913 aa20.23■□□□□ 0.83
CNTNAP3-204ENST00000377656 LMOD1P29536 600 aaPredicted RBP20.23■□□□□ 0.83
CNTNAP3-204ENST00000377656 KRT2P35908 639 aa20.23■□□□□ 0.83
CNTNAP3-204ENST00000377656 TNNI2P48788 182 aa20.23■□□□□ 0.83
CNTNAP3-204ENST00000377656 DHX37Q8IY37 1157 aaKnown RBP20.23■□□□□ 0.83
CNTNAP3-204ENST00000377656 PLBD2Q8NHP8 589 aa20.23■□□□□ 0.83
CNTNAP3-204ENST00000377656 FAM89AQ96GI7 184 aa20.23■□□□□ 0.83
CNTNAP3-204ENST00000377656 ACTN2P35609 894 aa20.22■□□□□ 0.83
CNTNAP3-204ENST00000377656 HELLSQ9NRZ9 838 aa20.22■□□□□ 0.83
CNTNAP3-204ENST00000377656 EYA3Q99504 573 aa20.22■□□□□ 0.83
CNTNAP3-204ENST00000377656 CALRP27797 417 aaKnown RBP20.22■□□□□ 0.83
CNTNAP3-204ENST00000377656 TYRO3Q06418 890 aa20.22■□□□□ 0.83
CNTNAP3-204ENST00000377656 KIAA0753Q2KHM9 967 aa20.22■□□□□ 0.83
CNTNAP3-204ENST00000377656 IL13P35225 146 aa20.21■□□□□ 0.83
CNTNAP3-204ENST00000377656 TIMM10P62072 90 aa20.21■□□□□ 0.83
CNTNAP3-204ENST00000377656 VEZTQ9HBM0 779 aa20.21■□□□□ 0.83
CNTNAP3-204ENST00000377656 BTG4Q9NY30 223 aa20.21■□□□□ 0.83
CNTNAP3-204ENST00000377656 CTR9Q6PD62 1173 aa20.21■□□□□ 0.83
CNTNAP3-204ENST00000377656 METTL22Q9BUU2 404 aaPredicted RBP20.21■□□□□ 0.83
CNTNAP3-204ENST00000377656 INCENPQ9NQS7 918 aa20.21■□□□□ 0.83
CNTNAP3-204ENST00000377656 PARP3Q9Y6F1 533 aa20.21■□□□□ 0.83
CNTNAP3-204ENST00000377656 SH3TC1Q8TE82 1336 aa20.21■□□□□ 0.83
CNTNAP3-204ENST00000377656 A0A1B0GUL7 405 aa20.21■□□□□ 0.83
CNTNAP3-204ENST00000377656 CCDC97Q96F63 343 aaPredicted RBP20.21■□□□□ 0.83
CNTNAP3-204ENST00000377656 SBNO1A3KN83 1393 aa20.2■□□□□ 0.82
CNTNAP3-204ENST00000377656 CKAP4Q07065 602 aaKnown RBP20.2■□□□□ 0.82
CNTNAP3-204ENST00000377656 ZNF830Q96NB3 372 aaPredicted RBP20.2■□□□□ 0.82
CNTNAP3-204ENST00000377656 FSD2A1L4K1 749 aa20.2■□□□□ 0.82
CNTNAP3-204ENST00000377656 MBD4O95243 580 aa20.2■□□□□ 0.82
CNTNAP3-204ENST00000377656 GOLGA6L10A0A0M3HER8 536 aa20.2■□□□□ 0.82
CNTNAP3-204ENST00000377656 PARP10Q53GL7 1025 aa20.2■□□□□ 0.82
CNTNAP3-204ENST00000377656 TTC6Q86TZ1 520 aa20.2■□□□□ 0.82
CNTNAP3-204ENST00000377656 FERMT1Q9BQL6 677 aa20.2■□□□□ 0.82
CNTNAP3-204ENST00000377656 GTPBP4Q9BZE4 634 aaKnown RBP20.2■□□□□ 0.82
CNTNAP3-204ENST00000377656 DNAI1Q9UI46 699 aa20.2■□□□□ 0.82
CNTNAP3-204ENST00000377656 DENND2AQ9ULE3 1009 aa20.2■□□□□ 0.82
CNTNAP3-204ENST00000377656 CCDC175P0C221 793 aa20.2■□□□□ 0.82
CNTNAP3-204ENST00000377656 PHACTR2O75167 634 aa20.19■□□□□ 0.82
CNTNAP3-204ENST00000377656 SYT1P21579 422 aa20.19■□□□□ 0.82
CNTNAP3-204ENST00000377656 BMS1Q14692 1282 aaKnown RBP20.19■□□□□ 0.82
CNTNAP3-204ENST00000377656 NOLC1Q14978 699 aaKnown RBP eCLIP20.19■□□□□ 0.82
CNTNAP3-204ENST00000377656 MAATS1Q7Z4T9 603 aa20.19■□□□□ 0.82
CNTNAP3-204ENST00000377656 CHL1O00533 1208 aa20.19■□□□□ 0.82
CNTNAP3-204ENST00000377656 TMEM87AQ8NBN3 555 aa20.19■□□□□ 0.82
CNTNAP3-204ENST00000377656 RXRAP19793 462 aa20.19■□□□□ 0.82
CNTNAP3-204ENST00000377656 JDP2Q8WYK2 163 aa20.19■□□□□ 0.82
CNTNAP3-204ENST00000377656 PRIM1P49642 420 aaKnown RBP20.18■□□□□ 0.82
CNTNAP3-204ENST00000377656 DTHD1Q6ZMT9 781 aa20.18■□□□□ 0.82
CNTNAP3-204ENST00000377656 IQUBQ8NA54 791 aa20.18■□□□□ 0.82
CNTNAP3-204ENST00000377656 PKNOX2Q96KN3 472 aa20.18■□□□□ 0.82
CNTNAP3-204ENST00000377656 TCHPQ9BT92 498 aa20.18■□□□□ 0.82
CNTNAP3-204ENST00000377656 CDCA7Q9BWT1 371 aaPredicted RBP20.18■□□□□ 0.82
CNTNAP3-204ENST00000377656 EDC4Q6P2E9 1401 aaKnown RBP20.18■□□□□ 0.82
CNTNAP3-204ENST00000377656 GNPATO15228 680 aa20.18■□□□□ 0.82
CNTNAP3-204ENST00000377656 RIMBP2O15034 1052 aa20.18■□□□□ 0.82
CNTNAP3-204ENST00000377656 HS2ST1Q7LGA3 356 aa20.18■□□□□ 0.82
CNTNAP3-204ENST00000377656 CTAGE15A4D2H0 777 aa20.17■□□□□ 0.82
CNTNAP3-204ENST00000377656 CTAGE8P0CG41 777 aa20.17■□□□□ 0.82
CNTNAP3-204ENST00000377656 PTGS1P23219 599 aa20.17■□□□□ 0.82
CNTNAP3-204ENST00000377656 UBE4AQ14139 1066 aa20.17■□□□□ 0.82
CNTNAP3-204ENST00000377656 ATL3Q6DD88 541 aa20.17■□□□□ 0.82
CNTNAP3-204ENST00000377656 CTAGE6Q86UF2 777 aa20.17■□□□□ 0.82
CNTNAP3-204ENST00000377656 CTAGE4Q8IX94 777 aa20.17■□□□□ 0.82
CNTNAP3-204ENST00000377656 B4DLN1 442 aa20.17■□□□□ 0.82
CNTNAP3-204ENST00000377656 MCM7P33993 719 aa20.17■□□□□ 0.82
CNTNAP3-204ENST00000377656 MRPL12P52815 198 aaKnown RBP20.17■□□□□ 0.82
CNTNAP3-204ENST00000377656 TNNI3KQ59H18 835 aa20.17■□□□□ 0.82
CNTNAP3-204ENST00000377656 TRAPPC3LQ5T215 181 aa20.17■□□□□ 0.82
CNTNAP3-204ENST00000377656 MICALCLQ6ZW33 695 aa20.17■□□□□ 0.82
CNTNAP3-204ENST00000377656 SYNCQ9H7C4 482 aa20.17■□□□□ 0.82
CNTNAP3-204ENST00000377656 FPGT-TNNI3KV9GXZ4 949 aa20.17■□□□□ 0.82
CNTNAP3-204ENST00000377656 ITGA6P23229 1130 aa20.17■□□□□ 0.82
CNTNAP3-204ENST00000377656 RBM28Q9NW13 759 aaKnown RBP20.17■□□□□ 0.82
CNTNAP3-204ENST00000377656 JAG2Q9Y219 1238 aa20.17■□□□□ 0.82
CNTNAP3-204ENST00000377656 BICDL2A1A5D9 508 aa20.17■□□□□ 0.82
CNTNAP3-204ENST00000377656 DYNC1I1O14576 645 aa20.17■□□□□ 0.82
CNTNAP3-204ENST00000377656 TACC1O75410 805 aa20.16■□□□□ 0.82
CNTNAP3-204ENST00000377656 DBNDD2Q9BQY9 259 aa20.16■□□□□ 0.82
CNTNAP3-204ENST00000377656 BBXQ8WY36 941 aaPredicted RBP20.16■□□□□ 0.82
CNTNAP3-204ENST00000377656 IMPG2Q9BZV3 1241 aa20.16■□□□□ 0.82
CNTNAP3-204ENST00000377656 RNF216Q9NWF9 866 aaPredicted RBP20.16■□□□□ 0.82
CNTNAP3-204ENST00000377656 MAST1Q9Y2H9 1570 aa20.16■□□□□ 0.82
CNTNAP3-204ENST00000377656 ABCA5Q8WWZ7 1642 aa20.16■□□□□ 0.82
CNTNAP3-204ENST00000377656 MAGI3Q5TCQ9 1506 aa20.16■□□□□ 0.82
CNTNAP3-204ENST00000377656 DRC1Q96MC2 740 aa20.15■□□□□ 0.82
CNTNAP3-204ENST00000377656 TUBB4AP04350 444 aa20.15■□□□□ 0.82
CNTNAP3-204ENST00000377656 STX17P56962 302 aa20.15■□□□□ 0.82
CNTNAP3-204ENST00000377656 KRT83P78385 493 aa20.15■□□□□ 0.82
CNTNAP3-204ENST00000377656 PUM3Q15397 648 aaKnown RBP20.15■□□□□ 0.82
CNTNAP3-204ENST00000377656 CCDC42Q96M95 316 aa20.15■□□□□ 0.82
CNTNAP3-204ENST00000377656 CPA1P15085 419 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms