RNA–Protein interactions for RNA: ENST00000376400.3

CFTRP3-201, Transcript of cystic fibrosis transmembrane conductance regulator pseudogene 3, humanhuman

BASIC

Gene CFTRP3, Length 212 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP3-201ENST00000376400 PNNQ9H307 717 aaKnown RBP12.76□□□□□ -0.37
CFTRP3-201ENST00000376400 PRDM9Q9NQV7 894 aa12.76□□□□□ -0.37
CFTRP3-201ENST00000376400 SPTLC1O15269 473 aa12.75□□□□□ -0.37
CFTRP3-201ENST00000376400 TAF1P21675 1872 aa12.75□□□□□ -0.37
CFTRP3-201ENST00000376400 PROSER3Q2NL68 480 aa12.75□□□□□ -0.37
CFTRP3-201ENST00000376400 MYSM1Q5VVJ2 828 aa12.75□□□□□ -0.37
CFTRP3-201ENST00000376400 FAM117AQ9C073 453 aa12.75□□□□□ -0.37
CFTRP3-201ENST00000376400 TSPYL4Q9UJ04 414 aa12.75□□□□□ -0.37
CFTRP3-201ENST00000376400 RNF123Q5XPI4 1314 aa12.74□□□□□ -0.37
CFTRP3-201ENST00000376400 EPHX2P34913 555 aa12.74□□□□□ -0.37
CFTRP3-201ENST00000376400 RIPK4P57078 832 aa12.74□□□□□ -0.37
CFTRP3-201ENST00000376400 CC2D2BQ6DHV5 1058 aa12.74□□□□□ -0.37
CFTRP3-201ENST00000376400 RETREG3Q86VR2 466 aa12.74□□□□□ -0.37
CFTRP3-201ENST00000376400 RPGRQ92834 1020 aaKnown RBP12.74□□□□□ -0.37
CFTRP3-201ENST00000376400 CRAMP1Q96RY5 1269 aa12.74□□□□□ -0.37
CFTRP3-201ENST00000376400 HACL1Q9UJ83 578 aa12.74□□□□□ -0.37
CFTRP3-201ENST00000376400 V9GY48 417 aaPredicted RBP12.74□□□□□ -0.37
CFTRP3-201ENST00000376400 CNTNAP1P78357 1384 aa12.73□□□□□ -0.37
CFTRP3-201ENST00000376400 ANXA1P04083 346 aa12.73□□□□□ -0.37
CFTRP3-201ENST00000376400 PRKCSHP14314 528 aaPredicted RBP12.73□□□□□ -0.37
CFTRP3-201ENST00000376400 TMPOP42166 694 aaKnown RBP12.73□□□□□ -0.37
CFTRP3-201ENST00000376400 RALBP1Q15311 655 aa12.73□□□□□ -0.37
CFTRP3-201ENST00000376400 GPC2Q8N158 579 aa12.73□□□□□ -0.37
CFTRP3-201ENST00000376400 BABAM1Q9NWV8 329 aa12.73□□□□□ -0.37
CFTRP3-201ENST00000376400 MKRN1Q9UHC7 482 aaKnown RBP12.73□□□□□ -0.37
CFTRP3-201ENST00000376400 DDX60Q8IY21 1712 aaKnown RBP12.73□□□□□ -0.37
CFTRP3-201ENST00000376400 MTMR2Q13614 643 aa12.72□□□□□ -0.37
CFTRP3-201ENST00000376400 PARP10Q53GL7 1025 aa12.72□□□□□ -0.37
CFTRP3-201ENST00000376400 EAPPQ56P03 285 aaPredicted RBP12.72□□□□□ -0.37
CFTRP3-201ENST00000376400 SLC10A5Q5PT55 438 aa12.72□□□□□ -0.37
CFTRP3-201ENST00000376400 TRPM7Q96QT4 1865 aa12.72□□□□□ -0.37
CFTRP3-201ENST00000376400 LRRC37AA6NMS7 1700 aa12.71□□□□□ -0.37
CFTRP3-201ENST00000376400 EIF2S2P20042 333 aaKnown RBP12.71□□□□□ -0.37
CFTRP3-201ENST00000376400 MMP16P51512 607 aa12.71□□□□□ -0.37
CFTRP3-201ENST00000376400 PPP1R42Q7Z4L9 355 aa12.71□□□□□ -0.37
CFTRP3-201ENST00000376400 JDP2Q8WYK2 163 aa12.71□□□□□ -0.37
CFTRP3-201ENST00000376400 RBM17Q96I25 401 aaKnown RBP12.71□□□□□ -0.37
CFTRP3-201ENST00000376400 FCF1Q9Y324 198 aaKnown RBP12.71□□□□□ -0.37
CFTRP3-201ENST00000376400 PCDHB15Q9Y5E8 787 aa12.71□□□□□ -0.37
CFTRP3-201ENST00000376400 SPDYE5A6NIY4 337 aa12.7□□□□□ -0.38
CFTRP3-201ENST00000376400 SLC19A1P41440 591 aa12.7□□□□□ -0.38
CFTRP3-201ENST00000376400 SCNN1DP51172 638 aa12.7□□□□□ -0.38
CFTRP3-201ENST00000376400 CSPP1Q1MSJ5 1256 aa12.7□□□□□ -0.38
CFTRP3-201ENST00000376400 KRT24Q2M2I5 525 aa12.7□□□□□ -0.38
CFTRP3-201ENST00000376400 PNMA8AQ86V59 439 aaPredicted RBP12.7□□□□□ -0.38
CFTRP3-201ENST00000376400 TNS4Q8IZW8 715 aa12.7□□□□□ -0.38
CFTRP3-201ENST00000376400 UTP14AQ9BVJ6 771 aaKnown RBP12.7□□□□□ -0.38
CFTRP3-201ENST00000376400 THSD7BQ9C0I4 1608 aa12.7□□□□□ -0.38
CFTRP3-201ENST00000376400 DUOX1Q9NRD9 1551 aa12.69□□□□□ -0.38
CFTRP3-201ENST00000376400 ABCC4O15439 1325 aa12.69□□□□□ -0.38
CFTRP3-201ENST00000376400 MYBBP1AQ9BQG0 1328 aaKnown RBP12.69□□□□□ -0.38
CFTRP3-201ENST00000376400 TMEM88BA6NKF7 163 aa12.69□□□□□ -0.38
CFTRP3-201ENST00000376400 CHL1O00533 1208 aa12.69□□□□□ -0.38
CFTRP3-201ENST00000376400 DXOO77932 396 aaKnown RBP12.69□□□□□ -0.38
CFTRP3-201ENST00000376400 BRPF1P55201 1214 aaPredicted RBP12.69□□□□□ -0.38
CFTRP3-201ENST00000376400 LMOD3Q0VAK6 560 aa12.69□□□□□ -0.38
CFTRP3-201ENST00000376400 MAP1SQ66K74 1059 aaPredicted RBP12.69□□□□□ -0.38
CFTRP3-201ENST00000376400 COPS6Q7L5N1 327 aa12.69□□□□□ -0.38
CFTRP3-201ENST00000376400 NLRP10Q86W26 655 aa12.69□□□□□ -0.38
CFTRP3-201ENST00000376400 CNTROBQ8N137 903 aa12.69□□□□□ -0.38
CFTRP3-201ENST00000376400 LARGE2Q8N3Y3 721 aa12.69□□□□□ -0.38
CFTRP3-201ENST00000376400 XAGE3Q8WTP9 111 aa12.69□□□□□ -0.38
CFTRP3-201ENST00000376400 NLRP3Q96P20 1036 aa12.69□□□□□ -0.38
CFTRP3-201ENST00000376400 LIMD1Q9UGP4 676 aa12.69□□□□□ -0.38
CFTRP3-201ENST00000376400 ATP6V0A2Q9Y487 856 aa12.69□□□□□ -0.38
CFTRP3-201ENST00000376400 TCERG1O14776 1098 aaKnown RBP12.68□□□□□ -0.38
CFTRP3-201ENST00000376400 JUNDP17535 347 aa12.68□□□□□ -0.38
CFTRP3-201ENST00000376400 CLK2P49760 499 aaKnown RBP12.68□□□□□ -0.38
CFTRP3-201ENST00000376400 VEGFBP49765 207 aa12.68□□□□□ -0.38
CFTRP3-201ENST00000376400 EIF6P56537 245 aaKnown RBP12.68□□□□□ -0.38
CFTRP3-201ENST00000376400 PRPF38BQ5VTL8 546 aaKnown RBP12.68□□□□□ -0.38
CFTRP3-201ENST00000376400 CCDC146Q8IYE0 955 aa12.68□□□□□ -0.38
CFTRP3-201ENST00000376400 POLR3EQ9NVU0 708 aa12.68□□□□□ -0.38
CFTRP3-201ENST00000376400 GJA3Q9Y6H8 435 aa12.68□□□□□ -0.38
CFTRP3-201ENST00000376400 COL4A1P02462 1669 aa12.67□□□□□ -0.38
CFTRP3-201ENST00000376400 RASSF10A6NK89 507 aa12.67□□□□□ -0.38
CFTRP3-201ENST00000376400 FOXN1O15353 648 aa12.67□□□□□ -0.38
CFTRP3-201ENST00000376400 EPS15P42566 896 aa12.67□□□□□ -0.38
CFTRP3-201ENST00000376400 TCIRG1Q13488 830 aa12.67□□□□□ -0.38
CFTRP3-201ENST00000376400 TUSC1Q2TAM9 212 aa12.67□□□□□ -0.38
CFTRP3-201ENST00000376400 PLA2G2CQ5R387 149 aa12.67□□□□□ -0.38
CFTRP3-201ENST00000376400 RTFDC1Q9BY42 306 aaPredicted RBP12.67□□□□□ -0.38
CFTRP3-201ENST00000376400 DDX21Q9NR30 783 aaKnown RBP eCLIP12.67□□□□□ -0.38
CFTRP3-201ENST00000376400 PPIP5K2O43314 1243 aa12.66□□□□□ -0.38
CFTRP3-201ENST00000376400 HCLS1P14317 486 aaPredicted RBP12.66□□□□□ -0.38
CFTRP3-201ENST00000376400 AIMP1Q12904 312 aaKnown RBP12.66□□□□□ -0.38
CFTRP3-201ENST00000376400 DDX10Q13206 875 aaKnown RBP12.66□□□□□ -0.38
CFTRP3-201ENST00000376400 AOC3Q16853 763 aa12.66□□□□□ -0.38
CFTRP3-201ENST00000376400 HSP90AB3PQ58FF7 597 aa12.66□□□□□ -0.38
CFTRP3-201ENST00000376400 LIAT1Q6ZQX7 453 aa12.66□□□□□ -0.38
CFTRP3-201ENST00000376400 NIM1KQ8IY84 436 aa12.66□□□□□ -0.38
CFTRP3-201ENST00000376400 PRR7Q8TB68 274 aa12.66□□□□□ -0.38
CFTRP3-201ENST00000376400 RUNDC1Q96C34 613 aa12.66□□□□□ -0.38
CFTRP3-201ENST00000376400 VPS33BQ9H267 617 aa12.66□□□□□ -0.38
CFTRP3-201ENST00000376400 CHPF2Q9P2E5 772 aa12.66□□□□□ -0.38
CFTRP3-201ENST00000376400 BBOX1O75936 387 aa12.65□□□□□ -0.38
CFTRP3-201ENST00000376400 LMOD1P29536 600 aaPredicted RBP12.65□□□□□ -0.38
CFTRP3-201ENST00000376400 FMR1Q06787 632 aaKnown RBP eCLIP12.65□□□□□ -0.38
CFTRP3-201ENST00000376400 SKIV2LQ15477 1246 aaKnown RBP12.65□□□□□ -0.38
CFTRP3-201ENST00000376400 SP8Q8IXZ3 490 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms