RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 TAOK1Q7L7X3 1001 aa9.89□□□□□ -0.83
COL6A6-201ENST00000358511 MINDY4BA8MYZ0 360 aa9.89□□□□□ -0.83
COL6A6-201ENST00000358511 PHLDB2Q86SQ0 1253 aa9.89□□□□□ -0.83
COL6A6-201ENST00000358511 FAM71BQ8TC56 605 aa9.89□□□□□ -0.83
COL6A6-201ENST00000358511 CABS1Q96KC9 395 aa9.89□□□□□ -0.83
COL6A6-201ENST00000358511 ALG1Q9BT22 464 aa9.89□□□□□ -0.83
COL6A6-201ENST00000358511 CCDC8Q9H0W5 538 aaPredicted RBP9.89□□□□□ -0.83
COL6A6-201ENST00000358511 CBX8Q9HC52 389 aa9.89□□□□□ -0.83
COL6A6-201ENST00000358511 USP5P45974 858 aa9.88□□□□□ -0.83
COL6A6-201ENST00000358511 CABP4P57796 275 aa9.88□□□□□ -0.83
COL6A6-201ENST00000358511 SMARCC2Q8TAQ2 1214 aa9.88□□□□□ -0.83
COL6A6-201ENST00000358511 TTC21AQ8NDW8 1320 aa9.88□□□□□ -0.83
COL6A6-201ENST00000358511 CCDC144CPQ8IYA2 1237 aa9.88□□□□□ -0.83
COL6A6-201ENST00000358511 RNF10Q8N5U6 811 aaKnown RBP9.88□□□□□ -0.83
COL6A6-201ENST00000358511 UTP11Q9Y3A2 253 aaKnown RBP9.88□□□□□ -0.83
COL6A6-201ENST00000358511 ARHGEF11O15085 1522 aa9.88□□□□□ -0.83
COL6A6-201ENST00000358511 TATP17735 454 aaPredicted RBP9.88□□□□□ -0.83
COL6A6-201ENST00000358511 IGSF22Q8N9C0 903 aa9.88□□□□□ -0.83
COL6A6-201ENST00000358511 RRP15Q9Y3B9 282 aaKnown RBP9.88□□□□□ -0.83
COL6A6-201ENST00000358511 CA8P35219 290 aa9.88□□□□□ -0.83
COL6A6-201ENST00000358511 FYB2Q5VWT5 728 aa9.88□□□□□ -0.83
COL6A6-201ENST00000358511 MFSD6Q6ZSS7 791 aa9.88□□□□□ -0.83
COL6A6-201ENST00000358511 ZBTB9Q96C00 473 aa9.88□□□□□ -0.83
COL6A6-201ENST00000358511 FERMT1Q9BQL6 677 aa9.88□□□□□ -0.83
COL6A6-201ENST00000358511 CCDC174Q6PII3 467 aa9.88□□□□□ -0.83
COL6A6-201ENST00000358511 CROCCP2Q86T23 111 aa9.88□□□□□ -0.83
COL6A6-201ENST00000358511 MAP7Q14244 749 aa9.88□□□□□ -0.83
COL6A6-201ENST00000358511 NEDD9Q14511 834 aa9.88□□□□□ -0.83
COL6A6-201ENST00000358511 PNMA8AQ86V59 439 aaPredicted RBP9.88□□□□□ -0.83
COL6A6-201ENST00000358511 E7EVH7 732 aa9.87□□□□□ -0.83
COL6A6-201ENST00000358511 RASSF2P50749 326 aa9.87□□□□□ -0.83
COL6A6-201ENST00000358511 RAB3IPQ96QF0 476 aaPredicted RBP9.87□□□□□ -0.83
COL6A6-201ENST00000358511 PLCB1Q9NQ66 1216 aa9.87□□□□□ -0.83
COL6A6-201ENST00000358511 INSRP06213 1382 aa9.87□□□□□ -0.83
COL6A6-201ENST00000358511 TTC21BQ7Z4L5 1316 aa9.87□□□□□ -0.83
COL6A6-201ENST00000358511 ARHGAP24Q8N264 748 aa9.87□□□□□ -0.83
COL6A6-201ENST00000358511 LRRC45Q96CN5 670 aa9.87□□□□□ -0.83
COL6A6-201ENST00000358511 SMIM23A6NLE4 172 aa9.87□□□□□ -0.83
COL6A6-201ENST00000358511 RAB3IL1Q8TBN0 382 aa9.87□□□□□ -0.83
COL6A6-201ENST00000358511 DCTPP1Q9H773 170 aa9.87□□□□□ -0.83
COL6A6-201ENST00000358511 ZBTB40Q9NUA8 1239 aa9.87□□□□□ -0.83
COL6A6-201ENST00000358511 SYNRGQ9UMZ2 1314 aa9.87□□□□□ -0.83
COL6A6-201ENST00000358511 KLF18A0A0U1RQI7 1052 aa9.87□□□□□ -0.83
COL6A6-201ENST00000358511 PPFIA3O75145 1194 aa9.87□□□□□ -0.83
COL6A6-201ENST00000358511 SNCBQ16143 134 aa9.87□□□□□ -0.83
COL6A6-201ENST00000358511 TSC1Q92574 1164 aa9.87□□□□□ -0.83
COL6A6-201ENST00000358511 KCNK9Q9NPC2 374 aa9.87□□□□□ -0.83
COL6A6-201ENST00000358511 DBF4Q9UBU7 674 aaPredicted RBP9.87□□□□□ -0.83
COL6A6-201ENST00000358511 MAGI1Q96QZ7 1491 aaPredicted RBP9.87□□□□□ -0.83
COL6A6-201ENST00000358511 ZBTB43O43298 467 aa9.87□□□□□ -0.83
COL6A6-201ENST00000358511 RANBP6O60518 1105 aaKnown RBP9.87□□□□□ -0.83
COL6A6-201ENST00000358511 SPTY2D1Q68D10 685 aaPredicted RBP9.87□□□□□ -0.83
COL6A6-201ENST00000358511 TTC16Q8NEE8 873 aa9.87□□□□□ -0.83
COL6A6-201ENST00000358511 GBP5Q96PP8 586 aa9.87□□□□□ -0.83
COL6A6-201ENST00000358511 TCHPQ9BT92 498 aa9.87□□□□□ -0.83
COL6A6-201ENST00000358511 SLC52A1Q9NWF4 448 aa9.87□□□□□ -0.83
COL6A6-201ENST00000358511 ZNF215Q9UL58 517 aaPredicted RBP9.87□□□□□ -0.83
COL6A6-201ENST00000358511 PRAG1Q86YV5 1406 aa9.87□□□□□ -0.83
COL6A6-201ENST00000358511 RAPGEF6Q8TEU7 1601 aa9.87□□□□□ -0.83
COL6A6-201ENST00000358511 ERCC6LQ2NKX8 1250 aa9.87□□□□□ -0.83
COL6A6-201ENST00000358511 CCDC62Q6P9F0 684 aa9.86□□□□□ -0.83
COL6A6-201ENST00000358511 MCUR1Q96AQ8 359 aa9.86□□□□□ -0.83
COL6A6-201ENST00000358511 COMMD10Q9Y6G5 202 aa9.86□□□□□ -0.83
COL6A6-201ENST00000358511 DNMT1P26358 1616 aaKnown RBP9.86□□□□□ -0.83
COL6A6-201ENST00000358511 ACTN4O43707 911 aaKnown RBP9.86□□□□□ -0.83
COL6A6-201ENST00000358511 PAK2Q13177 524 aa9.86□□□□□ -0.83
COL6A6-201ENST00000358511 CEP120Q8N960 986 aa9.86□□□□□ -0.83
COL6A6-201ENST00000358511 VEZTQ9HBM0 779 aa9.86□□□□□ -0.83
COL6A6-201ENST00000358511 CACNA1FO60840 1977 aa9.86□□□□□ -0.83
COL6A6-201ENST00000358511 POLR3AO14802 1390 aaPredicted RBP9.86□□□□□ -0.83
COL6A6-201ENST00000358511 IGHMBP2P38935 993 aaKnown RBP9.86□□□□□ -0.83
COL6A6-201ENST00000358511 RHPN1Q8TCX5 695 aa9.86□□□□□ -0.83
COL6A6-201ENST00000358511 TMEM63CQ9P1W3 806 aa9.86□□□□□ -0.83
COL6A6-201ENST00000358511 ATP2A2P16615 1042 aaKnown RBP9.86□□□□□ -0.83
COL6A6-201ENST00000358511 TOPBP1Q92547 1522 aa9.86□□□□□ -0.83
COL6A6-201ENST00000358511 MTMR3Q13615 1198 aa9.86□□□□□ -0.83
COL6A6-201ENST00000358511 CALCOCO2Q13137 446 aa9.86□□□□□ -0.83
COL6A6-201ENST00000358511 TRIM4Q9C037 500 aa9.86□□□□□ -0.83
COL6A6-201ENST00000358511 FAM114A2Q9NRY5 505 aa9.86□□□□□ -0.83
COL6A6-201ENST00000358511 USH1CQ9Y6N9 552 aa9.86□□□□□ -0.83
COL6A6-201ENST00000358511 SOS1Q07889 1333 aaPredicted RBP9.86□□□□□ -0.83
COL6A6-201ENST00000358511 PPFIA4O75335 1185 aa9.86□□□□□ -0.83
COL6A6-201ENST00000358511 NBPF7P0C2Y1 421 aaPredicted RBP9.86□□□□□ -0.83
COL6A6-201ENST00000358511 SNAPC4Q5SXM2 1469 aa9.86□□□□□ -0.83
COL6A6-201ENST00000358511 MCMDC2Q4G0Z9 681 aa9.86□□□□□ -0.83
COL6A6-201ENST00000358511 CNNM2Q9H8M5 875 aa9.86□□□□□ -0.83
COL6A6-201ENST00000358511 ABCF2Q9UG63 623 aa9.86□□□□□ -0.83
COL6A6-201ENST00000358511 PPP1R7Q15435 360 aa9.85□□□□□ -0.83
COL6A6-201ENST00000358511 KRT23Q9C075 422 aa9.85□□□□□ -0.83
COL6A6-201ENST00000358511 FANCCQ00597 558 aa9.85□□□□□ -0.83
COL6A6-201ENST00000358511 IFIT5Q13325 482 aaKnown RBP9.85□□□□□ -0.83
COL6A6-201ENST00000358511 GSTA5Q7RTV2 222 aa9.85□□□□□ -0.83
COL6A6-201ENST00000358511 TMTC2Q8N394 836 aa9.85□□□□□ -0.83
COL6A6-201ENST00000358511 ATP8B1O43520 1251 aa9.85□□□□□ -0.83
COL6A6-201ENST00000358511 CCDC25Q86WR0 208 aa9.85□□□□□ -0.83
COL6A6-201ENST00000358511 ZNF622Q969S3 477 aaKnown RBP eCLIP9.85□□□□□ -0.83
COL6A6-201ENST00000358511 CAPS2Q9BXY5 557 aa9.85□□□□□ -0.83
COL6A6-201ENST00000358511 PEX19P40855 299 aa9.85□□□□□ -0.83
COL6A6-201ENST00000358511 RAB11FIP4Q86YS3 637 aa9.85□□□□□ -0.83
COL6A6-201ENST00000358511 CCT6AP40227 531 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms