RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 STIM1Q13586 685 aa7.27□□□□□ -1.25
PRKDC-202ENST00000338368 PPP1R1BQ9UD71 204 aaPredicted RBP7.27□□□□□ -1.25
PRKDC-202ENST00000338368 IL6STP40189 918 aaPredicted RBP7.26□□□□□ -1.25
PRKDC-202ENST00000338368 CEP89Q96ST8 783 aa7.26□□□□□ -1.25
PRKDC-202ENST00000338368 LLPHQ9BRT6 129 aaKnown RBP7.26□□□□□ -1.25
PRKDC-202ENST00000338368 OTUD7BQ6GQQ9 843 aa7.26□□□□□ -1.25
PRKDC-202ENST00000338368 GREM2Q9H772 168 aa7.26□□□□□ -1.25
PRKDC-202ENST00000338368 IQSEC2Q5JU85 1478 aa7.26□□□□□ -1.25
PRKDC-202ENST00000338368 A0A0U1RQG5 324 aaPredicted RBP7.26□□□□□ -1.25
PRKDC-202ENST00000338368 CCP110O43303 1012 aa7.26□□□□□ -1.25
PRKDC-202ENST00000338368 ZNF274Q96GC6 653 aaPredicted RBP7.26□□□□□ -1.25
PRKDC-202ENST00000338368 MROH5Q6ZUA9 1318 aa7.26□□□□□ -1.25
PRKDC-202ENST00000338368 NCAPD2Q15021 1401 aa7.26□□□□□ -1.25
PRKDC-202ENST00000338368 PPFIBP1Q86W92 1011 aa7.26□□□□□ -1.25
PRKDC-202ENST00000338368 CCDC112Q8NEF3 446 aa7.26□□□□□ -1.25
PRKDC-202ENST00000338368 LEO1Q8WVC0 666 aaPredicted RBP7.26□□□□□ -1.25
PRKDC-202ENST00000338368 TRAPPC3LQ5T215 181 aa7.26□□□□□ -1.25
PRKDC-202ENST00000338368 CCDC186Q7Z3E2 898 aa7.26□□□□□ -1.25
PRKDC-202ENST00000338368 ZC3H12CQ9C0D7 883 aaKnown RBP7.26□□□□□ -1.25
PRKDC-202ENST00000338368 MCM9Q9NXL9 1143 aa7.26□□□□□ -1.25
PRKDC-202ENST00000338368 JAK2O60674 1132 aa7.26□□□□□ -1.25
PRKDC-202ENST00000338368 MARCKSP29966 332 aaPredicted RBP7.26□□□□□ -1.25
PRKDC-202ENST00000338368 KIF5BP33176 963 aa7.26□□□□□ -1.25
PRKDC-202ENST00000338368 STX1AQ16623 288 aa7.26□□□□□ -1.25
PRKDC-202ENST00000338368 ZNF622Q969S3 477 aaKnown RBP eCLIP7.26□□□□□ -1.252e-7■□□□□ 9.2
PRKDC-202ENST00000338368 ATG3Q9NT62 314 aa7.26□□□□□ -1.25
PRKDC-202ENST00000338368 SFPQP23246 707 aaKnown RBP eCLIP7.26□□□□□ -1.25
PRKDC-202ENST00000338368 SYKP43405 635 aa7.26□□□□□ -1.25
PRKDC-202ENST00000338368 FAM177A1Q8N128 213 aaPredicted RBP7.26□□□□□ -1.25
PRKDC-202ENST00000338368 CCDC24Q8N4L8 307 aa7.26□□□□□ -1.25
PRKDC-202ENST00000338368 PIGBQ92521 554 aa7.26□□□□□ -1.25
PRKDC-202ENST00000338368 KLHL10Q6JEL2 608 aa7.26□□□□□ -1.25
PRKDC-202ENST00000338368 NLRP10Q86W26 655 aa7.26□□□□□ -1.25
PRKDC-202ENST00000338368 SPATA5Q8NB90 893 aa7.26□□□□□ -1.25
PRKDC-202ENST00000338368 TTC12Q9H892 705 aaPredicted RBP7.26□□□□□ -1.25
PRKDC-202ENST00000338368 ZKSCAN5Q9Y2L8 839 aa7.26□□□□□ -1.25
PRKDC-202ENST00000338368 SPHKAPQ2M3C7 1700 aa7.26□□□□□ -1.25
PRKDC-202ENST00000338368 LOC102724428A0A0B4J2F2 783 aa7.26□□□□□ -1.25
PRKDC-202ENST00000338368 PDE8BO95263 885 aa7.26□□□□□ -1.25
PRKDC-202ENST00000338368 SIK1P57059 783 aa7.26□□□□□ -1.25
PRKDC-202ENST00000338368 RGS12O14924 1447 aa7.25□□□□□ -1.25
PRKDC-202ENST00000338368 FGAP02671 866 aa7.25□□□□□ -1.25
PRKDC-202ENST00000338368 VSIG10Q8N0Z9 540 aa7.25□□□□□ -1.25
PRKDC-202ENST00000338368 AK9Q5TCS8 1911 aa7.25□□□□□ -1.25
PRKDC-202ENST00000338368 PRDM1O75626 825 aa7.25□□□□□ -1.25
PRKDC-202ENST00000338368 SSBP05455 408 aaKnown RBP eCLIP7.25□□□□□ -1.25
PRKDC-202ENST00000338368 MTERF4Q7Z6M4 381 aaKnown RBP7.25□□□□□ -1.25
PRKDC-202ENST00000338368 MAP7D2Q96T17 732 aa7.25□□□□□ -1.25
PRKDC-202ENST00000338368 VAT1LQ9HCJ6 419 aa7.25□□□□□ -1.25
PRKDC-202ENST00000338368 SEC63Q9UGP8 760 aaKnown RBP7.25□□□□□ -1.25
PRKDC-202ENST00000338368 CCDC70Q6NSX1 233 aa7.25□□□□□ -1.25
PRKDC-202ENST00000338368 ZMYM1Q5SVZ6 1142 aa7.25□□□□□ -1.25
PRKDC-202ENST00000338368 CDC37L1Q7L3B6 337 aa7.25□□□□□ -1.25
PRKDC-202ENST00000338368 ARGLU1Q9NWB6 273 aaPredicted RBP7.25□□□□□ -1.25
PRKDC-202ENST00000338368 MYL10Q9BUA6 226 aa7.25□□□□□ -1.25
PRKDC-202ENST00000338368 BMP2KQ9NSY1 1161 aaPredicted RBP7.25□□□□□ -1.25
PRKDC-202ENST00000338368 CIAO1O76071 339 aa7.25□□□□□ -1.25
PRKDC-202ENST00000338368 GPS2Q13227 327 aa7.25□□□□□ -1.25
PRKDC-202ENST00000338368 KANK3Q6NY19 840 aa7.25□□□□□ -1.25
PRKDC-202ENST00000338368 TMOD2Q9NZR1 351 aa7.25□□□□□ -1.25
PRKDC-202ENST00000338368 ANGEL1Q9UNK9 670 aaKnown RBP7.25□□□□□ -1.25
PRKDC-202ENST00000338368 CALM1P0DP23 149 aa7.25□□□□□ -1.25
PRKDC-202ENST00000338368 CALM2P0DP24 149 aa7.25□□□□□ -1.25
PRKDC-202ENST00000338368 CALM3P0DP25 149 aa7.25□□□□□ -1.25
PRKDC-202ENST00000338368 TYRO3Q06418 890 aa7.25□□□□□ -1.25
PRKDC-202ENST00000338368 ZNF804AQ7Z570 1209 aa7.25□□□□□ -1.25
PRKDC-202ENST00000338368 OFD1O75665 1012 aa7.25□□□□□ -1.25
PRKDC-202ENST00000338368 TOP1P11387 765 aaKnown RBP7.25□□□□□ -1.25
PRKDC-202ENST00000338368 RPS8P62241 208 aaKnown RBP7.25□□□□□ -1.25
PRKDC-202ENST00000338368 HS1BP3Q53T59 392 aa7.25□□□□□ -1.25
PRKDC-202ENST00000338368 ZNF830Q96NB3 372 aaPredicted RBP7.25□□□□□ -1.25
PRKDC-202ENST00000338368 UQCRHLA0A096LP55 91 aa7.24□□□□□ -1.25
PRKDC-202ENST00000338368 LDHBP07195 334 aaKnown RBP7.24□□□□□ -1.25
PRKDC-202ENST00000338368 UQCRHP07919 91 aa7.24□□□□□ -1.25
PRKDC-202ENST00000338368 NEURL4Q96JN8 1562 aa7.24□□□□□ -1.25
PRKDC-202ENST00000338368 A0A1B0GVL5 298 aa7.24□□□□□ -1.25
PRKDC-202ENST00000338368 NEMFO60524 1076 aa7.24□□□□□ -1.25
PRKDC-202ENST00000338368 TSPY3P0CV98 308 aa7.24□□□□□ -1.25
PRKDC-202ENST00000338368 TSPY8P0CW00 308 aa7.24□□□□□ -1.25
PRKDC-202ENST00000338368 PICALMQ13492 652 aa7.24□□□□□ -1.25
PRKDC-202ENST00000338368 ZNF589Q86UQ0 364 aaPredicted RBP7.24□□□□□ -1.25
PRKDC-202ENST00000338368 ZHX3Q9H4I2 956 aa7.24□□□□□ -1.25
PRKDC-202ENST00000338368 TFCP2L1Q9NZI6 479 aa7.24□□□□□ -1.25
PRKDC-202ENST00000338368 GOLGA6L1Q8N7Z2 621 aa7.24□□□□□ -1.25
PRKDC-202ENST00000338368 TRIM75PA6NK02 468 aa7.24□□□□□ -1.25
PRKDC-202ENST00000338368 PFKFB2O60825 505 aa7.24□□□□□ -1.25
PRKDC-202ENST00000338368 AOPEPQ8N6M6 819 aa7.24□□□□□ -1.25
PRKDC-202ENST00000338368 BMP15O95972 392 aa7.24□□□□□ -1.25
PRKDC-202ENST00000338368 KRI1Q8N9T8 703 aaKnown RBP7.24□□□□□ -1.25
PRKDC-202ENST00000338368 CAMSAP1Q5T5Y3 1602 aa7.24□□□□□ -1.25
PRKDC-202ENST00000338368 UBA7P41226 1012 aa7.24□□□□□ -1.25
PRKDC-202ENST00000338368 CCDC96Q2M329 555 aa7.24□□□□□ -1.25
PRKDC-202ENST00000338368 GAS2L3Q86XJ1 694 aa7.24□□□□□ -1.25
PRKDC-202ENST00000338368 ZNHIT6Q9NWK9 470 aaKnown RBP7.24□□□□□ -1.25
PRKDC-202ENST00000338368 MTMR6Q9Y217 621 aa7.24□□□□□ -1.25
PRKDC-202ENST00000338368 PDE6AP16499 860 aa7.24□□□□□ -1.25
PRKDC-202ENST00000338368 JAG2Q9Y219 1238 aa7.24□□□□□ -1.25
PRKDC-202ENST00000338368 F8W031 263 aaPredicted RBP7.24□□□□□ -1.25
PRKDC-202ENST00000338368 DIS3L2Q8IYB7 885 aaKnown RBP7.24□□□□□ -1.25
PRKDC-202ENST00000338368 CACNA1FO60840 1977 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms