RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 GJA5P36382 358 aa16.81■□□□□ 0.28
SGCA-201ENST00000262018 CCDC152Q4G0S7 254 aa16.81■□□□□ 0.28
SGCA-201ENST00000262018 STRIP1Q5VSL9 837 aa16.81■□□□□ 0.28
SGCA-201ENST00000262018 PTPN18Q99952 460 aa16.81■□□□□ 0.28
SGCA-201ENST00000262018 DEFB129Q9H1M3 183 aa16.81■□□□□ 0.28
SGCA-201ENST00000262018 BRCA2P51587 3418 aa16.81■□□□□ 0.28
SGCA-201ENST00000262018 KIAA0825Q8IV33 1275 aa16.8■□□□□ 0.28
SGCA-201ENST00000262018 ANKRD18AQ8IVF6 992 aa16.8■□□□□ 0.28
SGCA-201ENST00000262018 EXOC6Q8TAG9 804 aa16.8■□□□□ 0.28
SGCA-201ENST00000262018 SH3TC2Q8TF17 1288 aa16.8■□□□□ 0.28
SGCA-201ENST00000262018 HSP90B1P14625 803 aaKnown RBP16.79■□□□□ 0.28
SGCA-201ENST00000262018 MNX1P50219 401 aaPredicted RBP16.79■□□□□ 0.28
SGCA-201ENST00000262018 KRT24Q2M2I5 525 aa16.79■□□□□ 0.28
SGCA-201ENST00000262018 MBIPQ9NS73 344 aa16.79■□□□□ 0.28
SGCA-201ENST00000262018 MMP14P50281 582 aa16.79■□□□□ 0.28
SGCA-201ENST00000262018 TRIM28Q13263 835 aaKnown RBP16.79■□□□□ 0.28
SGCA-201ENST00000262018 ZBTB38Q8NAP3 1195 aaPredicted RBP16.79■□□□□ 0.28
SGCA-201ENST00000262018 ZBED3Q96IU2 234 aaPredicted RBP16.79■□□□□ 0.28
SGCA-201ENST00000262018 MED23Q9ULK4 1368 aa16.78■□□□□ 0.28
SGCA-201ENST00000262018 COL1A1P02452 1464 aaPredicted RBP16.78■□□□□ 0.28
SGCA-201ENST00000262018 SSC5DA1L4H1 1573 aa16.78■□□□□ 0.28
SGCA-201ENST00000262018 TESPA1A2RU30 521 aaPredicted RBP16.78■□□□□ 0.28
SGCA-201ENST00000262018 UNCXA6NJT0 531 aa16.78■□□□□ 0.28
SGCA-201ENST00000262018 PRO3102Q9H379 93 aa16.78■□□□□ 0.28
SGCA-201ENST00000262018 A0A0C4DFX4 3053 aa16.77■□□□□ 0.27
SGCA-201ENST00000262018 IREB2P48200 963 aaKnown RBP16.77■□□□□ 0.27
SGCA-201ENST00000262018 TAF1CQ15572 869 aaPredicted RBP16.77■□□□□ 0.27
SGCA-201ENST00000262018 SUPT20HL1Q3ZLR7 823 aa16.77■□□□□ 0.27
SGCA-201ENST00000262018 C20orf194Q5TEA3 1177 aa16.77■□□□□ 0.27
SGCA-201ENST00000262018 HDGFL1Q5TGJ6 251 aa16.77■□□□□ 0.27
SGCA-201ENST00000262018 TTLL5Q6EMB2 1281 aa16.77■□□□□ 0.27
SGCA-201ENST00000262018 JARID2Q92833 1246 aaPredicted RBP16.77■□□□□ 0.27
SGCA-201ENST00000262018 CRBNQ96SW2 442 aa16.77■□□□□ 0.27
SGCA-201ENST00000262018 COA1Q9GZY4 146 aa16.77■□□□□ 0.27
SGCA-201ENST00000262018 ZFYVE28Q9HCC9 887 aa16.77■□□□□ 0.27
SGCA-201ENST00000262018 PDE8AO60658 829 aa16.76■□□□□ 0.27
SGCA-201ENST00000262018 PDE3AQ14432 1141 aa16.76■□□□□ 0.27
SGCA-201ENST00000262018 DLGAP5Q15398 846 aa16.76■□□□□ 0.27
SGCA-201ENST00000262018 SHISA4Q96DD7 197 aa16.76■□□□□ 0.27
SGCA-201ENST00000262018 PPP2R3BQ9Y5P8 575 aa16.76■□□□□ 0.27
SGCA-201ENST00000262018 LAMB1P07942 1786 aa16.76■□□□□ 0.27
SGCA-201ENST00000262018 SOX1O00570 391 aaPredicted RBP16.75■□□□□ 0.27
SGCA-201ENST00000262018 NBPF12Q5TAG4 269 aaPredicted RBP16.75■□□□□ 0.27
SGCA-201ENST00000262018 ANKRD13AQ8IZ07 590 aa16.75■□□□□ 0.27
SGCA-201ENST00000262018 HTATIP2Q9BUP3 242 aa16.75■□□□□ 0.27
SGCA-201ENST00000262018 ELP3Q9H9T3 547 aa16.75■□□□□ 0.27
SGCA-201ENST00000262018 DBF4Q9UBU7 674 aaPredicted RBP16.75■□□□□ 0.27
SGCA-201ENST00000262018 RANBP2P49792 3224 aaKnown RBP16.74■□□□□ 0.27
SGCA-201ENST00000262018 USP2O75604 605 aaPredicted RBP16.74■□□□□ 0.27
SGCA-201ENST00000262018 CCT4P50991 539 aaKnown RBP16.74■□□□□ 0.27
SGCA-201ENST00000262018 GTF2IP78347 998 aa16.74■□□□□ 0.27
SGCA-201ENST00000262018 ALDH1L2Q3SY69 923 aa16.74■□□□□ 0.27
SGCA-201ENST00000262018 B4GALNT3Q6L9W6 998 aa16.74■□□□□ 0.27
SGCA-201ENST00000262018 RIC3Q7Z5B4 369 aa16.74■□□□□ 0.27
SGCA-201ENST00000262018 TXNRD3Q86VQ6 643 aa16.74■□□□□ 0.27
SGCA-201ENST00000262018 OPTNQ96CV9 577 aa16.74■□□□□ 0.27
SGCA-201ENST00000262018 LRCH3Q96II8 777 aa16.74■□□□□ 0.27
SGCA-201ENST00000262018 MINPP1Q9UNW1 487 aa16.74■□□□□ 0.27
SGCA-201ENST00000262018 NR2E3Q9Y5X4 410 aa16.74■□□□□ 0.27
SGCA-201ENST00000262018 ZNF646O15015 1829 aaPredicted RBP16.74■□□□□ 0.27
SGCA-201ENST00000262018 CLRN2A0PK11 232 aa16.73■□□□□ 0.27
SGCA-201ENST00000262018 HOXB7P09629 217 aa16.73■□□□□ 0.27
SGCA-201ENST00000262018 KIF22Q14807 665 aa16.73■□□□□ 0.27
SGCA-201ENST00000262018 MTFR1Q15390 333 aa16.73■□□□□ 0.27
SGCA-201ENST00000262018 BRI3BPQ8WY22 251 aa16.73■□□□□ 0.27
SGCA-201ENST00000262018 MS4A4AQ96JQ5 239 aa16.73■□□□□ 0.27
SGCA-201ENST00000262018 CDC5LQ99459 802 aaKnown RBP16.73■□□□□ 0.27
SGCA-201ENST00000262018 ARHGAP39Q9C0H5 1083 aa16.73■□□□□ 0.27
SGCA-201ENST00000262018 ZNF804BA4D1E1 1349 aa16.73■□□□□ 0.27
SGCA-201ENST00000262018 CCL15-CCL14A0A0B4J2E2 113 aa16.72■□□□□ 0.27
SGCA-201ENST00000262018 VAMP4O75379 141 aa16.72■□□□□ 0.27
SGCA-201ENST00000262018 PCCAP05165 728 aaPredicted RBP16.72■□□□□ 0.27
SGCA-201ENST00000262018 CCL15Q16663 113 aa16.72■□□□□ 0.27
SGCA-201ENST00000262018 MYD88Q99836 296 aa16.72■□□□□ 0.27
SGCA-201ENST00000262018 VEZTQ9HBM0 779 aa16.72■□□□□ 0.27
SGCA-201ENST00000262018 HYPKQ9NX55 129 aa16.72■□□□□ 0.27
SGCA-201ENST00000262018 PCDHAC2Q9Y5I4 1007 aa16.72■□□□□ 0.27
SGCA-201ENST00000262018 ZBTB7BO15156 539 aaPredicted RBP16.71■□□□□ 0.27
SGCA-201ENST00000262018 ECM2O94769 699 aaPredicted RBP16.71■□□□□ 0.27
SGCA-201ENST00000262018 SSH1Q8WYL5 1049 aa16.71■□□□□ 0.27
SGCA-201ENST00000262018 CCDC136Q96JN2 1154 aa16.71■□□□□ 0.27
SGCA-201ENST00000262018 BSDC1Q9NW68 430 aaPredicted RBP16.71■□□□□ 0.27
SGCA-201ENST00000262018 A0A1W2PPC1 479 aa16.7■□□□□ 0.26
SGCA-201ENST00000262018 MYO1BO43795 1136 aa16.7■□□□□ 0.26
SGCA-201ENST00000262018 FAM43AQ8N2R8 423 aa16.7■□□□□ 0.26
SGCA-201ENST00000262018 NKX2-3Q8TAU0 364 aa16.7■□□□□ 0.26
SGCA-201ENST00000262018 CNKSR2Q8WXI2 1034 aa16.7■□□□□ 0.26
SGCA-201ENST00000262018 SMC4Q9NTJ3 1288 aa16.7■□□□□ 0.26
SGCA-201ENST00000262018 COL6A3P12111 3177 aa16.7■□□□□ 0.26
SGCA-201ENST00000262018 WDHD1O75717 1129 aaPredicted RBP16.7■□□□□ 0.26
SGCA-201ENST00000262018 GTF2A2P52657 109 aa16.7■□□□□ 0.26
SGCA-201ENST00000262018 LACTBP83111 547 aaPredicted RBP16.7■□□□□ 0.26
SGCA-201ENST00000262018 TSPYL6Q8N831 410 aa16.7■□□□□ 0.26
SGCA-201ENST00000262018 MTMR14Q8NCE2 650 aa16.7■□□□□ 0.26
SGCA-201ENST00000262018 CCDC191Q8NCU4 936 aa16.7■□□□□ 0.26
SGCA-201ENST00000262018 FRAT1Q92837 279 aaPredicted RBP16.7■□□□□ 0.26
SGCA-201ENST00000262018 CHMP4AQ9BY43 222 aa16.7■□□□□ 0.26
SGCA-201ENST00000262018 F8W031 263 aaPredicted RBP16.69■□□□□ 0.26
SGCA-201ENST00000262018 KLRK1P26718 216 aa16.69■□□□□ 0.26
SGCA-201ENST00000262018 PRMT2P55345 433 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms