RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 ORC3Q9UBD5 711 aaPredicted RBP4.91□□□□□ -1.62
VPS13C-202ENST00000261517 USP16Q9Y5T5 823 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 ESPNB1AK53 854 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 RANBP6O60518 1105 aaKnown RBP4.91□□□□□ -1.62
VPS13C-202ENST00000261517 PDE8AO60658 829 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 TSPY3P0CV98 308 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 TSPY8P0CW00 308 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 ZBTB40Q9NUA8 1239 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 EXOC6BQ9Y2D4 811 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 H0YHG0 523 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 GOLGA5Q8TBA6 731 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 NUP58Q9BVL2 599 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 MIS12Q9H081 205 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 SLC5A4Q9NY91 659 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 CEP83Q9Y592 693 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 FAM200AQ8TCP9 573 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 TSKSQ9UJT2 592 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 KIF20BQ96Q89 1820 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 SENP3-EIF4A1A0A087X0R7 540 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 CIAO1O76071 339 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 ACTN2P35609 894 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 MMP14P50281 582 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 ARHGEF6Q15052 776 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 MPRIPQ6WCQ1 1025 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 MRPS27Q92552 414 aaKnown RBP4.91□□□□□ -1.62
VPS13C-202ENST00000261517 EXOC7Q9UPT5 735 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 PTCH1Q13635 1447 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 MAGEB6P1A0A0J9YX57 407 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 CCDC14Q49A88 953 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 CCDC82Q8N4S0 544 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 ARHGEF10LQ9HCE6 1279 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 SMC1AQ14683 1233 aaKnown RBP4.91□□□□□ -1.62
VPS13C-202ENST00000261517 CEP112Q8N8E3 955 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 SLC52A2Q9HAB3 445 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 CLIP2Q9UDT6 1046 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 DYNC1I1O14576 645 aa4.9□□□□□ -1.62
VPS13C-202ENST00000261517 TEX2Q8IWB9 1127 aa4.9□□□□□ -1.62
VPS13C-202ENST00000261517 TTC14Q96N46 770 aa4.9□□□□□ -1.62
VPS13C-202ENST00000261517 DSCC1Q9BVC3 393 aa4.9□□□□□ -1.62
VPS13C-202ENST00000261517 TPCN1Q9ULQ1 816 aa4.9□□□□□ -1.62
VPS13C-202ENST00000261517 ATP2A1O14983 1001 aa4.9□□□□□ -1.62
VPS13C-202ENST00000261517 GNA14O95837 355 aa4.9□□□□□ -1.62
VPS13C-202ENST00000261517 KRT2P35908 639 aa4.9□□□□□ -1.62
VPS13C-202ENST00000261517 YWHAEP62258 255 aaKnown RBP4.9□□□□□ -1.62
VPS13C-202ENST00000261517 TMCO3Q6UWJ1 677 aa4.9□□□□□ -1.62
VPS13C-202ENST00000261517 IQUBQ8NA54 791 aa4.9□□□□□ -1.62
VPS13C-202ENST00000261517 RGS22Q8NE09 1264 aa4.9□□□□□ -1.62
VPS13C-202ENST00000261517 TULP4Q9NRJ4 1543 aa4.9□□□□□ -1.62
VPS13C-202ENST00000261517 ELP1O95163 1332 aa4.9□□□□□ -1.62
VPS13C-202ENST00000261517 SHTN1A0MZ66 631 aa4.9□□□□□ -1.62
VPS13C-202ENST00000261517 SYKP43405 635 aa4.9□□□□□ -1.62
VPS13C-202ENST00000261517 IMPACTQ9P2X3 320 aa4.9□□□□□ -1.62
VPS13C-202ENST00000261517 E9PCH4 1651 aa4.9□□□□□ -1.62
VPS13C-202ENST00000261517 ATP6V1AP38606 617 aa4.9□□□□□ -1.62
VPS13C-202ENST00000261517 MTA3Q9BTC8 594 aa4.9□□□□□ -1.62
VPS13C-202ENST00000261517 BOLA2Q9H3K6 86 aa4.9□□□□□ -1.62
VPS13C-202ENST00000261517 LCMT1Q9UIC8 334 aa4.9□□□□□ -1.62
VPS13C-202ENST00000261517 KDM3AQ9Y4C1 1321 aa4.9□□□□□ -1.62
VPS13C-202ENST00000261517 MYL1P05976 194 aa4.9□□□□□ -1.62
VPS13C-202ENST00000261517 IL13P35225 146 aa4.9□□□□□ -1.62
VPS13C-202ENST00000261517 CNGA4Q8IV77 575 aa4.9□□□□□ -1.62
VPS13C-202ENST00000261517 NFATC2IPQ8NCF5 419 aa4.9□□□□□ -1.62
VPS13C-202ENST00000261517 JDP2Q8WYK2 163 aa4.9□□□□□ -1.62
VPS13C-202ENST00000261517 CCDC77Q9BR77 488 aa4.9□□□□□ -1.62
VPS13C-202ENST00000261517 OVOS2A0A0G2JMS6 1433 aa4.9□□□□□ -1.63
VPS13C-202ENST00000261517 DEXIO95424 95 aa4.9□□□□□ -1.63
VPS13C-202ENST00000261517 MATR3P43243 847 aaKnown RBP eCLIP4.9□□□□□ -1.63
VPS13C-202ENST00000261517 SPECC1LQ69YQ0 1117 aa4.9□□□□□ -1.63
VPS13C-202ENST00000261517 HS2ST1Q7LGA3 356 aa4.9□□□□□ -1.63
VPS13C-202ENST00000261517 NUTM2BA6NNL0 878 aaPredicted RBP4.9□□□□□ -1.63
VPS13C-202ENST00000261517 NUTM2EB1AL46 878 aaPredicted RBP4.9□□□□□ -1.63
VPS13C-202ENST00000261517 LAD1O00515 517 aa4.9□□□□□ -1.63
VPS13C-202ENST00000261517 ATP5DP30049 168 aa4.9□□□□□ -1.63
VPS13C-202ENST00000261517 NUTM2AQ8IVF1 878 aaPredicted RBP4.9□□□□□ -1.63
VPS13C-202ENST00000261517 FSIP1Q8NA03 581 aa4.9□□□□□ -1.63
VPS13C-202ENST00000261517 PPM1EQ8WY54 764 aa4.9□□□□□ -1.63
VPS13C-202ENST00000261517 GOPCQ9HD26 462 aa4.9□□□□□ -1.63
VPS13C-202ENST00000261517 SPDYE3A6NKU9 549 aa4.9□□□□□ -1.63
VPS13C-202ENST00000261517 PER1O15534 1290 aaPredicted RBP4.9□□□□□ -1.63
VPS13C-202ENST00000261517 GBP1P32455 592 aa4.9□□□□□ -1.63
VPS13C-202ENST00000261517 XAGE3Q8WTP9 111 aa4.9□□□□□ -1.63
VPS13C-202ENST00000261517 C1orf115Q9H7X2 142 aa4.9□□□□□ -1.63
VPS13C-202ENST00000261517 SLC26A4O43511 780 aa4.9□□□□□ -1.63
VPS13C-202ENST00000261517 VAMP4O75379 141 aa4.9□□□□□ -1.63
VPS13C-202ENST00000261517 LDHBP07195 334 aaKnown RBP4.9□□□□□ -1.63
VPS13C-202ENST00000261517 RCAN1P53805 252 aa4.9□□□□□ -1.63
VPS13C-202ENST00000261517 APOBRQ0VD83 1088 aa4.9□□□□□ -1.63
VPS13C-202ENST00000261517 CEP85Q6P2H3 762 aa4.9□□□□□ -1.63
VPS13C-202ENST00000261517 DZIP3Q86Y13 1208 aaKnown RBP4.9□□□□□ -1.63
VPS13C-202ENST00000261517 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.9□□□□□ -1.63
VPS13C-202ENST00000261517 NSRP1Q9H0G5 558 aaKnown RBP4.9□□□□□ -1.63
VPS13C-202ENST00000261517 LMOD1P29536 600 aaPredicted RBP4.89□□□□□ -1.63
VPS13C-202ENST00000261517 FAM193AP78312 1265 aa4.89□□□□□ -1.63
VPS13C-202ENST00000261517 AXDND1Q5T1B0 1012 aaPredicted RBP4.89□□□□□ -1.63
VPS13C-202ENST00000261517 VSIG10Q8N0Z9 540 aa4.89□□□□□ -1.63
VPS13C-202ENST00000261517 ZC3H12CQ9C0D7 883 aaKnown RBP4.89□□□□□ -1.63
VPS13C-202ENST00000261517 CUEDC2Q9H467 287 aa4.89□□□□□ -1.63
VPS13C-202ENST00000261517 LRSAM1Q6UWE0 723 aa4.89□□□□□ -1.63
VPS13C-202ENST00000261517 LPIN2Q92539 896 aa4.89□□□□□ -1.63
VPS13C-202ENST00000261517 RNF216Q9NWF9 866 aaPredicted RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms