RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Map9Q3TRR0 646 aa10.13□□□□□ -0.79
Trim39-205ENSMUST00000173369 Brf1Q8CFK2 676 aa10.13□□□□□ -0.79
Trim39-205ENSMUST00000173369 Uba5Q8VE47 403 aa10.13□□□□□ -0.79
Trim39-205ENSMUST00000173369 Cacnb3P54285 484 aa10.12□□□□□ -0.79
Trim39-205ENSMUST00000173369 Nom1Q3UFM5 854 aaKnown RBP10.12□□□□□ -0.79
Trim39-205ENSMUST00000173369 Ube3cQ80U95 1083 aa10.12□□□□□ -0.79
Trim39-205ENSMUST00000173369 Rbbp8nlA2ABX0 614 aa10.12□□□□□ -0.79
Trim39-205ENSMUST00000173369 Glt1d1A4FUP9 346 aa10.12□□□□□ -0.79
Trim39-205ENSMUST00000173369 Usp17lbE9Q9U0 468 aa10.12□□□□□ -0.79
Trim39-205ENSMUST00000173369 Znf697Q569E7 569 aa10.12□□□□□ -0.79
Trim39-205ENSMUST00000173369 Vil1Q62468 827 aa10.12□□□□□ -0.79
Trim39-205ENSMUST00000173369 Smc5Q8CG46 1101 aaKnown RBP10.12□□□□□ -0.79
Trim39-205ENSMUST00000173369 Krt25Q8VCW2 446 aa10.12□□□□□ -0.79
Trim39-205ENSMUST00000173369 Ly6iQ9WU67 134 aa10.12□□□□□ -0.79
Trim39-205ENSMUST00000173369 Heg1E9Q7X6 1337 aa10.12□□□□□ -0.79
Trim39-205ENSMUST00000173369 Myo3bQ1EG27 1305 aa10.12□□□□□ -0.79
Trim39-205ENSMUST00000173369 Nphp3Q7TNH6 1325 aa10.11□□□□□ -0.79
Trim39-205ENSMUST00000173369 TraipQ8VIG6 470 aa10.11□□□□□ -0.79
Trim39-205ENSMUST00000173369 Kif18aQ91WD7 886 aa10.11□□□□□ -0.79
Trim39-205ENSMUST00000173369 Tbc1d7Q9D0K0 293 aa10.11□□□□□ -0.79
Trim39-205ENSMUST00000173369 Ercc3P49135 783 aa10.11□□□□□ -0.79
Trim39-205ENSMUST00000173369 Pdzrn3Q69ZS0 1063 aa10.11□□□□□ -0.79
Trim39-205ENSMUST00000173369 Taf5lQ91WQ5 589 aa10.11□□□□□ -0.79
Trim39-205ENSMUST00000173369 Stk32bQ9JJX8 414 aa10.11□□□□□ -0.79
Trim39-205ENSMUST00000173369 Map3k12Q60700 888 aa10.1□□□□□ -0.79
Trim39-205ENSMUST00000173369 Lmbrd2Q8C561 694 aa10.1□□□□□ -0.79
Trim39-205ENSMUST00000173369 Setdb1O88974 1307 aa10.1□□□□□ -0.79
Trim39-205ENSMUST00000173369 Brd1E9PZ26 1189 aaKnown RBP10.1□□□□□ -0.79
Trim39-205ENSMUST00000173369 Dhx16G3X8X0 1044 aaKnown RBP10.1□□□□□ -0.79
Trim39-205ENSMUST00000173369 LifrP42703 1092 aa10.1□□□□□ -0.79
Trim39-205ENSMUST00000173369 Dpf2Q61103 391 aaKnown RBP10.1□□□□□ -0.79
Trim39-205ENSMUST00000173369 Q9D2X8 372 aa10.1□□□□□ -0.79
Trim39-205ENSMUST00000173369 Stag1Q9D3E6 1258 aa10.1□□□□□ -0.79
Trim39-205ENSMUST00000173369 Jag1Q9QXX0 1218 aa10.1□□□□□ -0.79
Trim39-205ENSMUST00000173369 Mroh6V9GX81 722 aa10.1□□□□□ -0.79
Trim39-205ENSMUST00000173369 Kdm3aQ6PCM1 1323 aa10.1□□□□□ -0.79
Trim39-205ENSMUST00000173369 Chrm1P12657 460 aa10.1□□□□□ -0.79
Trim39-205ENSMUST00000173369 GmpsQ3THK7 693 aa10.1□□□□□ -0.79
Trim39-205ENSMUST00000173369 Rimbp2Q80U40 1072 aa10.1□□□□□ -0.79
Trim39-205ENSMUST00000173369 Itgb4A2A863 1818 aa10.1□□□□□ -0.79
Trim39-205ENSMUST00000173369 Carmil3Q3UFQ8 1375 aa10.09□□□□□ -0.79
Trim39-205ENSMUST00000173369 Krt24A1L317 512 aa10.09□□□□□ -0.79
Trim39-205ENSMUST00000173369 Izumo3A6PWV3 263 aa10.09□□□□□ -0.79
Trim39-205ENSMUST00000173369 Eif6O55135 245 aa10.09□□□□□ -0.79
Trim39-205ENSMUST00000173369 Ankrd13aQ80UP5 588 aa10.09□□□□□ -0.79
Trim39-205ENSMUST00000173369 RabggtaQ9JHK4 567 aa10.09□□□□□ -0.79
Trim39-205ENSMUST00000173369 NinQ61043 2035 aa10.09□□□□□ -0.79
Trim39-205ENSMUST00000173369 A0A1W2P7S8 802 aa10.09□□□□□ -0.79
Trim39-205ENSMUST00000173369 Washc4Q3UMB9 1173 aa10.09□□□□□ -0.79
Trim39-205ENSMUST00000173369 Ppm1gQ61074 542 aa10.09□□□□□ -0.79
Trim39-205ENSMUST00000173369 Cdc5lQ6A068 802 aaKnown RBP10.09□□□□□ -0.79
Trim39-205ENSMUST00000173369 Ddx31Q6NZQ2 687 aaKnown RBP10.09□□□□□ -0.79
Trim39-205ENSMUST00000173369 Wdr43Q6ZQL4 677 aaKnown RBP10.09□□□□□ -0.79
Trim39-205ENSMUST00000173369 Ccdc93Q7TQK5 629 aa10.09□□□□□ -0.79
Trim39-205ENSMUST00000173369 Tmem67Q8BR76 992 aa10.09□□□□□ -0.79
Trim39-205ENSMUST00000173369 Tmem266Q8BZB3 538 aa10.09□□□□□ -0.79
Trim39-205ENSMUST00000173369 PdgfdQ925I7 370 aa10.09□□□□□ -0.79
Trim39-205ENSMUST00000173369 IcoslgQ9JHJ8 322 aa10.09□□□□□ -0.79
Trim39-205ENSMUST00000173369 Ltn1Q6A009 1767 aa10.09□□□□□ -0.79
Trim39-205ENSMUST00000173369 Lama3Q61789 3330 aa10.08□□□□□ -0.8
Trim39-205ENSMUST00000173369 Cfap69Q8BH53 942 aa10.08□□□□□ -0.8
Trim39-205ENSMUST00000173369 Nup188Q6ZQH8 1759 aa10.08□□□□□ -0.8
Trim39-205ENSMUST00000173369 Myh4Q5SX39 1939 aa10.08□□□□□ -0.8
Trim39-205ENSMUST00000173369 Mast3Q3U214 1321 aa10.08□□□□□ -0.8
Trim39-205ENSMUST00000173369 Col3a1P08121 1464 aa10.08□□□□□ -0.8
Trim39-205ENSMUST00000173369 Mex3cQ05A36 652 aaKnown RBP10.08□□□□□ -0.8
Trim39-205ENSMUST00000173369 Q3UJP5 209 aa10.08□□□□□ -0.8
Trim39-205ENSMUST00000173369 Wwc1Q5SXA9 1104 aa10.08□□□□□ -0.8
Trim39-205ENSMUST00000173369 Ak7Q9D2H2 614 aa10.08□□□□□ -0.8
Trim39-205ENSMUST00000173369 Nup98Q6PFD9 1816 aaKnown RBP10.07□□□□□ -0.8
Trim39-205ENSMUST00000173369 AU015836B2RUM3 263 aa10.07□□□□□ -0.8
Trim39-205ENSMUST00000173369 Gm3893E9Q1I1 302 aa10.07□□□□□ -0.8
Trim39-205ENSMUST00000173369 Stat5bP42232 786 aa10.07□□□□□ -0.8
Trim39-205ENSMUST00000173369 Fam170aQ66LM6 333 aa10.07□□□□□ -0.8
Trim39-205ENSMUST00000173369 Edrf1Q6GQV7 1239 aa10.07□□□□□ -0.8
Trim39-205ENSMUST00000173369 ParnQ8VDG3 624 aa10.07□□□□□ -0.8
Trim39-205ENSMUST00000173369 Cyp3a57D3YYZ0 503 aa10.07□□□□□ -0.8
Trim39-205ENSMUST00000173369 Hsp90b1P08113 802 aaKnown RBP10.07□□□□□ -0.8
Trim39-205ENSMUST00000173369 Prl3d1P18121 224 aa10.07□□□□□ -0.8
Trim39-205ENSMUST00000173369 Siah1aP61092 282 aa10.07□□□□□ -0.8
Trim39-205ENSMUST00000173369 Fam160b2Q80YR2 744 aa10.07□□□□□ -0.8
Trim39-205ENSMUST00000173369 Aldh8a1Q8BH00 487 aa10.07□□□□□ -0.8
Trim39-205ENSMUST00000173369 Trmt44Q9D2Q2 713 aa10.07□□□□□ -0.8
Trim39-205ENSMUST00000173369 Tmem79Q9D709 391 aa10.07□□□□□ -0.8
Trim39-205ENSMUST00000173369 Nek4Q9Z1J2 792 aa10.07□□□□□ -0.8
Trim39-205ENSMUST00000173369 Lbhd1A0A087WPA0 259 aa10.06□□□□□ -0.8
Trim39-205ENSMUST00000173369 Trim30dE9PWL0 497 aa10.06□□□□□ -0.8
Trim39-205ENSMUST00000173369 Tuft1O08970 390 aa10.06□□□□□ -0.8
Trim39-205ENSMUST00000173369 Irf5P56477 497 aa10.06□□□□□ -0.8
Trim39-205ENSMUST00000173369 Spg7Q3ULF4 781 aa10.06□□□□□ -0.8
Trim39-205ENSMUST00000173369 Trim56Q80VI1 734 aaKnown RBP10.06□□□□□ -0.8
Trim39-205ENSMUST00000173369 RestQ8VIG1 1082 aa10.06□□□□□ -0.8
Trim39-205ENSMUST00000173369 Gcc1Q9D4H2 778 aa10.06□□□□□ -0.8
Trim39-205ENSMUST00000173369 Prss40A6H6T1 365 aa10.06□□□□□ -0.8
Trim39-205ENSMUST00000173369 Ifi207E9Q3L4 978 aa10.06□□□□□ -0.8
Trim39-205ENSMUST00000173369 Mdm2P23804 489 aa10.06□□□□□ -0.8
Trim39-205ENSMUST00000173369 Dynll1P63168 89 aa10.06□□□□□ -0.8
Trim39-205ENSMUST00000173369 Bach1P97302 739 aa10.06□□□□□ -0.8
Trim39-205ENSMUST00000173369 Spata18Q0P557 537 aa10.06□□□□□ -0.8
Trim39-205ENSMUST00000173369 Gm2163Q6PCY5 473 aa10.06□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 47.4 ms