RNA–Protein interactions for RNA: ENSMUST00000167415.7

Gt(ROSA)26Sor-204, mousemouse

TSL 1 (best) BASIC

Gene Gt(ROSA)26Sor, Length 551 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gt(ROSA)26Sor-204ENSMUST00000167415 PdgfdQ925I7 370 aa4.8□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Ap3b2Q9JME5 1082 aa4.8□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 StrcQ8VIM6 1809 aa4.79□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Zfp646Q6NV66 1788 aa4.79□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Sipa1l1Q8C0T5 1782 aa4.79□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Ampd3O08739 766 aa4.79□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 P01644 108 aa4.79□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Rrm1P07742 792 aa4.79□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Defa-rs1P17533 116 aa4.79□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Neurod6P48986 337 aa4.79□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Epb42P49222 691 aa4.79□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 EvlP70429 414 aa4.79□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Rc3h1Q4VGL6 1130 aaKnown RBP4.79□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 PtprnQ60673 979 aa4.79□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Fhod1Q6P9Q4 1197 aa4.79□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Methig1Q76I26 264 aa4.79□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Ubp1Q811S7 540 aa4.79□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Cabp4Q8VHC5 271 aa4.79□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Taf1dQ9D4V4 322 aa4.79□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Nr1h3Q9Z0Y9 445 aa4.79□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Col11a2Q64739 1736 aa4.79□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Rfx7F8VPJ6 1459 aa4.79□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Plch1Q4KWH5 1682 aa4.79□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Adamts13Q769J6 1426 aa4.79□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 FancaQ9JL70 1439 aa4.79□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Sos2Q02384 1333 aa4.78□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Dhx8A2A4P0 1244 aaKnown RBP4.78□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Fyb2A2A995 729 aa4.78□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 1700018F24RikB2RW27 314 aa4.78□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Klrk1O54709 232 aa4.78□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Gna15P30678 374 aa4.78□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Atp6v1aP50516 617 aaKnown RBP4.78□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Vps33bP59016 617 aa4.78□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Kcnma1Q08460 1209 aa4.78□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 VgfQ0VGU4 617 aa4.78□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Ttll12Q3UDE2 639 aa4.78□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Washc4Q3UMB9 1173 aa4.78□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Ccdc27Q3V036 639 aa4.78□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Npdc1Q64322 332 aa4.78□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Ankrd13dQ6PD24 605 aa4.78□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Ppm1eQ80TL0 749 aa4.78□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Micall1Q8BGT6 870 aa4.78□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Clec4gQ8BNX1 294 aa4.78□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Bend7Q8BSV3 434 aa4.78□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Trim47Q8C0E3 641 aa4.78□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Traf3ip2Q8N7N6 555 aa4.78□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Gripap1Q8VD04 806 aa4.78□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Clp1Q99LI9 425 aa4.78□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Clstn2Q9ER65 966 aa4.78□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Gdpd2Q9ESM6 539 aa4.78□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Cd2apQ9JLQ0 637 aa4.78□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 ChmQ9QXG2 665 aa4.78□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Mapk8ip1Q9WVI9 707 aa4.78□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Lama3Q61789 3330 aa4.78□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Scn11aQ9R053 1765 aa4.78□□□□□ -1.64
Gt(ROSA)26Sor-204ENSMUST00000167415 Ubr3Q5U430 1889 aa4.77□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Sbno2Q7TNB8 1349 aa4.77□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Col4a5Q63ZW6 1691 aa4.77□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Gm21083A0A0G2JFD5 256 aa4.77□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Gm21149A0A0G2JFY7 255 aa4.77□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 1700011I03RikE9PYL8 271 aa4.77□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Speer4cG3UXD1 256 aa4.77□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Cyp2c68K7N6C2 491 aa4.77□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Gm17019K7N6W5 255 aa4.77□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Msx1P13297 303 aa4.77□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Stat1P42225 749 aa4.77□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Yap1P46938 488 aa4.77□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Ccr5P51682 354 aa4.77□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Nrsn1P97799 196 aa4.77□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 EgfrQ01279 1210 aa4.77□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Nucb1Q02819 459 aaKnown RBP4.77□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Rnpc3Q3UZ01 514 aaKnown RBP4.77□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Usp48Q3V0C5 1052 aa4.77□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Gas2l2Q5SSG4 860 aa4.77□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Sik1Q60670 779 aa4.77□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 SympkQ80X82 1284 aa4.77□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Gm9758Q80ZT2 255 aa4.77□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Nop53Q8BK35 484 aaKnown RBP4.77□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 FktnQ8R507 461 aa4.77□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Lrrfip2Q91WK0 415 aa4.77□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Synpo2Q91YE8 1087 aaKnown RBP4.77□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Atg7Q9D906 698 aa4.77□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Atp2b2Q9R0K7 1198 aa4.77□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Tnfsf13bQ9WU72 309 aa4.77□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Cep350E9Q309 3095 aa4.76□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Jbts17Q8CE72 3214 aa4.76□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Frmpd3A0A140LIW3 1774 aa4.76□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Smad7O35253 426 aa4.76□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 C4bP01029 1738 aa4.76□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Krt18P05784 423 aa4.76□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Cd19P25918 547 aa4.76□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Ptk2P34152 1090 aa4.76□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 NogP97466 232 aa4.76□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Mrs2Q5NCE8 434 aa4.76□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Nsd3Q6P2L6 1439 aa4.76□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Cnpy4Q8BQ47 245 aa4.76□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Rint1Q8BZ36 792 aa4.76□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Tgif2Q8C0Y1 237 aa4.76□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Card11Q8CIS0 1159 aa4.76□□□□□ -1.65
Gt(ROSA)26Sor-204ENSMUST00000167415 Tmem259Q8CIV2 574 aa4.76□□□□□ -1.65
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms