RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Nsd2Q8BVE8 1365 aa10.45□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Proca1B0QZF7 307 aa10.45□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Stx8O88983 236 aa10.45□□□□□ -0.74
Col6a5-201ENSMUST00000165165 DymQ8CHY3 669 aa10.45□□□□□ -0.74
Col6a5-201ENSMUST00000165165 HnrnpcQ9Z204 313 aaKnown RBP10.45□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Q4VA45 678 aa10.44□□□□□ -0.74
Col6a5-201ENSMUST00000165165 U2af1l4Q8BGJ9 220 aa10.44□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Ppp1r42Q8R1Z4 357 aa10.44□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Lonp2Q9DBN5 852 aa10.44□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Gm6588E9Q3K0 461 aa10.44□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Ncf1Q09014 390 aa10.44□□□□□ -0.74
Col6a5-201ENSMUST00000165165 PalmdQ9JHU2 551 aa10.44□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Stat1P42225 749 aa10.44□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Leo1Q5XJE5 667 aa10.44□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Hand2Q61039 217 aa10.44□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Csrnp2Q8BGQ2 534 aa10.44□□□□□ -0.74
Col6a5-201ENSMUST00000165165 WtapQ9ER69 396 aa10.44□□□□□ -0.74
Col6a5-201ENSMUST00000165165 PalmQ9Z0P4 383 aa10.44□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Atad2bE9Q166 1460 aaKnown RBP10.44□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Lrrc74aA0A1Y7VMD6 494 aa10.44□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Fen1P39749 378 aa10.44□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Cdk19Q8BWD8 501 aa10.44□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Rapgef1Q3UHC1 1224 aa10.44□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Bcar3Q9QZK2 820 aa10.44□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Ccdc70Q9D9B0 223 aa10.44□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Pck1Q9Z2V4 622 aa10.44□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Iqcj-Schip1A0A088MLT8 559 aa10.44□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Tspyl1O88852 379 aa10.44□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Schip1P0DPB4 484 aa10.44□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Serpinb1cQ5SV42 375 aa10.44□□□□□ -0.74
Col6a5-201ENSMUST00000165165 RarsQ9D0I9 660 aaKnown RBP10.44□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Hmg20bQ9Z104 317 aa10.44□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Krt19P19001 403 aa10.43□□□□□ -0.74
Col6a5-201ENSMUST00000165165 NxnP97346 435 aa10.43□□□□□ -0.74
Col6a5-201ENSMUST00000165165 SpopQ6ZWS8 374 aa10.43□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Psmb7P70195 277 aa10.43□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Nlrp14Q6B966 993 aa10.43□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Clec16aQ80U30 1036 aa10.43□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Cabs1Q8C633 391 aa10.43□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Golga5Q9QYE6 729 aa10.43□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Atp8b3Q6UQ17 1335 aa10.43□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Pde1bQ01065 535 aa10.43□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Pnpla2Q8BJ56 486 aa10.43□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Pspc1Q8R326 523 aaKnown RBP10.43□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Spata17Q9D552 379 aa10.43□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Sf3a3Q9D554 501 aaKnown RBP10.43□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Luc7l3Q5SUF2 432 aaKnown RBP10.43□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Ccpg1Q640L3 753 aa10.43□□□□□ -0.74
Col6a5-201ENSMUST00000165165 GancQ8BVW0 898 aa10.43□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Nfkbil1O88995 381 aa10.42□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Hmgb2P30681 210 aaKnown RBP10.42□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Ppfia3P60469 1194 aa10.42□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Sox13Q04891 613 aa10.42□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Tbc1d5Q80XQ2 815 aa10.42□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Frmd4bQ920B0 1035 aa10.42□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Usp33Q8R5K2 909 aa10.42□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Uba5Q8VE47 403 aa10.42□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Dnaaf1Q9D2H9 634 aa10.42□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Rap1gds1E9Q912 607 aa10.42□□□□□ -0.74
Col6a5-201ENSMUST00000165165 KaznQ69ZS8 779 aa10.42□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Rassf10Q8BL43 508 aa10.42□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Cwc25Q9DBF7 416 aa10.42□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Sycp2lA0A0M3U1B0 842 aa10.42□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Pet2A2AHY8 747 aa10.42□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Zbtb43Q9DAI4 467 aa10.42□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Ccdc121E9Q6D3 323 aa10.42□□□□□ -0.74
Col6a5-201ENSMUST00000165165 TrdnE9Q9K5 693 aa10.42□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Mpp4Q6P7F1 635 aa10.42□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Arhgef6Q8K4I3 771 aa10.42□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Efhd1Q9D4J1 240 aa10.42□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Elp1Q7TT37 1333 aaKnown RBP10.42□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Tiam1Q60610 1591 aa10.42□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Akap17bA2A3V1 959 aa10.41□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Gm4981Q3ULJ8 291 aa10.41□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Bfsp1A2AMT1 669 aa10.41□□□□□ -0.74
Col6a5-201ENSMUST00000165165 1700018F24RikB2RW27 314 aa10.41□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Ercc5P35689 1170 aa10.41□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Vat1lQ80TB8 417 aa10.41□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Cdk5rap3Q99LM2 503 aa10.41□□□□□ -0.74
Col6a5-201ENSMUST00000165165 MarcksP26645 309 aaKnown RBP10.41□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Gm21985Q6P6P5 1106 aa10.41□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Rbbp5Q8BX09 538 aaKnown RBP10.41□□□□□ -0.74
Col6a5-201ENSMUST00000165165 NapgQ9CWZ7 312 aa10.41□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Dpf1Q9QX66 387 aa10.41□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Tbc1d9Q3UYK3 1264 aa10.41□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Ccdc154Q6RUT8 657 aa10.41□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Snd1Q78PY7 910 aaKnown RBP10.41□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Ranbp6Q8BIV3 1105 aa10.41□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Syf2Q9D198 242 aaKnown RBP10.41□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Znf280dQ68FE8 974 aa10.41□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Snx13Q6PHS6 957 aa10.41□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Art2aP17981 287 aa10.41□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Tyro3P55144 880 aa10.41□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Ift122Q6NWV3 1182 aa10.41□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Lin9Q8C735 542 aa10.41□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Bbs5Q9CZQ9 341 aa10.41□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Ak9G3UYQ4 1894 aa10.41□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Btn2a2A4QPC6 514 aa10.41□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Spats2Q8K1N4 545 aaKnown RBP10.41□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Atp6v1e2Q9D593 226 aa10.41□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms