RNA–Protein interactions for RNA: ENSMUST00000116359.2

Ctc1-202, Transcript of CST complex subunit CTC1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ctc1, Length 3,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-202ENSMUST00000116359 Mtmr3Q8K296 1196 aa11.69□□□□□ -0.54
Ctc1-202ENSMUST00000116359 TxlnbQ8VBT1 685 aa11.69□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Syf2Q9D198 242 aaKnown RBP11.69□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Arhgap23Q69ZH9 1483 aa11.68□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Prex1Q69ZK0 1650 aa11.68□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Mybbp1aQ7TPV4 1344 aaKnown RBP11.68□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Zscan20B2KFW1 1030 aa11.68□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Birc3O08863 600 aa11.68□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Ccdc39Q9D5Y1 937 aa11.68□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Ppfia1B2RXQ2 1266 aa11.68□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Atp8b1Q148W0 1251 aa11.68□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Iffo2Q8R2V2 512 aa11.68□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Aox2Q5SGK3 1345 aa11.68□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Rbm8a2A0A0N4SUH6 174 aa11.68□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Wee1P47810 646 aa11.68□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Elf1Q60775 612 aa11.68□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Polr3dQ91WD1 398 aa11.68□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Rbm8aQ9CWZ3 174 aa11.68□□□□□ -0.54
Ctc1-202ENSMUST00000116359 AdnpQ9Z103 1108 aaKnown RBP11.68□□□□□ -0.54
Ctc1-202ENSMUST00000116359 IghaA0A0A6YXW6 389 aa11.67□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Trim28Q62318 834 aa11.67□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Sv2bQ8BG39 683 aa11.67□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Amigo3Q8C2S7 508 aa11.67□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Brd3Q8K2F0 726 aaKnown RBP11.67□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Sipa1l1Q8C0T5 1782 aa11.67□□□□□ -0.54
Ctc1-202ENSMUST00000116359 PalldQ9ET54 1408 aa11.67□□□□□ -0.54
Ctc1-202ENSMUST00000116359 LtkP08923 888 aa11.67□□□□□ -0.54
Ctc1-202ENSMUST00000116359 LbrQ3U9G9 626 aaKnown RBP11.67□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Hip1rQ9JKY5 1068 aa11.67□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Ak2Q9WTP6 239 aa11.67□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Ppfia3P60469 1194 aa11.66□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Dpf2Q61103 391 aaKnown RBP11.66□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Gnl3lQ6PGG6 577 aaKnown RBP11.66□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Trim30cD3YVI9 513 aa11.66□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Trim6Q8BGE7 488 aa11.66□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Sp8Q8BMJ8 486 aa11.66□□□□□ -0.54
Ctc1-202ENSMUST00000116359 A0A0U1RNP2 1173 aa11.66□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Nf2P46662 596 aa11.66□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Rnf20Q5DTM8 973 aa11.66□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Ppp1r1bQ60829 194 aa11.66□□□□□ -0.54
Ctc1-202ENSMUST00000116359 PrimpolQ6P1E7 537 aa11.66□□□□□ -0.54
Ctc1-202ENSMUST00000116359 IqcgQ80W32 419 aa11.66□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Ccer1Q9CQL2 403 aa11.66□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Chchd3Q9CRB9 227 aaKnown RBP11.66□□□□□ -0.54
Ctc1-202ENSMUST00000116359 PzpQ61838 1495 aa11.65□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Ccdc155Q80VJ8 648 aa11.65□□□□□ -0.54
Ctc1-202ENSMUST00000116359 SnrkQ8VDU5 748 aa11.65□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Prpf6Q91YR7 941 aaKnown RBP11.65□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Uchl5Q9WUP7 329 aa11.65□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Tns3Q5SSZ5 1440 aa11.65□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Tdo2P48776 406 aa11.65□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Q3UJC8 639 aa11.65□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Phactr4Q501J7 694 aa11.65□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Ehd2Q8BH64 543 aa11.65□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Stag1Q9D3E6 1258 aa11.65□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Grin2dQ03391 1323 aa11.65□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Kif13aQ9EQW7 1749 aa11.65□□□□□ -0.54
Ctc1-202ENSMUST00000116359 NeblQ0II04 452 aa11.65□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Fam83gQ5SWY7 812 aa11.65□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Tut1Q8R3F9 869 aa11.65□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Card14Q99KF0 999 aa11.65□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Tceal9Q9DD24 104 aa11.65□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Ugt1a5B2RT14 529 aa11.64□□□□□ -0.55
Ctc1-202ENSMUST00000116359 BlmhQ8R016 455 aa11.64□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Lmbr1Q9JIT0 490 aa11.64□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Vil1Q62468 827 aa11.64□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Kirrel3Q8BR86 778 aa11.64□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Nat10Q8K224 1024 aaKnown RBP11.64□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Hps3Q91VB4 1002 aa11.64□□□□□ -0.55
Ctc1-202ENSMUST00000116359 RabggtaQ9JHK4 567 aa11.64□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Scnn1bQ9WU38 638 aa11.64□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Kank3Q9Z1P7 791 aa11.64□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Kif20bQ80WE4 1774 aaKnown RBP11.64□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Proca1B0QZF7 307 aa11.64□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Ccdc191J3QQ27 883 aa11.64□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Ggnbp2Q5SV77 696 aa11.64□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Gngt1Q61012 74 aa11.64□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Lamb3Q61087 1168 aa11.64□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Ddx11Q6AXC6 880 aa11.64□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Cdc23Q8BGZ4 597 aa11.64□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Akap12Q9WTQ5 1684 aa11.64□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Lrrc7Q80TE7 1490 aa11.63□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Psmb7P70195 277 aa11.63□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Snd1Q78PY7 910 aaKnown RBP11.63□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Ccdc93Q7TQK5 629 aa11.63□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Phf8Q80TJ7 1023 aa11.63□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Rps6kb1Q8BSK8 525 aa11.63□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Sugp2Q8CH09 1067 aa11.63□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Farp2Q91VS8 1065 aa11.63□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Tnip1Q9WUU8 647 aa11.63□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Psma5Q9Z2U1 241 aaKnown RBP11.63□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Klhl33G3UW92 533 aa11.63□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Sema6bO54951 886 aa11.63□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Stat1P42225 749 aa11.63□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Gucy2cQ3UWA6 1072 aa11.63□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Zbtb45Q52KG4 520 aa11.63□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Sdad1Q80UZ2 687 aaKnown RBP11.63□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Ppfibp1Q8C8U0 969 aaKnown RBP11.63□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Sirt1Q923E4 737 aa11.63□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Col4a3bpQ9EQG9 624 aa11.63□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms