RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Esyt1Q3U7R1 1092 aaKnown RBP15.52■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Isy1Q69ZQ2 285 aaKnown RBP15.52■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Itsn1Q9Z0R4 1714 aa15.52■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Trim30aP15533 496 aa15.52■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Gnat2P50149 354 aa15.52■□□□□ 0.07
Clcn3-204ENSMUST00000110301 March6Q6ZQ89 909 aa15.52■□□□□ 0.07
Clcn3-204ENSMUST00000110301 MypopQ8R4U1 393 aa15.52■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Trim11Q99PQ2 467 aa15.52■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Wdr33Q8K4P0 1330 aaKnown RBP15.51■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Zbtb7aO88939 569 aaKnown RBP15.51■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Large2Q5XPT3 690 aa15.51■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Acnat2Q8BGG9 420 aa15.51■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Vps16Q920Q4 839 aa15.51■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Emilin1Q99K41 1017 aa15.51■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Rps6ka4Q9Z2B9 773 aa15.51■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Ube4aE9Q735 1028 aa15.51■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Ciao1Q99KN2 339 aa15.51■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Ndufa8Q9DCJ5 172 aa15.51■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Gm13023A2A8N2 498 aa15.5■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Cyp19a1P28649 503 aa15.5■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Kmt5bQ3U8K7 883 aa15.5■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Zfp91Q62511 572 aa15.5■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Fam43aQ8BUP8 424 aa15.5■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Pcdhb5Q91XZ5 792 aa15.5■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Adarb2Q9JI20 745 aa15.5■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Gja10Q9WUS4 505 aa15.5■□□□□ 0.07
Clcn3-204ENSMUST00000110301 RictorQ6QI06 1708 aa15.5■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Eif5P59325 429 aaKnown RBP15.5■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Ubash3aQ3V3E1 624 aa15.5■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Nlrp9bQ66X22 1003 aa15.5■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Naa30Q8CES0 364 aa15.5■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Pold4Q9CWP8 107 aa15.5■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Ccne2Q9Z238 404 aa15.5■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Myom1Q62234 1667 aaKnown RBP15.5■□□□□ 0.07
Clcn3-204ENSMUST00000110301 FanccP50652 591 aa15.5■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Ift74Q8BKE9 600 aa15.5■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Bcl2l12Q9D3J3 255 aa15.5■□□□□ 0.07
Clcn3-204ENSMUST00000110301 C3P01027 1663 aa15.5■□□□□ 0.07
Clcn3-204ENSMUST00000110301 MsnP26041 577 aaKnown RBP15.49■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Plcb3P51432 1234 aaKnown RBP15.49■□□□□ 0.07
Clcn3-204ENSMUST00000110301 GalcP54818 684 aa15.49■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Csrnp1P59054 583 aa15.49■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Eme2Q56A04 373 aa15.49■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Ifit1Q64282 463 aa15.49■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Terf2ipQ91VL8 393 aa15.49■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Znf287Q9EQB9 759 aa15.49■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Gdf11Q9Z1W4 405 aa15.49■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Tuft1O08970 390 aa15.48■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Amhr2Q8K592 568 aa15.48■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Pcdhb22Q91XZ8 794 aa15.48■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Znf541Q0GGX2 1363 aa15.48■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Tbc1d8bA3KGB4 1114 aa15.48■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Zscan29E9Q5B4 869 aa15.48■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Tpm1P58771 284 aa15.48■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Znf697Q569E7 569 aa15.48■□□□□ 0.07
Clcn3-204ENSMUST00000110301 MycbpapQ5SUV2 932 aa15.48■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Map3k12Q60700 888 aa15.48■□□□□ 0.07
Clcn3-204ENSMUST00000110301 AbraQ8BUZ1 375 aa15.48■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Rtn1Q8K0T0 780 aa15.48■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Prr16A3KMN5 304 aa15.48■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Mdh1bQ5F204 500 aa15.48■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Kiaa0754Q69ZZ9 979 aa15.48■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Sptlc3Q8BG54 563 aa15.48■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Pdcl3Q8BVF2 240 aa15.48■□□□□ 0.07
Clcn3-204ENSMUST00000110301 StrbpQ91WM1 672 aaKnown RBP15.48■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Hps4Q99KG7 671 aa15.48■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Clip2Q9Z0H8 1047 aa15.48■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Nrxn3Q6P9K9 1571 aa15.47■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Cyp3a57D3YYZ0 503 aa15.47■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Celf1P28659 486 aaKnown RBP15.47■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Tbc1d5Q80XQ2 815 aa15.47■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Me3Q8BMF3 604 aa15.47■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Tnrc6bQ8BKI2 1810 aaKnown RBP15.47■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Vps37dQ810I0 261 aa15.47■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Ncaph2Q8BSP2 607 aa15.47■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Mtmr3Q8K296 1196 aa15.47■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Lmbr1Q9JIT0 490 aa15.47■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Stxbp4Q9WV89 557 aa15.47■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Npc1l1Q6T3U4 1333 aa15.47■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Ccdc112A0AUP1 442 aa15.47■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Oas2E9Q9A9 742 aa15.47■□□□□ 0.07
Clcn3-204ENSMUST00000110301 EzrP26040 586 aaKnown RBP15.47■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Ncf1Q09014 390 aa15.47■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Snx13Q6PHS6 957 aa15.47■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Pcdhb9E9Q5G2 828 aa15.46■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Vwa3bJ9JI28 736 aa15.46■□□□□ 0.07
Clcn3-204ENSMUST00000110301 SdsQ8VBT2 327 aa15.46■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Ube3bQ9ES34 1070 aa15.46■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Gtf2iQ9ESZ8 998 aaKnown RBP15.46■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Rcan3Q9JKK0 239 aa15.46■□□□□ 0.07
Clcn3-204ENSMUST00000110301 IcoslgQ9JHJ8 322 aa15.46■□□□□ 0.07
Clcn3-204ENSMUST00000110301 Sema6bO54951 886 aa15.46■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Eif6O55135 245 aa15.46■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Vps33bP59016 617 aa15.46■□□□□ 0.06
Clcn3-204ENSMUST00000110301 GabrdP22933 449 aa15.45■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Il15P48346 162 aa15.45■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Gtf3c6Q9D8P7 227 aa15.45■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Col14a1Q80X19 1797 aa15.45■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Fam184aE9PW83 1143 aa15.45■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Tpm2P58774 284 aa15.45■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 46.1 ms