RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Xpo4Q9ESJ0 1151 aa13.38□□□□□ -0.27
Vps54-202ENSMUST00000109578 Ubr2Q6WKZ8 1755 aa13.38□□□□□ -0.27
Vps54-202ENSMUST00000109578 Acap3Q6NXL5 833 aa13.38□□□□□ -0.27
Vps54-202ENSMUST00000109578 Sptlc2P97363 560 aaKnown RBP13.37□□□□□ -0.27
Vps54-202ENSMUST00000109578 Itga6Q61739 1091 aa13.37□□□□□ -0.27
Vps54-202ENSMUST00000109578 Edrf1Q6GQV7 1239 aa13.37□□□□□ -0.27
Vps54-202ENSMUST00000109578 Acnat2Q8BGG9 420 aa13.37□□□□□ -0.27
Vps54-202ENSMUST00000109578 Zkscan8Q8BSL0 588 aa13.37□□□□□ -0.27
Vps54-202ENSMUST00000109578 Cap2Q9CYT6 476 aa13.37□□□□□ -0.27
Vps54-202ENSMUST00000109578 Naa16Q9DBB4 864 aa13.37□□□□□ -0.27
Vps54-202ENSMUST00000109578 Cyp2d9P11714 504 aa13.37□□□□□ -0.27
Vps54-202ENSMUST00000109578 Zfp397Q7TNK4 527 aa13.37□□□□□ -0.27
Vps54-202ENSMUST00000109578 TsksO54887 585 aa13.37□□□□□ -0.27
Vps54-202ENSMUST00000109578 Fsd2Q8BZ52 692 aa13.37□□□□□ -0.27
Vps54-202ENSMUST00000109578 Emilin1Q99K41 1017 aa13.37□□□□□ -0.27
Vps54-202ENSMUST00000109578 Ftl2P49945 183 aa13.36□□□□□ -0.27
Vps54-202ENSMUST00000109578 L1td1Q587J6 782 aaKnown RBP13.36□□□□□ -0.27
Vps54-202ENSMUST00000109578 Gigyf1Q99MR1 1044 aaKnown RBP13.36□□□□□ -0.27
Vps54-202ENSMUST00000109578 Gpr182P43142 395 aa13.36□□□□□ -0.27
Vps54-202ENSMUST00000109578 Nol10Q5RJG1 687 aaKnown RBP13.36□□□□□ -0.27
Vps54-202ENSMUST00000109578 Zfp202Q8C879 641 aa13.36□□□□□ -0.27
Vps54-202ENSMUST00000109578 Cnot6lQ8VEG6 555 aa13.36□□□□□ -0.27
Vps54-202ENSMUST00000109578 Large1Q9Z1M7 756 aa13.36□□□□□ -0.27
Vps54-202ENSMUST00000109578 Znf568E9PYI1 671 aa13.36□□□□□ -0.27
Vps54-202ENSMUST00000109578 Kiaa1524Q8BWY9 907 aa13.36□□□□□ -0.27
Vps54-202ENSMUST00000109578 Llgl2Q3TJ91 1027 aa13.36□□□□□ -0.27
Vps54-202ENSMUST00000109578 Myl10Q62082 202 aa13.36□□□□□ -0.27
Vps54-202ENSMUST00000109578 DymQ8CHY3 669 aa13.36□□□□□ -0.27
Vps54-202ENSMUST00000109578 Gas2l3Q3UWW6 683 aa13.35□□□□□ -0.27
Vps54-202ENSMUST00000109578 Ehd4Q9EQP2 541 aa13.35□□□□□ -0.27
Vps54-202ENSMUST00000109578 Sik3Q6P4S6 1311 aa13.35□□□□□ -0.27
Vps54-202ENSMUST00000109578 Dync1i1O88485 628 aa13.35□□□□□ -0.27
Vps54-202ENSMUST00000109578 Tpcn2Q8BWC0 731 aa13.35□□□□□ -0.27
Vps54-202ENSMUST00000109578 Ciao1Q99KN2 339 aa13.35□□□□□ -0.27
Vps54-202ENSMUST00000109578 Acot9Q9R0X4 439 aaKnown RBP13.35□□□□□ -0.27
Vps54-202ENSMUST00000109578 Dnajc25A2ALW5 357 aa13.35□□□□□ -0.27
Vps54-202ENSMUST00000109578 Pfkfb1P70266 471 aa13.35□□□□□ -0.27
Vps54-202ENSMUST00000109578 Tomm22Q9CPQ3 142 aa13.35□□□□□ -0.27
Vps54-202ENSMUST00000109578 Cdc45Q9Z1X9 566 aa13.35□□□□□ -0.27
Vps54-202ENSMUST00000109578 Lipo1J3QME6 396 aa13.34□□□□□ -0.27
Vps54-202ENSMUST00000109578 Anks1aP59672 1150 aa13.34□□□□□ -0.27
Vps54-202ENSMUST00000109578 Gm12185Q5NCB2 835 aa13.34□□□□□ -0.27
Vps54-202ENSMUST00000109578 Amigo3Q8C2S7 508 aa13.34□□□□□ -0.27
Vps54-202ENSMUST00000109578 Appbp2Q9DAX9 585 aa13.34□□□□□ -0.27
Vps54-202ENSMUST00000109578 Stxbp4Q9WV89 557 aa13.34□□□□□ -0.27
Vps54-202ENSMUST00000109578 Unc13bQ9Z1N9 1602 aa13.34□□□□□ -0.27
Vps54-202ENSMUST00000109578 Cyp26a1O55127 497 aa13.34□□□□□ -0.27
Vps54-202ENSMUST00000109578 Cyp19a1P28649 503 aa13.34□□□□□ -0.27
Vps54-202ENSMUST00000109578 Samsn1P57725 372 aa13.34□□□□□ -0.27
Vps54-202ENSMUST00000109578 Clca2Q8BG22 942 aa13.34□□□□□ -0.27
Vps54-202ENSMUST00000109578 Lmod1Q8BVA4 595 aa13.34□□□□□ -0.27
Vps54-202ENSMUST00000109578 Otud6bQ8K2H2 294 aa13.34□□□□□ -0.27
Vps54-202ENSMUST00000109578 Nop2Q922K7 793 aaKnown RBP13.34□□□□□ -0.27
Vps54-202ENSMUST00000109578 Sall1Q9ER74 1322 aa13.34□□□□□ -0.27
Vps54-202ENSMUST00000109578 Surf1P09925 306 aa13.33□□□□□ -0.27
Vps54-202ENSMUST00000109578 Prkag3Q8BGM7 489 aa13.33□□□□□ -0.27
Vps54-202ENSMUST00000109578 Frat2Q8K025 231 aa13.33□□□□□ -0.27
Vps54-202ENSMUST00000109578 Ddx27Q921N6 760 aaKnown RBP13.33□□□□□ -0.27
Vps54-202ENSMUST00000109578 Elf2Q9JHC9 593 aa13.33□□□□□ -0.27
Vps54-202ENSMUST00000109578 Plekhd1B2RPU2 505 aa13.33□□□□□ -0.28
Vps54-202ENSMUST00000109578 Gm20425E9Q035 978 aaKnown RBP13.33□□□□□ -0.28
Vps54-202ENSMUST00000109578 Ccng2O08918 344 aa13.33□□□□□ -0.28
Vps54-202ENSMUST00000109578 SrprbP47758 269 aa13.33□□□□□ -0.28
Vps54-202ENSMUST00000109578 Larp6Q8BN59 492 aa13.33□□□□□ -0.28
Vps54-202ENSMUST00000109578 Ift57Q8BXG3 429 aa13.33□□□□□ -0.28
Vps54-202ENSMUST00000109578 Srek1Q8BZX4 494 aaKnown RBP13.33□□□□□ -0.28
Vps54-202ENSMUST00000109578 Telo2Q9DC40 840 aaKnown RBP13.33□□□□□ -0.28
Vps54-202ENSMUST00000109578 Gm43638A0A0J9YU36 694 aa13.33□□□□□ -0.28
Vps54-202ENSMUST00000109578 Dnm1P39053 867 aa13.33□□□□□ -0.28
Vps54-202ENSMUST00000109578 Ccnl1Q52KE7 532 aaKnown RBP13.33□□□□□ -0.28
Vps54-202ENSMUST00000109578 Taf3Q5HZG4 932 aa13.33□□□□□ -0.28
Vps54-202ENSMUST00000109578 Nwd2Q6P5U7 1742 aa13.33□□□□□ -0.28
Vps54-202ENSMUST00000109578 Smg7Q5RJH6 1138 aaKnown RBP13.33□□□□□ -0.28
Vps54-202ENSMUST00000109578 Ints4Q8CIM8 964 aa13.33□□□□□ -0.28
Vps54-202ENSMUST00000109578 Gm28047Q3US59 414 aa13.32□□□□□ -0.28
Vps54-202ENSMUST00000109578 Dnm3Q8BZ98 863 aa13.32□□□□□ -0.28
Vps54-202ENSMUST00000109578 ImmtQ8CAQ8 757 aaKnown RBP13.32□□□□□ -0.28
Vps54-202ENSMUST00000109578 Abca15E9PWH4 1668 aa13.32□□□□□ -0.28
Vps54-202ENSMUST00000109578 Carmil3Q3UFQ8 1375 aa13.32□□□□□ -0.28
Vps54-202ENSMUST00000109578 Cplx1P63040 134 aa13.32□□□□□ -0.28
Vps54-202ENSMUST00000109578 CenpqQ9CPQ5 267 aa13.32□□□□□ -0.28
Vps54-202ENSMUST00000109578 Zeb2Q9R0G7 1215 aa13.32□□□□□ -0.28
Vps54-202ENSMUST00000109578 Magi2Q9WVQ1 1275 aa13.32□□□□□ -0.28
Vps54-202ENSMUST00000109578 LtkP08923 888 aa13.32□□□□□ -0.28
Vps54-202ENSMUST00000109578 Dnaaf4Q8R368 420 aa13.32□□□□□ -0.28
Vps54-202ENSMUST00000109578 Yeats4Q9CR11 227 aaKnown RBP13.32□□□□□ -0.28
Vps54-202ENSMUST00000109578 CoblQ5NBX1 1337 aaKnown RBP13.32□□□□□ -0.28
Vps54-202ENSMUST00000109578 Pcdh10E9PXQ7 1057 aa13.31□□□□□ -0.28
Vps54-202ENSMUST00000109578 Nlrp9aQ66X03 949 aa13.31□□□□□ -0.28
Vps54-202ENSMUST00000109578 Sptlc3Q8BG54 563 aa13.31□□□□□ -0.28
Vps54-202ENSMUST00000109578 Mei4Q8BRM6 389 aa13.31□□□□□ -0.28
Vps54-202ENSMUST00000109578 Rec8Q8C5S7 591 aa13.31□□□□□ -0.28
Vps54-202ENSMUST00000109578 Grin2dQ03391 1323 aa13.31□□□□□ -0.28
Vps54-202ENSMUST00000109578 Nrxn3Q6P9K9 1571 aa13.31□□□□□ -0.28
Vps54-202ENSMUST00000109578 Pcdhb9E9Q5G2 828 aa13.31□□□□□ -0.28
Vps54-202ENSMUST00000109578 Metap2O08663 478 aaKnown RBP13.31□□□□□ -0.28
Vps54-202ENSMUST00000109578 Me1P06801 572 aa13.31□□□□□ -0.28
Vps54-202ENSMUST00000109578 Epha2Q03145 977 aa13.31□□□□□ -0.28
Vps54-202ENSMUST00000109578 MbipQ99LQ1 341 aa13.31□□□□□ -0.28
Vps54-202ENSMUST00000109578 Vnn1Q9Z0K8 512 aa13.31□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 238.6 ms