RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Shisa4Q8CA71 197 aa10.65□□□□□ -0.7
Scn8a-202ENSMUST00000096198 Fam83aQ8K2P2 436 aa10.65□□□□□ -0.7
Scn8a-202ENSMUST00000096198 Lmcd1Q8VEE1 365 aa10.65□□□□□ -0.7
Scn8a-202ENSMUST00000096198 Leng1Q9DB98 261 aa10.65□□□□□ -0.7
Scn8a-202ENSMUST00000096198 Sytl4Q9R0Q1 673 aa10.65□□□□□ -0.7
Scn8a-202ENSMUST00000096198 Col12a1Q60847 3120 aa10.65□□□□□ -0.7
Scn8a-202ENSMUST00000096198 Carmil3Q3UFQ8 1375 aa10.65□□□□□ -0.71
Scn8a-202ENSMUST00000096198 UncxO08934 530 aa10.64□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Celf1P28659 486 aaKnown RBP10.64□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Ccnd3P30282 292 aa10.64□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Esyt3Q5DTI8 891 aa10.64□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Ssh1Q76I79 1042 aa10.64□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Xrn2Q9DBR1 951 aaKnown RBP10.64□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Pnmal2G3X9N3 661 aa10.63□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Adam15O88839 864 aa10.63□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Abcb7Q61102 752 aaKnown RBP10.63□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Smc1bQ920F6 1248 aa10.63□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Tgm5Q9D7I9 724 aa10.63□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Cabp2Q9JLK4 216 aa10.63□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Myh1Q5SX40 1942 aa10.62□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Map3k15A2AQW0 1331 aa10.62□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Irf5P56477 497 aa10.62□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Olfm4Q3UZZ4 505 aa10.62□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Psen2Q61144 448 aa10.62□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Ankib1Q6ZPS6 1085 aa10.62□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Ero1aQ8R180 464 aa10.62□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Dydc2Q9D3X8 139 aa10.62□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Znf541Q0GGX2 1363 aa10.62□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Abcc12Q80WJ6 1366 aa10.62□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Dnah12Q3V0Q1 3086 aa10.61□□□□□ -0.71
Scn8a-202ENSMUST00000096198 SynrgQ5SV85 1306 aa10.61□□□□□ -0.71
Scn8a-202ENSMUST00000096198 SpegQ62407 3262 aa10.61□□□□□ -0.71
Scn8a-202ENSMUST00000096198 OgdhlE9Q7L0 1029 aa10.61□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Slc6a20bO88575 635 aa10.61□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Evx2P49749 475 aa10.61□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Samd11Q1RNF8 542 aa10.61□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Defb25Q30KN8 71 aa10.61□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Ell2Q3UKU1 639 aa10.61□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Tmprss11eQ5S248 423 aa10.61□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Ccdc85bQ6PDY0 202 aa10.61□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Lca5lQ8C0X0 741 aa10.61□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Scnn1bQ9WU38 638 aa10.61□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Ttc21aQ8C0S4 1314 aa10.6□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Ncor2Q9WU42 2472 aaKnown RBP10.6□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Phox2bO35690 314 aa10.6□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Hsp90ab1P11499 724 aaKnown RBP10.6□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Prim1P20664 417 aa10.6□□□□□ -0.71
Scn8a-202ENSMUST00000096198 CanxP35564 591 aaKnown RBP10.6□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Bmp1P98063 991 aa10.6□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Bms1Q6PGF5 1284 aaKnown RBP10.6□□□□□ -0.71
Scn8a-202ENSMUST00000096198 3830417A13RikQ8BQJ2 303 aa10.6□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Smad3Q8BUN5 425 aa10.6□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Trim52Q8CDV4 233 aa10.6□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Syne4Q8CII8 388 aa10.6□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Cndp2Q9D1A2 475 aaKnown RBP10.6□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Npc1l1Q6T3U4 1333 aa10.59□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Rps8P62242 208 aaKnown RBP10.59□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Col6a1Q04857 1025 aa10.59□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Srebf2Q3U1N2 1130 aa10.59□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Prdm6Q3UZD5 596 aa10.59□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Znf280dQ68FE8 974 aa10.59□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Ddx31Q6NZQ2 687 aaKnown RBP10.59□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Cstf2tQ8C7E9 632 aaKnown RBP10.59□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Tut1Q8R3F9 869 aa10.59□□□□□ -0.71
Scn8a-202ENSMUST00000096198 P2rx7Q9Z1M0 595 aa10.59□□□□□ -0.71
Scn8a-202ENSMUST00000096198 Usp17lbE9Q9U0 468 aa10.58□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Prr11Q8BHE0 368 aa10.58□□□□□ -0.72
Scn8a-202ENSMUST00000096198 NrdcQ8BHG1 1161 aa10.58□□□□□ -0.72
Scn8a-202ENSMUST00000096198 GptQ8QZR5 496 aa10.58□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Stk31Q99MW1 1018 aa10.58□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Znf609Q8BZ47 1413 aa10.58□□□□□ -0.72
Scn8a-202ENSMUST00000096198 NefmP08553 848 aa10.57□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Myd88P22366 296 aa10.57□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Ddx55Q6ZPL9 600 aaKnown RBP10.57□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Onecut3Q8K557 490 aa10.57□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Usp33Q8R5K2 909 aa10.57□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Sf3b3Q921M3 1217 aaKnown RBP10.57□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Naa16Q9DBB4 864 aa10.57□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Rbm6S4R1W5 1118 aaKnown RBP10.57□□□□□ -0.72
Scn8a-202ENSMUST00000096198 CpdO89001 1377 aa10.56□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Chd8Q09XV5 2582 aaKnown RBP10.56□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Fkbp1aP26883 108 aaKnown RBP10.56□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Aak1Q3UHJ0 959 aa10.56□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Klrg2Q3UM83 387 aa10.56□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Mapk4Q6P5G0 583 aa10.56□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Hdac9Q99N13 588 aa10.56□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Rtn4Q99P72 1162 aaKnown RBP10.56□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Bub1bQ9Z1S0 1052 aa10.56□□□□□ -0.72
Scn8a-202ENSMUST00000096198 L1camP11627 1260 aa10.55□□□□□ -0.72
Scn8a-202ENSMUST00000096198 StamP70297 548 aa10.55□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Cers3Q1A3B0 383 aa10.55□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Ggnbp2Q5SV77 696 aa10.55□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Cyp7a1Q64505 503 aa10.55□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Ints3Q7TPD0 1041 aaKnown RBP10.55□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Znf18Q810A1 556 aa10.55□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Cyp2d12Q8BVD2 504 aa10.55□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Vmn1r199Q8R280 367 aa10.55□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Kif2cQ922S8 721 aa10.55□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Elp3Q9CZX0 547 aa10.55□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Inpp5dQ9ES52 1191 aa10.55□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms