RNA–Protein interactions for RNA: ENSMUST00000077689.13

Ssh1-201, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 3,164 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-201ENSMUST00000077689 Rb1P13405 921 aa13.15□□□□□ -0.3
Ssh1-201ENSMUST00000077689 Anapc15P60007 132 aa13.15□□□□□ -0.3
Ssh1-201ENSMUST00000077689 Gjb2Q00977 226 aa13.15□□□□□ -0.3
Ssh1-201ENSMUST00000077689 Map3k11Q80XI6 850 aa13.15□□□□□ -0.3
Ssh1-201ENSMUST00000077689 Atg4aQ8C9S8 396 aa13.15□□□□□ -0.3
Ssh1-201ENSMUST00000077689 Gimap6Q8K349 305 aa13.15□□□□□ -0.3
Ssh1-201ENSMUST00000077689 RestQ8VIG1 1082 aa13.15□□□□□ -0.3
Ssh1-201ENSMUST00000077689 Nphp1Q9QY53 687 aa13.15□□□□□ -0.3
Ssh1-201ENSMUST00000077689 Magi2Q9WVQ1 1275 aa13.15□□□□□ -0.3
Ssh1-201ENSMUST00000077689 Pik3c2aQ61194 1686 aa13.15□□□□□ -0.3
Ssh1-201ENSMUST00000077689 Hdgfl1Q2VPR5 283 aa13.15□□□□□ -0.3
Ssh1-201ENSMUST00000077689 Q8C1R3 189 aa13.15□□□□□ -0.3
Ssh1-201ENSMUST00000077689 Zswim4Q8C7B8 1101 aa13.15□□□□□ -0.3
Ssh1-201ENSMUST00000077689 SyncQ9EPM5 470 aa13.15□□□□□ -0.3
Ssh1-201ENSMUST00000077689 Col16a1Q8BLX7 1580 aa13.15□□□□□ -0.3
Ssh1-201ENSMUST00000077689 Cacna2d1O08532 1103 aa13.14□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Cct2P80314 535 aaKnown RBP13.14□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Phactr4Q501J7 694 aa13.14□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Hook1Q8BIL5 728 aa13.14□□□□□ -0.31
Ssh1-201ENSMUST00000077689 PreplQ8C167 725 aa13.14□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Dnajc10Q9DC23 793 aa13.14□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Camta1A2A891 1682 aa13.14□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Rsrc2A2RTL5 376 aaKnown RBP13.14□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Prkag3Q8BGM7 489 aa13.14□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Luzp1Q8R4U7 1068 aaKnown RBP13.14□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Rufy3Q9D394 469 aa13.14□□□□□ -0.31
Ssh1-201ENSMUST00000077689 PdclQ9DBX2 301 aa13.14□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Kif20bQ80WE4 1774 aaKnown RBP13.14□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Rnf40Q3U319 1001 aa13.14□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Tab3Q571K4 716 aa13.14□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Ints4Q8CIM8 964 aa13.14□□□□□ -0.31
Ssh1-201ENSMUST00000077689 MyripQ8K3I4 856 aa13.14□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Xpo4Q9ESJ0 1151 aa13.14□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Stx1aO35526 288 aa13.13□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Syt1P46096 421 aa13.13□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Sem1P60897 70 aa13.13□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Esyt3Q5DTI8 891 aa13.13□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Cep131Q62036 1060 aa13.13□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Rad17Q6NXW6 688 aa13.13□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Vps53Q8CCB4 832 aa13.13□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Tbc1d7Q9D0K0 293 aa13.13□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Tubb4aQ9D6F9 444 aa13.13□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Igsf1Q7TQA1 1317 aa13.13□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Fkbp4P30416 458 aa13.13□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Bcl2l13P59017 434 aa13.13□□□□□ -0.31
Ssh1-201ENSMUST00000077689 MmeQ61391 750 aa13.13□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Cyp2d12Q8BVD2 504 aa13.13□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Ubxn4Q8VCH8 506 aa13.13□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Riok3Q9DBU3 519 aaKnown RBP13.13□□□□□ -0.31
Ssh1-201ENSMUST00000077689 PigoQ9JJI6 1093 aa13.13□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Tnip1Q9WUU8 647 aa13.13□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Akap2O54931 893 aa13.12□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Lnx1O70263 728 aa13.12□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Pfkfb2P70265 519 aa13.12□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Abcf1Q6P542 837 aaKnown RBP13.12□□□□□ -0.31
Ssh1-201ENSMUST00000077689 EmbP21995 330 aa13.12□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Bag1Q60739 355 aa13.12□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Ppp1r1bQ60829 194 aa13.12□□□□□ -0.31
Ssh1-201ENSMUST00000077689 B4galnt4Q766D5 1034 aa13.12□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Pcdhb15Q91Y04 786 aa13.12□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Dhx40Q6PE54 779 aaKnown RBP13.12□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Hpcal4Q8BGZ1 191 aa13.12□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Kcnh5Q920E3 988 aa13.12□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Rmi1Q9D4G9 616 aa13.12□□□□□ -0.31
Ssh1-201ENSMUST00000077689 A0A0U1RNP2 1173 aa13.11□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Grik3B1AS29 919 aa13.11□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Zkscan2G3X952 960 aa13.11□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Atf5O70191 283 aa13.11□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Rps6ka6Q7TPS0 764 aa13.11□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Rassf6Q80UQ2 353 aa13.11□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Rnf187Q8BFX1 236 aa13.11□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Phf23Q8BSN5 401 aa13.11□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Vps37cQ8R105 352 aa13.11□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Trim42Q9D2H5 723 aa13.11□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Krt85Q9Z2T6 507 aa13.11□□□□□ -0.31
Ssh1-201ENSMUST00000077689 D430041D05RikF6ZGR6 1678 aa13.11□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Zfp275G3X904 499 aa13.11□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Cep120Q7TSG1 988 aa13.11□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Map2P20357 1828 aa13.11□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Ubr1O70481 1757 aa13.1□□□□□ -0.31
Ssh1-201ENSMUST00000077689 NalcnQ8BXR5 1738 aa13.1□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Disp3A3KFU9 1347 aa13.1□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Slc4a10Q5DTL9 1118 aa13.1□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Tsr2Q8C8T8 191 aa13.1□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Mical1Q8VDP3 1048 aa13.1□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Cpsf2O35218 782 aaKnown RBP13.1□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Myo1bP46735 1107 aa13.1□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Pde1cQ64338 706 aa13.1□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Btbd11Q6GQW0 1109 aa13.1□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Ccdc12Q8R344 166 aaKnown RBP13.1□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Rgs12Q8CGE9 1381 aa13.1□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Gm10471E9Q1C7 252 aa13.1□□□□□ -0.31
Ssh1-201ENSMUST00000077689 1700113H08RikE9Q9Q5 327 aa13.1□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Rnf20Q5DTM8 973 aa13.1□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Slc30a9Q5IRJ6 567 aa13.1□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Lrrc1Q80VQ1 524 aa13.1□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Trim6Q8BGE7 488 aa13.1□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Rbbp5Q8BX09 538 aaKnown RBP13.1□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Q8BZJ8 459 aa13.1□□□□□ -0.31
Ssh1-201ENSMUST00000077689 Ssh3Q8K330 649 aa13.1□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 42.5 ms