RNA–Protein interactions for RNA: ENSMUST00000035237.11

Usp4-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp4, Length 3,662 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-201ENSMUST00000035237 Phf20l1Q8CCJ9 1013 aa17.35■□□□□ 0.37
Usp4-201ENSMUST00000035237 SnrkQ8VDU5 748 aa17.35■□□□□ 0.37
Usp4-201ENSMUST00000035237 Gm28047Q3US59 414 aa17.35■□□□□ 0.37
Usp4-201ENSMUST00000035237 Ccdc93Q7TQK5 629 aa17.35■□□□□ 0.37
Usp4-201ENSMUST00000035237 Trim56Q80VI1 734 aaKnown RBP17.35■□□□□ 0.37
Usp4-201ENSMUST00000035237 Mb21d2Q8C525 428 aa17.35■□□□□ 0.37
Usp4-201ENSMUST00000035237 Cnot6lQ8VEG6 555 aa17.35■□□□□ 0.37
Usp4-201ENSMUST00000035237 Iqca1Q9CUL5 857 aa17.35■□□□□ 0.37
Usp4-201ENSMUST00000035237 Myl10Q62082 202 aa17.35■□□□□ 0.37
Usp4-201ENSMUST00000035237 Secisbp2lQ6A098 1086 aaKnown RBP17.35■□□□□ 0.37
Usp4-201ENSMUST00000035237 Ift122Q6NWV3 1182 aa17.35■□□□□ 0.37
Usp4-201ENSMUST00000035237 Ccdc150Q8CDI7 1110 aa17.35■□□□□ 0.37
Usp4-201ENSMUST00000035237 Trim11Q99PQ2 467 aa17.35■□□□□ 0.37
Usp4-201ENSMUST00000035237 Exoc3l2D3YUP5 789 aa17.34■□□□□ 0.37
Usp4-201ENSMUST00000035237 Evi5P97366 809 aa17.34■□□□□ 0.37
Usp4-201ENSMUST00000035237 Ovgp1Q62010 721 aa17.34■□□□□ 0.37
Usp4-201ENSMUST00000035237 Ccdc73Q8CDM4 1066 aa17.34■□□□□ 0.37
Usp4-201ENSMUST00000035237 Rbm28Q8CGC6 750 aaKnown RBP17.34■□□□□ 0.37
Usp4-201ENSMUST00000035237 Qser1A2BIE1 1698 aa17.34■□□□□ 0.37
Usp4-201ENSMUST00000035237 Tcof1O08784 1320 aaKnown RBP17.34■□□□□ 0.37
Usp4-201ENSMUST00000035237 Gtpbp6Q3U6U5 514 aa17.34■□□□□ 0.37
Usp4-201ENSMUST00000035237 Cdc37Q61081 379 aa17.34■□□□□ 0.37
Usp4-201ENSMUST00000035237 Dusp9Q7TNL7 452 aa17.34■□□□□ 0.37
Usp4-201ENSMUST00000035237 Ncaph2Q8BSP2 607 aa17.34■□□□□ 0.37
Usp4-201ENSMUST00000035237 Zc3h6Q8BYK8 1177 aa17.34■□□□□ 0.37
Usp4-201ENSMUST00000035237 OptnQ8K3K8 584 aa17.34■□□□□ 0.37
Usp4-201ENSMUST00000035237 Ercc6l2Q9JIM3 1537 aa17.34■□□□□ 0.37
Usp4-201ENSMUST00000035237 Large1Q9Z1M7 756 aa17.34■□□□□ 0.37
Usp4-201ENSMUST00000035237 Pramel3A2AHA7 463 aa17.34■□□□□ 0.37
Usp4-201ENSMUST00000035237 Gm7903A2AWL1 463 aa17.34■□□□□ 0.37
Usp4-201ENSMUST00000035237 AV320801A2AWL3 467 aa17.34■□□□□ 0.37
Usp4-201ENSMUST00000035237 Gm5624F6ZZG8 207 aa17.34■□□□□ 0.37
Usp4-201ENSMUST00000035237 Gm15023L7MUB4 467 aa17.34■□□□□ 0.37
Usp4-201ENSMUST00000035237 Map3k11Q80XI6 850 aa17.34■□□□□ 0.37
Usp4-201ENSMUST00000035237 LarsQ8BMJ2 1178 aa17.34■□□□□ 0.37
Usp4-201ENSMUST00000035237 Rassf4Q8CB96 322 aa17.34■□□□□ 0.37
Usp4-201ENSMUST00000035237 Kri1Q8VDQ9 704 aaKnown RBP17.34■□□□□ 0.37
Usp4-201ENSMUST00000035237 Kcnh5Q920E3 988 aa17.34■□□□□ 0.37
Usp4-201ENSMUST00000035237 Tubb4aQ9D6F9 444 aa17.34■□□□□ 0.37
Usp4-201ENSMUST00000035237 Cdk12Q14AX6 1484 aaKnown RBP17.33■□□□□ 0.37
Usp4-201ENSMUST00000035237 Chd4Q6PDQ2 1915 aaKnown RBP17.33■□□□□ 0.37
Usp4-201ENSMUST00000035237 Gm43638A0A0J9YU36 694 aa17.33■□□□□ 0.37
Usp4-201ENSMUST00000035237 Abl1P00520 1123 aa17.33■□□□□ 0.37
Usp4-201ENSMUST00000035237 Smarcc2Q6PDG5 1213 aa17.33■□□□□ 0.37
Usp4-201ENSMUST00000035237 Ctdp1Q7TSG2 960 aa17.33■□□□□ 0.37
Usp4-201ENSMUST00000035237 Spata32Q8C5V0 334 aa17.33■□□□□ 0.37
Usp4-201ENSMUST00000035237 Nek9Q8K1R7 984 aa17.33■□□□□ 0.37
Usp4-201ENSMUST00000035237 Yeats4Q9CR11 227 aaKnown RBP17.33■□□□□ 0.37
Usp4-201ENSMUST00000035237 Sycp2lA0A0M3U1B0 842 aa17.33■□□□□ 0.36
Usp4-201ENSMUST00000035237 Cdkl5Q3UTQ8 938 aa17.33■□□□□ 0.36
Usp4-201ENSMUST00000035237 Itga6Q61739 1091 aa17.33■□□□□ 0.36
Usp4-201ENSMUST00000035237 Krt39Q6IFX4 482 aa17.33■□□□□ 0.36
Usp4-201ENSMUST00000035237 TkfcQ8VC30 578 aa17.33■□□□□ 0.36
Usp4-201ENSMUST00000035237 Ccdc39Q9D5Y1 937 aa17.33■□□□□ 0.36
Usp4-201ENSMUST00000035237 CemipQ8BI06 1361 aa17.33■□□□□ 0.36
Usp4-201ENSMUST00000035237 Sult6b1P0CC03 303 aa17.33■□□□□ 0.36
Usp4-201ENSMUST00000035237 Luc7l2Q7TNC4 392 aaKnown RBP17.33■□□□□ 0.36
Usp4-201ENSMUST00000035237 Usp44Q8C2S0 711 aa17.33■□□□□ 0.36
Usp4-201ENSMUST00000035237 Gm21663A0A0G2JE01 267 aa17.32■□□□□ 0.36
Usp4-201ENSMUST00000035237 Gm7361D3Z6R1 267 aa17.32■□□□□ 0.36
Usp4-201ENSMUST00000035237 5031410I06RikE9Q4E0 267 aa17.32■□□□□ 0.36
Usp4-201ENSMUST00000035237 Gm1979E9QAN3 267 aa17.32■□□□□ 0.36
Usp4-201ENSMUST00000035237 Gm5862K7N5V5 267 aa17.32■□□□□ 0.36
Usp4-201ENSMUST00000035237 Gm10220K7N660 267 aa17.32■□□□□ 0.36
Usp4-201ENSMUST00000035237 Kif3cO35066 796 aa17.32■□□□□ 0.36
Usp4-201ENSMUST00000035237 Sirt1Q923E4 737 aa17.32■□□□□ 0.36
Usp4-201ENSMUST00000035237 EcsitQ9QZH6 435 aa17.32■□□□□ 0.36
Usp4-201ENSMUST00000035237 Kcnh3Q9WVJ0 1095 aa17.32■□□□□ 0.36
Usp4-201ENSMUST00000035237 Ift172Q6VH22 1749 aa17.32■□□□□ 0.36
Usp4-201ENSMUST00000035237 Tubgcp2Q921G8 905 aa17.32■□□□□ 0.36
Usp4-201ENSMUST00000035237 Tab2Q99K90 693 aa17.32■□□□□ 0.36
Usp4-201ENSMUST00000035237 PdclQ9DBX2 301 aa17.32■□□□□ 0.36
Usp4-201ENSMUST00000035237 Rgs12Q8CGE9 1381 aa17.31■□□□□ 0.36
Usp4-201ENSMUST00000035237 MlecQ6ZQI3 291 aaKnown RBP17.31■□□□□ 0.36
Usp4-201ENSMUST00000035237 PigbQ9JJQ0 542 aa17.31■□□□□ 0.36
Usp4-201ENSMUST00000035237 Rgs9O54828 675 aa17.31■□□□□ 0.36
Usp4-201ENSMUST00000035237 Tmem109Q3UBX0 243 aa17.31■□□□□ 0.36
Usp4-201ENSMUST00000035237 Pex1Q5BL07 1284 aa17.31■□□□□ 0.36
Usp4-201ENSMUST00000035237 Hip1rQ9JKY5 1068 aa17.31■□□□□ 0.36
Usp4-201ENSMUST00000035237 H2afxP27661 143 aaKnown RBP17.31■□□□□ 0.36
Usp4-201ENSMUST00000035237 Washc4Q3UMB9 1173 aa17.31■□□□□ 0.36
Usp4-201ENSMUST00000035237 Morc2aQ69ZX6 1030 aa17.31■□□□□ 0.36
Usp4-201ENSMUST00000035237 Tpcn2Q8BWC0 731 aa17.31■□□□□ 0.36
Usp4-201ENSMUST00000035237 Epc1Q8C9X6 813 aa17.31■□□□□ 0.36
Usp4-201ENSMUST00000035237 Smc2Q8CG48 1191 aaKnown RBP17.31■□□□□ 0.36
Usp4-201ENSMUST00000035237 Phldb2Q8K1N2 1249 aa17.31■□□□□ 0.36
Usp4-201ENSMUST00000035237 Dip2aQ8BWT5 1523 aa17.31■□□□□ 0.36
Usp4-201ENSMUST00000035237 Gm21698A0A087WQP8 267 aa17.3■□□□□ 0.36
Usp4-201ENSMUST00000035237 Prl3d3A0A0M6L0J6 224 aa17.3■□□□□ 0.36
Usp4-201ENSMUST00000035237 AW822073A0A0N4SUK1 652 aa17.3■□□□□ 0.36
Usp4-201ENSMUST00000035237 Ces1hD3Z298 562 aa17.3■□□□□ 0.36
Usp4-201ENSMUST00000035237 Arid4aF8VPQ2 1261 aaKnown RBP17.3■□□□□ 0.36
Usp4-201ENSMUST00000035237 Gm21671G3UY31 267 aa17.3■□□□□ 0.36
Usp4-201ENSMUST00000035237 Myd88P22366 296 aa17.3■□□□□ 0.36
Usp4-201ENSMUST00000035237 Ppfibp1Q8C8U0 969 aaKnown RBP17.3■□□□□ 0.36
Usp4-201ENSMUST00000035237 Atad2Q8CDM1 1040 aa17.3■□□□□ 0.36
Usp4-201ENSMUST00000035237 Kcnq3Q8K3F6 873 aa17.3■□□□□ 0.36
Usp4-201ENSMUST00000035237 Ccdc83Q9D4V3 305 aa17.3■□□□□ 0.36
Usp4-201ENSMUST00000035237 Speer4bQ9D9F7 267 aa17.3■□□□□ 0.36
Usp4-201ENSMUST00000035237 Pde3aQ9Z0X4 1141 aa17.3■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 39.4 ms