RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Sptlc2P97363 560 aaKnown RBP11.34□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Iqsec3Q3TES0 1195 aa11.34□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Ddx46Q569Z5 1032 aaKnown RBP11.34□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Cep89Q9CZX2 791 aa11.34□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Hip1rQ9JKY5 1068 aa11.34□□□□□ -0.59
Ldlr-201ENSMUST00000034713 DonsonQ9QXP4 560 aa11.34□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Eya2O08575 532 aa11.34□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Mcm6P97311 821 aa11.34□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Ift88Q61371 824 aa11.34□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Zbtb40Q6PCS8 1258 aa11.34□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Klhl30Q8C3F7 581 aa11.34□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Bmp2kQ91Z96 1138 aa11.34□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Mrpl12Q9DB15 201 aaKnown RBP11.34□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Ak2Q9WTP6 239 aa11.34□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Vps33bP59016 617 aa11.34□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Itga6Q61739 1091 aa11.34□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Rai14Q9EP71 979 aaKnown RBP11.34□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Zkscan5Q9Z1D8 819 aa11.34□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Ppfibp2O35711 882 aa11.33□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Zhx1P70121 873 aa11.33□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Ppp1r37Q8BKR5 712 aa11.33□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Prdm11A2AGX3 565 aa11.33□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Tbc1d8bA3KGB4 1114 aa11.33□□□□□ -0.6
Ldlr-201ENSMUST00000034713 HmcesQ8R1M0 353 aaKnown RBP11.33□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Tbc1d7Q9D0K0 293 aa11.33□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Iqsec2Q5DU25 1478 aa11.33□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Fam107bQ3TGF2 131 aa11.32□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Ppfibp1Q8C8U0 969 aaKnown RBP11.32□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Tceanc2Q8R2M0 207 aa11.32□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Mylk2Q8VCR8 613 aa11.32□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Atp7bQ64446 1462 aa11.32□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Ces1hD3Z298 562 aa11.32□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Oas2E9Q9A9 742 aa11.32□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Cnga2Q62398 664 aa11.32□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Ttc27Q8CD92 847 aa11.32□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Zfp853A0A1D5RM95 733 aa11.32□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Sult6b1P0CC03 303 aa11.32□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Ccdc42Q5SV66 316 aa11.32□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Gigyf1Q99MR1 1044 aaKnown RBP11.32□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Naa16Q9DBB4 864 aa11.32□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Cnnm2Q3TWN3 875 aa11.31□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Ccdc114Q3UX62 658 aa11.31□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Ces1aE9PYP1 563 aa11.31□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Rrp1P56183 494 aaKnown RBP11.31□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Tbc1d2bQ3U0J8 965 aa11.31□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Znf131Q8K3J5 619 aa11.31□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Calml4Q91WQ9 153 aa11.31□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Myo1bP46735 1107 aa11.31□□□□□ -0.6
Ldlr-201ENSMUST00000034713 IntuQ059U7 942 aa11.31□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Abcc10Q8R4P9 1501 aa11.31□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Qser1A2BIE1 1698 aa11.31□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Setdb1O88974 1307 aa11.31□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Stox1B2RQL2 990 aa11.31□□□□□ -0.6
Ldlr-201ENSMUST00000034713 CltaO08585 235 aa11.31□□□□□ -0.6
Ldlr-201ENSMUST00000034713 F2rP30558 430 aa11.31□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Bsdc1Q80Y55 427 aa11.31□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Tmx4Q8C0L0 335 aa11.31□□□□□ -0.6
Ldlr-201ENSMUST00000034713 PigbQ9JJQ0 542 aa11.31□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Slit3Q9WVB4 1523 aa11.31□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Ano6Q6P9J9 911 aa11.3□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Bend3Q6PAL0 825 aa11.3□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Nup133Q8R0G9 1155 aa11.3□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Plcd1Q8R3B1 756 aa11.3□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Osbpl5Q9ER64 874 aa11.3□□□□□ -0.6
Ldlr-201ENSMUST00000034713 IghaA0A0A6YXW6 389 aa11.3□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Zscan25B2RX31 543 aa11.3□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Epb41l2O70318 988 aaKnown RBP11.3□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Bach2P97303 839 aa11.3□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Luc7l2Q7TNC4 392 aaKnown RBP11.3□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Zkscan8Q8BSL0 588 aa11.3□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Ddx27Q921N6 760 aaKnown RBP11.3□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Pet2A2AHY8 747 aa11.3□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Rbm17Q8JZX4 405 aaKnown RBP11.3□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Arhgef6Q8K4I3 771 aa11.3□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Rnf34Q99KR6 376 aa11.3□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Cap2Q9CYT6 476 aa11.3□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Ubn2Q80WC1 1314 aa11.3□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Uhrf1bp1B2KF50 1429 aa11.29□□□□□ -0.6
Ldlr-201ENSMUST00000034713 NpcdF8VQB8 469 aa11.29□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Terf1P70371 421 aa11.29□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Zfp51Q3U4L8 781 aa11.29□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Pank2Q3U4S0 443 aa11.29□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Ano2Q8CFW1 1002 aa11.29□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Dbndd1Q9CZ00 160 aa11.29□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Dnm1P39053 867 aa11.29□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Atp8a2P98200 1148 aa11.29□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Zbtb38Q3LR78 1197 aa11.29□□□□□ -0.6
Ldlr-201ENSMUST00000034713 MarsQ68FL6 902 aaKnown RBP11.29□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Trak2Q6P9N8 913 aa11.29□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Ufl1Q8CCJ3 793 aaKnown RBP11.29□□□□□ -0.6
Ldlr-201ENSMUST00000034713 MthfsQ9D110 203 aa11.29□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Cetn2Q9R1K9 172 aa11.29□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Atg4a-psA0A0G2JFS9 396 aa11.29□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Nom1Q3UFM5 854 aaKnown RBP11.29□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Ehbp1Q69ZW3 1231 aa11.29□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Atp2b4Q6Q477 1205 aa11.29□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Rps6kb1Q8BSK8 525 aa11.29□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Als2cr12Q8BVM7 383 aa11.29□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Ccdc122Q8BVN0 290 aa11.29□□□□□ -0.6
Ldlr-201ENSMUST00000034713 Atg4aQ8C9S8 396 aa11.29□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 16 ms