RNA–Protein interactions for RNA: ENSMUST00000032962.10

Cln3-201, Transcript of Battenin, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Cln3, Length 2,386 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3-201ENSMUST00000032962 Slfn1Q9Z0I7 337 aa13.95□□□□□ -0.18
Cln3-201ENSMUST00000032962 Phactr2B1AVP0 632 aa13.94□□□□□ -0.18
Cln3-201ENSMUST00000032962 Atp6v1dP57746 247 aa13.94□□□□□ -0.18
Cln3-201ENSMUST00000032962 Nom1Q3UFM5 854 aaKnown RBP13.94□□□□□ -0.18
Cln3-201ENSMUST00000032962 Nlrp9aQ66X03 949 aa13.94□□□□□ -0.18
Cln3-201ENSMUST00000032962 Unc5clQ6R653 518 aa13.94□□□□□ -0.18
Cln3-201ENSMUST00000032962 St18Q80TY4 1045 aa13.94□□□□□ -0.18
Cln3-201ENSMUST00000032962 TnksQ6PFX9 1320 aa13.94□□□□□ -0.18
Cln3-201ENSMUST00000032962 MccE9PWI3 1003 aa13.94□□□□□ -0.18
Cln3-201ENSMUST00000032962 Speer4dL7N216 212 aa13.94□□□□□ -0.18
Cln3-201ENSMUST00000032962 Letm1Q9Z2I0 738 aa13.94□□□□□ -0.18
Cln3-201ENSMUST00000032962 SrcapA0A087WQ44 3271 aa13.94□□□□□ -0.18
Cln3-201ENSMUST00000032962 Nphp3Q7TNH6 1325 aa13.93□□□□□ -0.18
Cln3-201ENSMUST00000032962 Gm4340L7N2C4 268 aa13.93□□□□□ -0.18
Cln3-201ENSMUST00000032962 Zbtb7aO88939 569 aaKnown RBP13.93□□□□□ -0.18
Cln3-201ENSMUST00000032962 Anapc15P60007 132 aa13.93□□□□□ -0.18
Cln3-201ENSMUST00000032962 Terf1P70371 421 aa13.93□□□□□ -0.18
Cln3-201ENSMUST00000032962 Rbbp8nlA2ABX0 614 aa13.93□□□□□ -0.18
Cln3-201ENSMUST00000032962 Ankrd63A2ARS0 390 aa13.93□□□□□ -0.18
Cln3-201ENSMUST00000032962 Tgfb2P27090 414 aa13.92□□□□□ -0.18
Cln3-201ENSMUST00000032962 EvcP57680 1005 aa13.92□□□□□ -0.18
Cln3-201ENSMUST00000032962 Cpa2Q504N0 417 aa13.92□□□□□ -0.18
Cln3-201ENSMUST00000032962 Insm1Q63ZV0 521 aa13.92□□□□□ -0.18
Cln3-201ENSMUST00000032962 Anp32cQ64G17 123 aa13.91□□□□□ -0.18
Cln3-201ENSMUST00000032962 Rbm15bQ6PHZ5 887 aaKnown RBP13.91□□□□□ -0.18
Cln3-201ENSMUST00000032962 Chd1lQ9CXF7 900 aa13.91□□□□□ -0.18
Cln3-201ENSMUST00000032962 Cyp2ab1S4R196 498 aa13.91□□□□□ -0.18
Cln3-201ENSMUST00000032962 Olfr247E9PVJ7 320 aa13.91□□□□□ -0.18
Cln3-201ENSMUST00000032962 Olfr819K7N727 320 aa13.91□□□□□ -0.18
Cln3-201ENSMUST00000032962 Hsp90b1P08113 802 aaKnown RBP13.91□□□□□ -0.18
Cln3-201ENSMUST00000032962 Lmod1Q8BVA4 595 aa13.91□□□□□ -0.18
Cln3-201ENSMUST00000032962 Ift57Q8BXG3 429 aa13.91□□□□□ -0.18
Cln3-201ENSMUST00000032962 Rnaseh2aQ9CWY8 301 aa13.91□□□□□ -0.18
Cln3-201ENSMUST00000032962 Frmpd3A0A140LIW3 1774 aa13.91□□□□□ -0.18
Cln3-201ENSMUST00000032962 Cfap70D3YVL2 1141 aa13.9□□□□□ -0.18
Cln3-201ENSMUST00000032962 Ercc3P49135 783 aa13.9□□□□□ -0.18
Cln3-201ENSMUST00000032962 Pla2g4fQ50L41 855 aa13.9□□□□□ -0.18
Cln3-201ENSMUST00000032962 Ube3cQ80U95 1083 aa13.9□□□□□ -0.18
Cln3-201ENSMUST00000032962 Lmbrd2Q8C561 694 aa13.9□□□□□ -0.18
Cln3-201ENSMUST00000032962 Tshz3Q8CGV9 1081 aa13.9□□□□□ -0.18
Cln3-201ENSMUST00000032962 NsmfQ99NF2 532 aa13.9□□□□□ -0.18
Cln3-201ENSMUST00000032962 Smarce1O54941 411 aaKnown RBP13.9□□□□□ -0.18
Cln3-201ENSMUST00000032962 Csrnp1P59054 583 aa13.9□□□□□ -0.18
Cln3-201ENSMUST00000032962 ZyxQ62523 564 aa13.9□□□□□ -0.18
Cln3-201ENSMUST00000032962 Kiaa0753Q6A000 959 aa13.9□□□□□ -0.18
Cln3-201ENSMUST00000032962 Glis3Q6XP49 780 aa13.9□□□□□ -0.18
Cln3-201ENSMUST00000032962 Krt25Q8VCW2 446 aa13.9□□□□□ -0.18
Cln3-201ENSMUST00000032962 Noc3lQ8VI84 807 aaKnown RBP13.9□□□□□ -0.18
Cln3-201ENSMUST00000032962 NcapgE9PWG6 1004 aa13.89□□□□□ -0.19
Cln3-201ENSMUST00000032962 Gjd4Q8BSD4 364 aa13.89□□□□□ -0.19
Cln3-201ENSMUST00000032962 Olfml1Q8BSH2 233 aa13.89□□□□□ -0.19
Cln3-201ENSMUST00000032962 KinQ8K339 391 aa13.89□□□□□ -0.19
Cln3-201ENSMUST00000032962 Cyp2d10P24456 504 aa13.89□□□□□ -0.19
Cln3-201ENSMUST00000032962 Tbc1d30Q69ZT9 766 aa13.89□□□□□ -0.19
Cln3-201ENSMUST00000032962 Scaf8Q6DID3 1268 aa13.89□□□□□ -0.19
Cln3-201ENSMUST00000032962 Atp2b4Q6Q477 1205 aa13.89□□□□□ -0.19
Cln3-201ENSMUST00000032962 Plekhg6Q8R0J1 787 aa13.89□□□□□ -0.19
Cln3-201ENSMUST00000032962 WaslQ91YD9 501 aa13.89□□□□□ -0.19
Cln3-201ENSMUST00000032962 Ccdc7Q9D541 371 aa13.89□□□□□ -0.19
Cln3-201ENSMUST00000032962 Cyp2c68K7N6C2 491 aa13.88□□□□□ -0.19
Cln3-201ENSMUST00000032962 SfswapQ3USH5 945 aaKnown RBP13.88□□□□□ -0.19
Cln3-201ENSMUST00000032962 Utp18Q5SSI6 552 aaKnown RBP13.88□□□□□ -0.19
Cln3-201ENSMUST00000032962 Edrf1Q6GQV7 1239 aa13.88□□□□□ -0.19
Cln3-201ENSMUST00000032962 PrimpolQ6P1E7 537 aa13.88□□□□□ -0.19
Cln3-201ENSMUST00000032962 Gtf2iQ9ESZ8 998 aaKnown RBP13.88□□□□□ -0.19
Cln3-201ENSMUST00000032962 Pmfbp1Q9WVQ0 1022 aa13.88□□□□□ -0.19
Cln3-201ENSMUST00000032962 Ccdc173A0JLY1 547 aa13.88□□□□□ -0.19
Cln3-201ENSMUST00000032962 Mdm2P23804 489 aa13.88□□□□□ -0.19
Cln3-201ENSMUST00000032962 Large2Q5XPT3 690 aa13.88□□□□□ -0.19
Cln3-201ENSMUST00000032962 Pdzrn3Q69ZS0 1063 aa13.88□□□□□ -0.19
Cln3-201ENSMUST00000032962 Mrps5Q99N87 432 aaKnown RBP13.88□□□□□ -0.19
Cln3-201ENSMUST00000032962 Heg1E9Q7X6 1337 aa13.88□□□□□ -0.19
Cln3-201ENSMUST00000032962 Igf2rQ07113 2483 aaKnown RBP13.87□□□□□ -0.19
Cln3-201ENSMUST00000032962 Cdcp1Q5U462 833 aa13.87□□□□□ -0.19
Cln3-201ENSMUST00000032962 Ddx19aQ61655 478 aaKnown RBP13.87□□□□□ -0.19
Cln3-201ENSMUST00000032962 Jakmip1Q8BVL9 626 aa13.87□□□□□ -0.19
Cln3-201ENSMUST00000032962 Ccar2Q8VDP4 922 aaKnown RBP13.87□□□□□ -0.19
Cln3-201ENSMUST00000032962 Mroh6V9GX81 722 aa13.87□□□□□ -0.19
Cln3-201ENSMUST00000032962 Krt24A1L317 512 aa13.87□□□□□ -0.19
Cln3-201ENSMUST00000032962 Cyp3a57D3YYZ0 503 aa13.87□□□□□ -0.19
Cln3-201ENSMUST00000032962 Elmsan1E9Q2I4 1089 aaKnown RBP13.87□□□□□ -0.19
Cln3-201ENSMUST00000032962 Siah1aP61092 282 aa13.87□□□□□ -0.19
Cln3-201ENSMUST00000032962 Bach2P97303 839 aa13.87□□□□□ -0.19
Cln3-201ENSMUST00000032962 Ppp1r21Q3TDD9 780 aa13.87□□□□□ -0.19
Cln3-201ENSMUST00000032962 Best3Q6H1V1 669 aa13.87□□□□□ -0.19
Cln3-201ENSMUST00000032962 Tbc1d31Q6NXY1 996 aa13.87□□□□□ -0.19
Cln3-201ENSMUST00000032962 Ptrh1Q8BW00 204 aa13.87□□□□□ -0.19
Cln3-201ENSMUST00000032962 Tmem266Q8BZB3 538 aa13.87□□□□□ -0.19
Cln3-201ENSMUST00000032962 Rps6ka5Q8C050 863 aa13.87□□□□□ -0.19
Cln3-201ENSMUST00000032962 Uba5Q8VE47 403 aa13.87□□□□□ -0.19
Cln3-201ENSMUST00000032962 Tbc1d7Q9D0K0 293 aa13.87□□□□□ -0.19
Cln3-201ENSMUST00000032962 UvssaQ9D479 717 aa13.87□□□□□ -0.19
Cln3-201ENSMUST00000032962 Ms4a2P20490 235 aa13.86□□□□□ -0.19
Cln3-201ENSMUST00000032962 AaasP58742 546 aa13.86□□□□□ -0.19
Cln3-201ENSMUST00000032962 RarsQ9D0I9 660 aaKnown RBP13.86□□□□□ -0.19
Cln3-201ENSMUST00000032962 Slx4ipQ9D7Y9 413 aa13.86□□□□□ -0.19
Cln3-201ENSMUST00000032962 IcoslgQ9JHJ8 322 aa13.86□□□□□ -0.19
Cln3-201ENSMUST00000032962 Lekr1B2RVN1 116 aa13.86□□□□□ -0.19
Cln3-201ENSMUST00000032962 Wdr78E9PYY5 807 aa13.86□□□□□ -0.19
Cln3-201ENSMUST00000032962 Gm5592Q3V0A6 857 aa13.86□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 45.6 ms