RNA–Protein interactions for RNA: ENSMUST00000032962.10

Cln3-201, Transcript of Battenin, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Cln3, Length 2,386 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3-201ENSMUST00000032962 NischQ80TM9 1593 aa24.52■■□□□ 1.51
Cln3-201ENSMUST00000032962 Gm35339A0A140LHH9 1649 aa24.32■■□□□ 1.48
Cln3-201ENSMUST00000032962 Abcc9P70170 1546 aa23.65■■□□□ 1.38
Cln3-201ENSMUST00000032962 Abcc8B2RUS7 1588 aa23.54■■□□□ 1.36
Cln3-201ENSMUST00000032962 ScribQ80U72 1612 aa22.51■■□□□ 1.19
Cln3-201ENSMUST00000032962 Rhox8Q6VSS7 320 aa22.04■■□□□ 1.12
Cln3-201ENSMUST00000032962 Kdm5dQ62240 1548 aa21.88■■□□□ 1.09
Cln3-201ENSMUST00000032962 NacadQ5SWP3 1504 aa21.73■■□□□ 1.07
Cln3-201ENSMUST00000032962 Dcaf1Q80TR8 1506 aa21.49■■□□□ 1.03
Cln3-201ENSMUST00000032962 Rb1cc1Q9ESK9 1588 aa21.4■■□□□ 1.02
Cln3-201ENSMUST00000032962 Sycp2Q9CUU3 1500 aa21.33■■□□□ 1
Cln3-201ENSMUST00000032962 BicraF8VPZ9 1578 aa21.06■□□□□ 0.96
Cln3-201ENSMUST00000032962 Baz1aO88379 1555 aa21.03■□□□□ 0.96
Cln3-201ENSMUST00000032962 Zcchc6Q5BLK4 1491 aaKnown RBP20.95■□□□□ 0.94
Cln3-201ENSMUST00000032962 Ccdc180J3QNE4 1664 aa20.68■□□□□ 0.9
Cln3-201ENSMUST00000032962 Crybg2B7ZCC2 1516 aa20.68■□□□□ 0.9
Cln3-201ENSMUST00000032962 Ccdc136Q3TVA9 1136 aa20.65■□□□□ 0.9
Cln3-201ENSMUST00000032962 Cecr2E9Q2Z1 1453 aa20.52■□□□□ 0.88
Cln3-201ENSMUST00000032962 Smarca2Q6DIC0 1577 aa20.47■□□□□ 0.87
Cln3-201ENSMUST00000032962 Dnajc5bQ9CQ94 199 aa20.35■□□□□ 0.85
Cln3-201ENSMUST00000032962 Rtl1Q7M732 1744 aa20.34■□□□□ 0.85
Cln3-201ENSMUST00000032962 Pds5bQ4VA53 1446 aaKnown RBP20.25■□□□□ 0.83
Cln3-201ENSMUST00000032962 Atad2bE9Q166 1460 aaKnown RBP20.17■□□□□ 0.82
Cln3-201ENSMUST00000032962 Smarca4Q3TKT4 1613 aaKnown RBP20.16■□□□□ 0.82
Cln3-201ENSMUST00000032962 Iqgap2Q3UQ44 1575 aa20.06■□□□□ 0.8
Cln3-201ENSMUST00000032962 Synj1Q8CHC4 1574 aa20.01■□□□□ 0.79
Cln3-201ENSMUST00000032962 CftrP26361 1476 aa19.96■□□□□ 0.79
Cln3-201ENSMUST00000032962 Trim41Q5NCC3 630 aa19.94■□□□□ 0.78
Cln3-201ENSMUST00000032962 Brd4Q9ESU6 1400 aaKnown RBP19.94■□□□□ 0.78
Cln3-201ENSMUST00000032962 Esf1Q3V1V3 845 aaKnown RBP19.94■□□□□ 0.78
Cln3-201ENSMUST00000032962 Thoc2B1AZI6 1594 aaKnown RBP19.91■□□□□ 0.78
Cln3-201ENSMUST00000032962 Ercc6F8VPZ5 1481 aa19.88■□□□□ 0.77
Cln3-201ENSMUST00000032962 Frmpd1A2AKB4 1549 aa19.86■□□□□ 0.77
Cln3-201ENSMUST00000032962 Wdr62Q3U3T8 1523 aa19.78■□□□□ 0.76
Cln3-201ENSMUST00000032962 Cc2d2aQ8CFW7 1633 aa19.78■□□□□ 0.76
Cln3-201ENSMUST00000032962 Cttnbp2B9EJA2 1648 aa19.77■□□□□ 0.76
Cln3-201ENSMUST00000032962 Cngb1E1AZ71 1325 aa19.76■□□□□ 0.75
Cln3-201ENSMUST00000032962 Ubl4bQ9CQ84 188 aa19.64■□□□□ 0.73
Cln3-201ENSMUST00000032962 Phldb1Q6PDH0 1371 aaKnown RBP19.59■□□□□ 0.73
Cln3-201ENSMUST00000032962 Unc13aQ4KUS2 1712 aa19.53■□□□□ 0.72
Cln3-201ENSMUST00000032962 Fam135aQ6NS59 1506 aa19.51■□□□□ 0.71
Cln3-201ENSMUST00000032962 Golga3P55937 1487 aa19.45■□□□□ 0.7
Cln3-201ENSMUST00000032962 Rpgrip1Q9EPQ2 1331 aa19.43■□□□□ 0.7
Cln3-201ENSMUST00000032962 Kif15Q6P9L6 1387 aa19.4■□□□□ 0.7
Cln3-201ENSMUST00000032962 Il27Q8K3I6 234 aa19.38■□□□□ 0.69
Cln3-201ENSMUST00000032962 Chic1Q8CBW7 227 aa19.35■□□□□ 0.69
Cln3-201ENSMUST00000032962 Rsf1E9PWW9 1441 aaKnown RBP19.32■□□□□ 0.68
Cln3-201ENSMUST00000032962 Top2bQ64511 1612 aa19.28■□□□□ 0.68
Cln3-201ENSMUST00000032962 Ccdc88bQ4QRL3 1481 aa19.28■□□□□ 0.68
Cln3-201ENSMUST00000032962 Cux2P70298 1426 aa19.26■□□□□ 0.67
Cln3-201ENSMUST00000032962 Mrc2Q64449 1479 aa19.18■□□□□ 0.66
Cln3-201ENSMUST00000032962 Lamc3Q9R0B6 1581 aa19.15■□□□□ 0.66
Cln3-201ENSMUST00000032962 Npm1Q61937 292 aaKnown RBP19.14■□□□□ 0.66
Cln3-201ENSMUST00000032962 Gab3Q8BSM5 595 aa19.1■□□□□ 0.65
Cln3-201ENSMUST00000032962 Fmn1Q05860 1466 aa19.07■□□□□ 0.64
Cln3-201ENSMUST00000032962 TnnQ80Z71 1560 aa19.02■□□□□ 0.64
Cln3-201ENSMUST00000032962 HrcG5E8J6 738 aa18.99■□□□□ 0.63
Cln3-201ENSMUST00000032962 Acin1Q9JIX8 1338 aaKnown RBP18.99■□□□□ 0.63
Cln3-201ENSMUST00000032962 Ccdc18Q640L5 1455 aa18.95■□□□□ 0.62
Cln3-201ENSMUST00000032962 Kif21aQ9QXL2 1672 aa18.94■□□□□ 0.62
Cln3-201ENSMUST00000032962 Camsap1A2AHC3 1581 aa18.93■□□□□ 0.62
Cln3-201ENSMUST00000032962 Cep164Q5DU05 1446 aa18.92■□□□□ 0.62
Cln3-201ENSMUST00000032962 Baz1bQ9Z277 1479 aa18.88■□□□□ 0.61
Cln3-201ENSMUST00000032962 Dhx29Q6PGC1 1365 aaKnown RBP18.88■□□□□ 0.61
Cln3-201ENSMUST00000032962 LrpprcQ6PB66 1392 aaKnown RBP18.87■□□□□ 0.61
Cln3-201ENSMUST00000032962 Top2aQ01320 1528 aaKnown RBP18.82■□□□□ 0.6
Cln3-201ENSMUST00000032962 PtprkP35822 1457 aa18.78■□□□□ 0.6
Cln3-201ENSMUST00000032962 Npm2Q80W85 207 aa18.76■□□□□ 0.59
Cln3-201ENSMUST00000032962 Plb1Q3TTY0 1478 aa18.76■□□□□ 0.59
Cln3-201ENSMUST00000032962 Grin2bQ01097 1482 aa18.76■□□□□ 0.59
Cln3-201ENSMUST00000032962 Lrriq1Q0P5X1 1673 aa18.76■□□□□ 0.59
Cln3-201ENSMUST00000032962 PogzQ8BZH4 1409 aaKnown RBP18.74■□□□□ 0.59
Cln3-201ENSMUST00000032962 Duox2A2AQ99 1517 aa18.73■□□□□ 0.59
Cln3-201ENSMUST00000032962 Urb2E9Q7L1 1524 aaKnown RBP18.7■□□□□ 0.58
Cln3-201ENSMUST00000032962 Zeb1Q64318 1117 aa18.7■□□□□ 0.58
Cln3-201ENSMUST00000032962 Ehmt2Q9Z148 1263 aaKnown RBP18.68■□□□□ 0.58
Cln3-201ENSMUST00000032962 Crocc2F6XLV1 1638 aa18.66■□□□□ 0.58
Cln3-201ENSMUST00000032962 Myt1lP97500 1187 aa18.64■□□□□ 0.58
Cln3-201ENSMUST00000032962 Rad54l2Q99NG0 1466 aa18.61■□□□□ 0.57
Cln3-201ENSMUST00000032962 Rapgef2Q8CHG7 1496 aa18.6■□□□□ 0.57
Cln3-201ENSMUST00000032962 Samd9lQ69Z37 1561 aa18.59■□□□□ 0.57
Cln3-201ENSMUST00000032962 Shroom4Q1W617 1475 aa18.55■□□□□ 0.56
Cln3-201ENSMUST00000032962 NrkQ9R0G8 1455 aa18.55■□□□□ 0.56
Cln3-201ENSMUST00000032962 Efcab5A0JP43 1406 aa18.54■□□□□ 0.56
Cln3-201ENSMUST00000032962 Disp1Q3TDN0 1521 aa18.48■□□□□ 0.55
Cln3-201ENSMUST00000032962 Pcgf6Q99NA9 353 aa18.43■□□□□ 0.54
Cln3-201ENSMUST00000032962 Cep162Q6ZQ06 1403 aa18.43■□□□□ 0.54
Cln3-201ENSMUST00000032962 Arhgap35Q91YM2 1499 aa18.4■□□□□ 0.54
Cln3-201ENSMUST00000032962 Ift140E9PY46 1464 aa18.39■□□□□ 0.53
Cln3-201ENSMUST00000032962 Magi3Q9EQJ9 1476 aa18.37■□□□□ 0.53
Cln3-201ENSMUST00000032962 Eif4g3Q80XI3 1579 aaKnown RBP18.36■□□□□ 0.53
Cln3-201ENSMUST00000032962 Grin2aP35436 1464 aa18.36■□□□□ 0.53
Cln3-201ENSMUST00000032962 Mroh2bQ7M6Y6 1581 aa18.36■□□□□ 0.53
Cln3-201ENSMUST00000032962 Setd1bQ8CFT2 1985 aa18.33■□□□□ 0.53
Cln3-201ENSMUST00000032962 SynmQ70IV5 1561 aa18.32■□□□□ 0.52
Cln3-201ENSMUST00000032962 Pla2r1Q62028 1487 aa18.32■□□□□ 0.52
Cln3-201ENSMUST00000032962 Ap3b1Q9Z1T1 1105 aa18.3■□□□□ 0.52
Cln3-201ENSMUST00000032962 Nup160Q9Z0W3 1402 aaKnown RBP18.29■□□□□ 0.52
Cln3-201ENSMUST00000032962 Rusc2Q80U22 1514 aa18.26■□□□□ 0.51
Cln3-201ENSMUST00000032962 Pelp1Q9DBD5 1123 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms