RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 Lrrc2Q8VDB8 371 aa9.18□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Lonrf3Q9D4H7 753 aa9.18□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Ube3bQ9ES34 1070 aa9.18□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Add2Q9QYB8 725 aa9.18□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Fkbp1aP26883 108 aaKnown RBP9.18□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Me3Q8BMF3 604 aa9.18□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 HlfQ8BW74 295 aa9.18□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 SowahdQ8BY98 327 aa9.18□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Tubb6Q922F4 447 aa9.18□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Utp3Q9JI13 469 aaKnown RBP9.18□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Setdb1O88974 1307 aa9.18□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Myo5bP21271 1818 aa9.18□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Krt24A1L317 512 aa9.18□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 FanccP50652 591 aa9.18□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Zdhhc9P59268 364 aa9.18□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Edrf1Q6GQV7 1239 aa9.18□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 U2af1l4Q8BGJ9 220 aa9.18□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Ano1Q8BHY3 960 aa9.18□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 9230110C19RikQ8CC70 267 aa9.18□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Mical1Q8VDP3 1048 aa9.18□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Zfp142G5E869 1843 aa9.18□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 MeiocA2AG06 965 aa9.17□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Stx8O88983 236 aa9.17□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 McamQ8R2Y2 648 aaKnown RBP9.17□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Dynll1P63168 89 aa9.17□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Nxf7Q80SZ6 620 aaKnown RBP9.17□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Ces1dQ8VCT4 565 aa9.17□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Gdf11Q9Z1W4 405 aa9.17□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 A0A1W2P7S8 802 aa9.17□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Metap2O08663 478 aaKnown RBP9.17□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Gtf2f1Q3THK3 508 aaKnown RBP9.17□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Cdc5lQ6A068 802 aaKnown RBP9.17□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Znf18Q810A1 556 aa9.17□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 BccipQ9CWI3 316 aa9.17□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Usp42B2RQC2 1324 aaKnown RBP9.17□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Dlg5E9Q9R9 1921 aa9.16□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Cntnap1O54991 1385 aa9.16□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Atp6v1aP50516 617 aaKnown RBP9.16□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Spg7Q3ULF4 781 aa9.16□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 TrhQ62361 256 aa9.16□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 CpzQ8R4V4 654 aa9.16□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Ccdc7Q9D541 371 aa9.16□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 FliiQ9JJ28 1271 aa9.16□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Tuft1O08970 390 aa9.16□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 NfixP70257 488 aa9.16□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Q8C6G1 249 aa9.16□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Ccdc178Q8CDV0 866 aa9.16□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Pik3ap1Q9EQ32 811 aa9.16□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Krt85Q9Z2T6 507 aa9.16□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Col4a1P02463 1669 aa9.16□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Lipo1J3QME6 396 aa9.16□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Il15P48346 162 aa9.16□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Ubash3aQ3V3E1 624 aa9.16□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Bmp2kQ91Z96 1138 aa9.16□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Mrps25Q9D125 171 aaKnown RBP9.16□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Mrpl12Q9DB15 201 aaKnown RBP9.16□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Kcnq5Q9JK45 933 aa9.16□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Stat5bP42232 786 aa9.15□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Irx3P81067 507 aa9.15□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Ccdc82Q6PG04 518 aa9.15□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Usp44Q8C2S0 711 aa9.15□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Nup88Q8CEC0 753 aaKnown RBP9.15□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Eaf2Q91ZD6 262 aa9.15□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Glipr1l2Q9CQ35 332 aa9.15□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Mrpl44Q9CY73 333 aaKnown RBP9.15□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Tpd52l1O54818 204 aa9.15□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 NppbP40753 121 aa9.15□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Mxd3Q80US8 206 aa9.15□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Uba5Q8VE47 403 aa9.15□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Stk38Q91VJ4 465 aa9.15□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 BrapQ99MP8 591 aa9.15□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Lgr5Q9Z1P4 907 aa9.15□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Snapc4Q8BP86 1333 aa9.14□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Ctdnep1Q3TP92 244 aa9.14□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Cyp2d9P11714 504 aa9.14□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Dnm1P39053 867 aa9.14□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Csrnp1P59054 583 aa9.14□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Tut1Q8R3F9 869 aa9.14□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 WtapQ9ER69 396 aa9.14□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Ssc5dQ8BV57 1371 aa9.14□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 LyarQ08288 388 aaKnown RBP9.14□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 4930523C07RikE9Q2T4 99 aa9.13□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Npy5rO70342 466 aa9.13□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Ddit3P35639 168 aa9.13□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 1810065E05RikQ5NC41 235 aa9.13□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Atad2Q8CDM1 1040 aa9.13□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 4931400O07RikQ9D4M5 137 aa9.13□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Ndufa8Q9DCJ5 172 aa9.13□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Zfp804bA0A0G2JGH6 1343 aa9.13□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Mctp1E9PV86 951 aa9.13□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Esyt1Q3U7R1 1092 aaKnown RBP9.13□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Large2Q5XPT3 690 aa9.13□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Ube3cQ80U95 1083 aa9.13□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Acnat2Q8BGG9 420 aa9.13□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Gtf2iQ9ESZ8 998 aaKnown RBP9.13□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Ankrd63A2ARS0 390 aa9.13□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 ImpactO55091 318 aa9.13□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Vars2Q3U2A8 1060 aa9.13□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Gm5592Q3V0A6 857 aa9.13□□□□□ -0.95
Ccdc39-201ENSMUST00000029222 Otop3Q80UF9 577 aa9.13□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms