RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 Sh3bp1P55194 680 aa17.14■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Lonp2Q9DBN5 852 aa17.14■□□□□ 0.33
Col2a1-201ENSMUST00000023123 AU022751B1B0V2 589 aa17.14■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Krt77Q6IFZ6 572 aa17.14■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Dnajc21E9Q8D0 531 aa17.14■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Ankrd35E9Q9D8 996 aa17.14■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Pex1Q5BL07 1284 aa17.14■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Ncaph2Q8BSP2 607 aa17.14■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Frat2Q8K025 231 aa17.14■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Mrps25Q9D125 171 aaKnown RBP17.14■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Shroom2A2ALU4 1481 aa17.14■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Pola1P33609 1465 aa17.14■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Spocd1B1ASB6 936 aa17.14■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Mtx1P47802 317 aa17.14■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Haus1Q8BHX1 278 aa17.14■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Fam213aQ9CYH2 218 aa17.14■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Kcnh3Q9WVJ0 1095 aa17.14■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Zscan25B2RX31 543 aa17.13■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Exoc3l2D3YUP5 789 aa17.13■□□□□ 0.33
Col2a1-201ENSMUST00000023123 MycnP03966 462 aaKnown RBP17.13■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Aimp1P31230 310 aaKnown RBP17.13■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Neurog2P70447 263 aa17.13■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Fam170aQ66LM6 333 aa17.13■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Naa25Q8BWZ3 972 aa17.13■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Bmp2kQ91Z96 1138 aa17.13■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Senp1P59110 640 aa17.13■□□□□ 0.33
Col2a1-201ENSMUST00000023123 EsrrbQ61539 433 aa17.13■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Nek5Q7TSC3 627 aa17.13■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Ccdc38Q8CDN8 563 aa17.13■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Ccdc105Q9D4K7 499 aa17.13■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Q8BZJ8 459 aa17.13■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Col4a3bpQ9EQG9 624 aa17.13■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Fmnl3Q6ZPF4 1028 aa17.13■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Samd15F6XZJ7 620 aa17.12■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Zfp51Q3U4L8 781 aa17.12■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Leo1Q5XJE5 667 aa17.12■□□□□ 0.33
Col2a1-201ENSMUST00000023123 2310002L09RikQ9D7L5 217 aa17.12■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Stk36Q69ZM6 1316 aa17.12■□□□□ 0.33
Col2a1-201ENSMUST00000023123 HellsQ60848 821 aa17.12■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Csrnp2Q8BGQ2 534 aa17.12■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Lmod1Q8BVA4 595 aa17.12■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Erbb3Q61526 1339 aa17.12■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Tmem132eQ6IEE6 982 aa17.12■□□□□ 0.33
Col2a1-201ENSMUST00000023123 4930548H24RikQ9D496 437 aa17.12■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Gm5934D3Z4U6 212 aa17.11■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Rnf216P58283 853 aa17.11■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Sdccag8Q80UF4 717 aa17.11■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Amotl2Q8K371 772 aa17.11■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Kif17Q99PW8 1038 aa17.11■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Dph6Q9CQ28 267 aa17.11■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Apol7aB2RT54 418 aa17.11■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Sept7O55131 436 aa17.11■□□□□ 0.33
Col2a1-201ENSMUST00000023123 FanccP50652 591 aa17.11■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Agbl1Q09M05 972 aa17.11■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Nip7Q9CXK8 180 aaKnown RBP17.11■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Cdca7Q9D0M2 382 aa17.11■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Akr1c19G3X9Y6 323 aa17.11■□□□□ 0.33
Col2a1-201ENSMUST00000023123 ByslO54825 436 aaKnown RBP17.11■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Eef1dP57776 281 aaKnown RBP17.11■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Pde5aQ8CG03 865 aa17.11■□□□□ 0.33
Col2a1-201ENSMUST00000023123 SltmQ8CH25 1031 aaKnown RBP17.11■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Cib2Q9Z309 187 aa17.11■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Ptcd1Q8C2E4 695 aaKnown RBP17.11■□□□□ 0.33
Col2a1-201ENSMUST00000023123 P4ha1Q60715 534 aa17.1■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Wdr3Q8BHB4 942 aaKnown RBP17.1■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Synpo2Q91YE8 1087 aaKnown RBP17.1■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Ttc5Q99LG4 440 aa17.1■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Mapkbp1Q6NS57 1503 aa17.1■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Gm5624F6ZZG8 207 aa17.1■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Gm5935Q497S0 212 aa17.1■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Ddx49Q4FZF3 480 aaKnown RBP17.1■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Ift20Q61025 132 aa17.1■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Tab2Q99K90 693 aa17.1■□□□□ 0.33
Col2a1-201ENSMUST00000023123 ZfxP17012 799 aa17.1■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Apol7cQ8C6E1 369 aa17.1■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Tmem143Q8VD26 458 aa17.1■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Mybpc2Q5XKE0 1136 aa17.1■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Zfp202Q8C879 641 aa17.1■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Efcab2Q9CQ46 164 aa17.1■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Naip7Q9JIB3 1402 aa17.1■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Gna11P21278 359 aa17.09■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Eef2P58252 858 aaKnown RBP17.09■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Hexim1Q8R409 356 aaKnown RBP17.09■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Trim6Q8BGE7 488 aa17.09■□□□□ 0.33
Col2a1-201ENSMUST00000023123 SdsQ8VBT2 327 aa17.09■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Ccdc89Q9DA73 370 aa17.09■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Xpo4Q9ESJ0 1151 aa17.09■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Clip2Q9Z0H8 1047 aa17.09■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Gpr161B2RPY5 545 aa17.09■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Pym1Q8CHP5 203 aaKnown RBP17.09■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Caprin2Q05A80 1031 aaKnown RBP17.09■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Map3k9Q3U1V8 1077 aa17.09■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Mcm7Q61881 719 aaKnown RBP17.09■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Tsnaxip1Q99P25 704 aa17.09■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Tldc2A2ACG1 198 aa17.08■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Hmgb2P30681 210 aaKnown RBP17.08■□□□□ 0.33
Col2a1-201ENSMUST00000023123 MmeQ61391 750 aa17.08■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Gimap8Q75N62 688 aa17.08■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Depdc1bQ8BH88 529 aa17.08■□□□□ 0.33
Col2a1-201ENSMUST00000023123 Pcdhb22Q91XZ8 794 aa17.08■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms