RNA–Protein interactions for RNA: ENSMUST00000020163.6

Nedd1-201, Transcript of Protein NEDD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nedd1, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd1-201ENSMUST00000020163 Ercc3P49135 783 aa11.46□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Stk38Q91VJ4 465 aa11.46□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Lrrfip2Q91WK0 415 aa11.46□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Clic4Q9QYB1 253 aa11.46□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Pde11aP0C1Q2 933 aa11.45□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Sptlc2P97363 560 aaKnown RBP11.45□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Map3k2Q61083 619 aa11.45□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Gm21985Q6P6P5 1106 aa11.45□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Nat10Q8K224 1024 aaKnown RBP11.45□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Smc1bQ920F6 1248 aa11.45□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Cfap99A0A140LIX9 648 aa11.45□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Chrm1P12657 460 aa11.45□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Gsdma3Q5Y4Y6 464 aa11.45□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Fut8Q9WTS2 575 aa11.45□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Wdr19Q3UGF1 1341 aa11.45□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Rims2Q9EQZ7 1530 aa11.45□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Ddx60E9PZQ1 1711 aa11.45□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Diaph1O08808 1255 aa11.44□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Cct2P80314 535 aaKnown RBP11.44□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Cgref1Q8R1U2 281 aa11.44□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Col1a2Q01149 1372 aa11.44□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Acbd5Q5XG73 508 aa11.44□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Dennd6aQ8BH65 605 aa11.44□□□□□ -0.58
Nedd1-201ENSMUST00000020163 BbxQ8VBW5 907 aa11.44□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Nlgn1Q99K10 843 aa11.44□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Cbx8Q9QXV1 362 aa11.44□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Pfkfb1P70266 471 aa11.44□□□□□ -0.58
Nedd1-201ENSMUST00000020163 4930504O13RikQ8C5Z9 145 aa11.44□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Mon2Q80TL7 1715 aa11.43□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Abcc10Q8R4P9 1501 aa11.43□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Sall1Q9ER74 1322 aa11.43□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Rbbp8nlA2ABX0 614 aa11.43□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Ccng2O08918 344 aa11.43□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Prl7a2O54831 253 aa11.43□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Grm8P47743 908 aa11.43□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Tubb4bP68372 445 aaKnown RBP11.43□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Gm28047Q3US59 414 aa11.43□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Arhgef1Q61210 920 aaKnown RBP11.43□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Fchsd1Q6PFY1 688 aa11.43□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Coro7Q9D2V7 922 aa11.43□□□□□ -0.58
Nedd1-201ENSMUST00000020163 NefhP19246 1090 aa11.43□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Ano8Q6PB70 1060 aa11.43□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Fsd1Q7TPM6 496 aa11.43□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Ppp2r3dQ9Z176 491 aa11.43□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Ubap1lG3UW59 384 aa11.43□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Hoxc9P09633 260 aa11.43□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Znhit6Q3UFB2 460 aaKnown RBP11.43□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Dpf2Q61103 391 aaKnown RBP11.43□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Fbxo41Q6NS60 873 aa11.43□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Mb21d2Q8C525 428 aa11.43□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Terf2ipQ91VL8 393 aa11.43□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Erc1Q99MI1 1120 aa11.43□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Large1Q9Z1M7 756 aa11.43□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Pola2P33611 600 aa11.42□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Asnsd1Q8BFS9 627 aa11.42□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Ehd2Q8BH64 543 aa11.42□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Pms1Q8K119 917 aa11.42□□□□□ -0.58
Nedd1-201ENSMUST00000020163 RabggtaQ9JHK4 567 aa11.42□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Npdc1Q64322 332 aa11.42□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Q66JV7 365 aa11.42□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Ncaph2Q8BSP2 607 aa11.42□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Ppfibp1Q8C8U0 969 aaKnown RBP11.42□□□□□ -0.58
Nedd1-201ENSMUST00000020163 OptnQ8K3K8 584 aa11.42□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Ccdc12Q8R344 166 aaKnown RBP11.42□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Cabp4Q8VHC5 271 aa11.42□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Amotl1Q9D4H4 968 aa11.42□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Trim55G3X8Y1 545 aa11.42□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Kifc2O08672 792 aa11.42□□□□□ -0.58
Nedd1-201ENSMUST00000020163 PsapQ61207 557 aaKnown RBP11.42□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Tubb2aQ7TMM9 445 aa11.42□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Map3k11Q80XI6 850 aa11.42□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Tubb2bQ9CWF2 445 aa11.42□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Scn4aQ9ER60 1841 aa11.41□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Cdr2P97817 455 aa11.41□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Jakmip3Q5DTN8 844 aa11.41□□□□□ -0.58
Nedd1-201ENSMUST00000020163 DbnlQ62418 436 aa11.41□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Atad2Q8CDM1 1040 aa11.41□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Tmem119Q8R138 280 aa11.41□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Card14Q99KF0 999 aa11.41□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Cdc45Q9Z1X9 566 aa11.41□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Sycp2lA0A0M3U1B0 842 aa11.41□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Fkbp4P30416 458 aa11.41□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Hpcal4Q8BGZ1 191 aa11.41□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Cdc23Q8BGZ4 597 aa11.41□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Klhl30Q8C3F7 581 aa11.41□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Krt222Q8CCX5 294 aa11.4□□□□□ -0.58
Nedd1-201ENSMUST00000020163 SdsQ8VBT2 327 aa11.4□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Tc2nQ91XT6 489 aa11.4□□□□□ -0.58
Nedd1-201ENSMUST00000020163 MbipQ99LQ1 341 aa11.4□□□□□ -0.58
Nedd1-201ENSMUST00000020163 PdclQ9DBX2 301 aa11.4□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Slit1Q80TR4 1531 aa11.4□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Slit3Q9WVB4 1523 aa11.4□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Rreb1Q3UH06 1700 aaKnown RBP11.4□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Usp42B2RQC2 1324 aaKnown RBP11.4□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Nckap5lQ6GQX2 1323 aa11.4□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Dnajc25A2ALW5 357 aa11.4□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Gm42641I6L9G2 585 aa11.4□□□□□ -0.58
Nedd1-201ENSMUST00000020163 AcrbpQ3V140 540 aa11.4□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Ddx58Q6Q899 926 aa11.4□□□□□ -0.58
Nedd1-201ENSMUST00000020163 Cfap100Q80VN0 613 aa11.4□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms