RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Cwc25Q9DBF7 416 aa13.9□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Cyp2d10P24456 504 aa13.9□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Trak2Q6P9N8 913 aa13.9□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Trim56Q80VI1 734 aaKnown RBP13.9□□□□□ -0.18
Rfx1-201ENSMUST00000005600 C3P01027 1663 aa13.9□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Syde2E9PUP1 1314 aa13.9□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Pramel3A2AHA7 463 aa13.9□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Gm7903A2AWL1 463 aa13.9□□□□□ -0.19
Rfx1-201ENSMUST00000005600 AV320801A2AWL3 467 aa13.9□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Gm15023L7MUB4 467 aa13.9□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Hap1O35668 628 aa13.9□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Trim25Q61510 634 aaKnown RBP13.9□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Etf1Q8BWY3 437 aaKnown RBP13.9□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Kri1Q8VDQ9 704 aaKnown RBP13.9□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Efcab2Q9CQ46 164 aa13.9□□□□□ -0.19
Rfx1-201ENSMUST00000005600 CoblQ5NBX1 1337 aaKnown RBP13.89□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Eya2O08575 532 aa13.89□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Myd88P22366 296 aa13.89□□□□□ -0.19
Rfx1-201ENSMUST00000005600 CrklP47941 303 aa13.89□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Cdc37Q61081 379 aa13.89□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Asic4Q7TNS7 539 aa13.89□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Maats1Q8BRC6 783 aa13.89□□□□□ -0.19
Rfx1-201ENSMUST00000005600 4930572O03RikQ8C5Y0 211 aa13.89□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Ccdc47Q9D024 483 aaKnown RBP13.89□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Tulp1Q9Z273 543 aa13.89□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Col15a1O35206 1367 aa13.89□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Gm21663A0A0G2JE01 267 aa13.89□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Gm7361D3Z6R1 267 aa13.89□□□□□ -0.19
Rfx1-201ENSMUST00000005600 5031410I06RikE9Q4E0 267 aa13.89□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Gm1979E9QAN3 267 aa13.89□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Gm5862K7N5V5 267 aa13.89□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Gm10220K7N660 267 aa13.89□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Znf532Q6NXK2 1036 aa13.89□□□□□ -0.19
Rfx1-201ENSMUST00000005600 TnksQ6PFX9 1320 aa13.89□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Vmn2r23E9PXI5 849 aa13.88□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Slc1a4O35874 532 aa13.88□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Mcm6P97311 821 aa13.88□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Ttc19Q8CC21 365 aa13.88□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Irx2P81066 474 aa13.88□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Kcnd1Q03719 651 aa13.88□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Mctp2Q5RJH2 878 aa13.88□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Zbtb40Q6PCS8 1258 aa13.88□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Cep120Q7TSG1 988 aa13.88□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Acnat2Q8BGG9 420 aa13.88□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Tpcn2Q8BWC0 731 aa13.88□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Ric1Q69ZJ7 1422 aa13.88□□□□□ -0.19
Rfx1-201ENSMUST00000005600 NefhP19246 1090 aa13.88□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Eif3bQ8JZQ9 803 aaKnown RBP13.88□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Ppp4r3bQ922R5 820 aa13.88□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Rbm33Q9CXK9 1231 aaKnown RBP13.88□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Nbr1P97432 988 aa13.87□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Ehd2Q8BH64 543 aa13.87□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Sycp2lA0A0M3U1B0 842 aa13.87□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Prl3d2F6R3P9 224 aa13.87□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Cyp2d34L7N463 504 aa13.87□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Gabpb2P81069 414 aa13.87□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Cdkl5Q3UTQ8 938 aa13.87□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Atg9aQ68FE2 551 aa13.87□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Alg3Q8K2A8 438 aa13.87□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Fam84aQ9D650 292 aa13.87□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Dapk3O54784 448 aa13.87□□□□□ -0.19
Rfx1-201ENSMUST00000005600 ChmQ9QXG2 665 aa13.87□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Atp12aQ9Z1W8 1035 aa13.87□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Grin2dQ03391 1323 aa13.87□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Dnajc25A2ALW5 357 aa13.86□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Brd3Q8K2F0 726 aaKnown RBP13.86□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Cnot6lQ8VEG6 555 aa13.86□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Tpm3-rs7D3Z2H9 248 aa13.86□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Metap2O08663 478 aaKnown RBP13.86□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Pald1P70261 859 aa13.86□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Drc7Q6V3W6 876 aa13.86□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Asap2Q7SIG6 958 aa13.86□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Speer4bQ9D9F7 267 aa13.86□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Robo1O89026 1612 aa13.86□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Dnm1P39053 867 aa13.86□□□□□ -0.19
Rfx1-201ENSMUST00000005600 BcanQ61361 883 aa13.86□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Slc5a1Q8C3K6 665 aa13.86□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Abcb6Q9DC29 842 aa13.86□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Evc2Q8K1G2 1220 aa13.86□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Actn3O88990 900 aaKnown RBP13.85□□□□□ -0.19
Rfx1-201ENSMUST00000005600 LtkP08923 888 aa13.85□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Tshz1Q5DTH5 1084 aa13.85□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Klhl30Q8C3F7 581 aa13.85□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Slit1Q80TR4 1531 aa13.85□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Diaph1O08808 1255 aa13.85□□□□□ -0.19
Rfx1-201ENSMUST00000005600 H2afxP27661 143 aaKnown RBP13.85□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Gng11P61953 73 aa13.85□□□□□ -0.19
Rfx1-201ENSMUST00000005600 GnpatP98192 678 aa13.85□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Kmt5bQ3U8K7 883 aa13.85□□□□□ -0.19
Rfx1-201ENSMUST00000005600 IqcgQ80W32 419 aa13.85□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Tmco3Q8BH01 678 aa13.85□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Wdr3Q8BHB4 942 aaKnown RBP13.85□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Sec62Q8BU14 398 aaKnown RBP13.85□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Gm20425E9Q035 978 aaKnown RBP13.85□□□□□ -0.19
Rfx1-201ENSMUST00000005600 SrprbP47758 269 aa13.85□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Arglu1Q3UL36 271 aaKnown RBP13.85□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Large1Q9Z1M7 756 aa13.85□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Tns3Q5SSZ5 1440 aa13.85□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Wdr19Q3UGF1 1341 aa13.84□□□□□ -0.19
Rfx1-201ENSMUST00000005600 Ccng2O08918 344 aa13.84□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms