RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Appbp2Q9DAX9 585 aa17.72■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Gtf2iQ9ESZ8 998 aaKnown RBP17.72■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Mtmr2Q9Z2D1 643 aa17.72■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Gm3893E9Q1I1 302 aa17.71■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Pdzrn3Q69ZS0 1063 aa17.71■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Nek11Q8C0Q4 628 aa17.71■□□□□ 0.43
Ercc1-201ENSMUST00000003645 NsmfQ99NF2 532 aa17.71■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Tmem179Q8BHH9 233 aa17.7■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Tmc1Q8R4P5 757 aa17.7■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Top1mtQ8R4U6 593 aa17.7■□□□□ 0.42
Ercc1-201ENSMUST00000003645 PhaxQ9JJT9 385 aaKnown RBP17.7■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Ly6iQ9WU67 134 aa17.7■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Pmfbp1Q9WVQ0 1022 aa17.7■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Eddm13E9Q7F5 164 aa17.69■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Cyp2d9P11714 504 aa17.69■□□□□ 0.42
Ercc1-201ENSMUST00000003645 ArsiQ32KI9 573 aa17.69■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Glis3Q6XP49 780 aa17.69■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Znf18Q810A1 556 aa17.69■□□□□ 0.42
Ercc1-201ENSMUST00000003645 SnrkQ8VDU5 748 aa17.69■□□□□ 0.42
Ercc1-201ENSMUST00000003645 StrbpQ91WM1 672 aaKnown RBP17.69■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Nfe2l3Q9WTM4 660 aa17.69■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Pde3aQ9Z0X4 1141 aa17.69■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Kifc2O08672 792 aa17.68■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Psmd1Q3TXS7 953 aa17.68■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Ubxn10Q8BG34 277 aa17.68■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Uba5Q8VE47 403 aa17.68■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Polr3dQ91WD1 398 aa17.68■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Cxcl11Q9JHH5 100 aa17.68■□□□□ 0.42
Ercc1-201ENSMUST00000003645 IcoslgQ9JHJ8 322 aa17.68■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Col20a1Q923P0 1320 aa17.68■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Myh3P13541 1940 aa17.68■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Cfap69Q8BH53 942 aa17.67■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Olfm5Q8BU90 496 aa17.67■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Glrx3Q9CQM9 337 aa17.67■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Krt24A1L317 512 aa17.66■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Frmd7A2AD83 703 aa17.66■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Pcdhb9E9Q5G2 828 aa17.66■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Cyp2c68K7N6C2 491 aa17.66■□□□□ 0.42
Ercc1-201ENSMUST00000003645 MecomP14404 1042 aa17.66■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Washc4Q3UMB9 1173 aa17.66■□□□□ 0.42
Ercc1-201ENSMUST00000003645 SfswapQ3USH5 945 aaKnown RBP17.66■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Cyp24a1Q64441 514 aa17.66■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Ddx31Q6NZQ2 687 aaKnown RBP17.66■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Trim56Q80VI1 734 aaKnown RBP17.66■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Lmod1Q8BVA4 595 aa17.66■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Lmbrd2Q8C561 694 aa17.66■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Mboat7Q8CHK3 473 aa17.66■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Pla2g12bQ99P27 195 aa17.66■□□□□ 0.42
Ercc1-201ENSMUST00000003645 1700018B08RikQ9DA83 213 aa17.66■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Mlh1Q9JK91 760 aa17.66■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Rbm6S4R1W5 1118 aaKnown RBP17.66■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Rad50P70388 1312 aa17.65■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Adam7O35227 789 aa17.65■□□□□ 0.42
Ercc1-201ENSMUST00000003645 AsnsQ61024 561 aa17.65■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Ifit2Q64112 472 aa17.65■□□□□ 0.42
Ercc1-201ENSMUST00000003645 GorabQ8BRM2 368 aa17.65■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Gjd4Q8BSD4 364 aa17.65■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Tor1aip2Q8BYU6 502 aa17.65■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Chd5A2A8L1 1946 aa17.65■□□□□ 0.42
Ercc1-201ENSMUST00000003645 Psme4Q5SSW2 1843 aa17.64■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Myh7Q91Z83 1935 aa17.64■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Ifi207E9Q3L4 978 aa17.64■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Hap1O35668 628 aa17.64■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Ms4a2P20490 235 aa17.64■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Hspd1P63038 573 aaKnown RBP17.64■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Zc3h15Q3TIV5 426 aaKnown RBP17.64■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Esyt2Q3TZZ7 845 aa17.64■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Adam1bQ8R534 806 aa17.64■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Sgip1Q8VD37 806 aa17.64■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Epb41l3Q9WV92 929 aa17.64■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Adgra3Q7TT36 1310 aa17.63■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Cdcp1Q5U462 833 aa17.63■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Mxd3Q80US8 206 aa17.63■□□□□ 0.41
Ercc1-201ENSMUST00000003645 AidaQ8C4Q6 305 aa17.63■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Jag1Q9QXX0 1218 aa17.63■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Add2Q9QYB8 725 aa17.63■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Myh13B1AR69 1938 aa17.62■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Psmd14O35593 310 aa17.62■□□□□ 0.41
Ercc1-201ENSMUST00000003645 CfhP06909 1234 aa17.62■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Gas1Q01721 343 aa17.62■□□□□ 0.41
Ercc1-201ENSMUST00000003645 RubcnlQ3TD16 648 aa17.62■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Gm2163Q6PCY5 473 aa17.62■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Alx1Q8C8B0 326 aa17.62■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Pcdhb5Q91XZ5 792 aa17.62■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Ak2Q9WTP6 239 aa17.62■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Scn9aQ62205 1984 aa17.61■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Pnpla6Q3TRM4 1355 aa17.61■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Rbm8a2A0A0N4SUH6 174 aa17.61■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Dynll1P63168 89 aa17.61■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Ppp4cP97470 307 aa17.61■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Tmed8Q3UHI4 326 aa17.61■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Tm4sf1Q64302 202 aa17.61■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Pold4Q9CWP8 107 aa17.61■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Rbm8aQ9CWZ3 174 aa17.61■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Pik3ap1Q9EQ32 811 aa17.61■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Tfip11Q9ERA6 838 aaKnown RBP17.61■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Ripk4Q9ERK0 786 aa17.61■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Aox3G3X982 1335 aa17.6■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Sik3Q6P4S6 1311 aa17.6■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Lrrfip2Q91WK0 415 aa17.6■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms