RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 FHL3Q13643 280 aa15.47■□□□□ 0.07
RABGGTA-214ENST00000560163 RBM39Q14498 530 aaKnown RBP15.47■□□□□ 0.07
RABGGTA-214ENST00000560163 PNLIPRP3Q17RR3 467 aa15.47■□□□□ 0.07
RABGGTA-214ENST00000560163 SPIN3Q5JUX0 258 aa15.47■□□□□ 0.07
RABGGTA-214ENST00000560163 ZNF322Q6U7Q0 402 aaPredicted RBP15.47■□□□□ 0.07
RABGGTA-214ENST00000560163 TMEM179BQ7Z7N9 219 aa15.47■□□□□ 0.07
RABGGTA-214ENST00000560163 FOXRED2Q8IWF2 684 aa15.47■□□□□ 0.07
RABGGTA-214ENST00000560163 DRAM1Q8N682 238 aa15.47■□□□□ 0.07
RABGGTA-214ENST00000560163 CITED4Q96RK1 184 aa15.47■□□□□ 0.07
RABGGTA-214ENST00000560163 PALMDQ9NP74 551 aa15.47■□□□□ 0.07
RABGGTA-214ENST00000560163 SORL1Q92673 2214 aa15.46■□□□□ 0.07
RABGGTA-214ENST00000560163 SIRPB1O00241 398 aa15.46■□□□□ 0.07
RABGGTA-214ENST00000560163 CCRL2O00421 344 aa15.46■□□□□ 0.07
RABGGTA-214ENST00000560163 OR2H2O95918 312 aa15.46■□□□□ 0.07
RABGGTA-214ENST00000560163 CGB3P0DN86 165 aa15.46■□□□□ 0.07
RABGGTA-214ENST00000560163 CGB7P0DN87 165 aa15.46■□□□□ 0.07
RABGGTA-214ENST00000560163 TMEM11P17152 192 aa15.46■□□□□ 0.07
RABGGTA-214ENST00000560163 CXCR4P61073 352 aa15.46■□□□□ 0.07
RABGGTA-214ENST00000560163 DIAPH2-AS1Q14236 149 aa15.46■□□□□ 0.07
RABGGTA-214ENST00000560163 HNF4GQ14541 408 aa15.46■□□□□ 0.07
RABGGTA-214ENST00000560163 ZNF260Q3ZCT1 412 aa15.46■□□□□ 0.07
RABGGTA-214ENST00000560163 TMEM236Q5W0B7 351 aa15.46■□□□□ 0.07
RABGGTA-214ENST00000560163 OR4D6Q8NGJ1 314 aa15.46■□□□□ 0.07
RABGGTA-214ENST00000560163 OR9G1Q8NH87 305 aa15.46■□□□□ 0.07
RABGGTA-214ENST00000560163 TOMM40LQ969M1 308 aa15.46■□□□□ 0.07
RABGGTA-214ENST00000560163 RPEQ96AT9 228 aa15.46■□□□□ 0.07
RABGGTA-214ENST00000560163 CHST5Q9GZS9 411 aa15.46■□□□□ 0.07
RABGGTA-214ENST00000560163 MRM2Q9UI43 246 aaKnown RBP15.46■□□□□ 0.07
RABGGTA-214ENST00000560163 ODAMA1E959 279 aa15.45■□□□□ 0.06
RABGGTA-214ENST00000560163 FUOMA2VDF0 154 aa15.45■□□□□ 0.06
RABGGTA-214ENST00000560163 PRKACAP17612 351 aa15.45■□□□□ 0.06
RABGGTA-214ENST00000560163 PTGFRP43088 359 aa15.45■□□□□ 0.06
RABGGTA-214ENST00000560163 FOXE3Q13461 319 aa15.45■□□□□ 0.06
RABGGTA-214ENST00000560163 EBI3Q14213 229 aa15.45■□□□□ 0.06
RABGGTA-214ENST00000560163 BORCS8Q96FH0 119 aa15.45■□□□□ 0.06
RABGGTA-214ENST00000560163 COQ2Q96H96 371 aa15.45■□□□□ 0.06
RABGGTA-214ENST00000560163 SLC25A19Q9HC21 320 aa15.45■□□□□ 0.06
RABGGTA-214ENST00000560163 HMG20AQ9NP66 347 aa15.45■□□□□ 0.06
RABGGTA-214ENST00000560163 SIRT4Q9Y6E7 314 aaPredicted RBP15.45■□□□□ 0.06
RABGGTA-214ENST00000560163 ZNF729A6NN14 1252 aaPredicted RBP15.44■□□□□ 0.06
RABGGTA-214ENST00000560163 J3QR06 171 aa15.44■□□□□ 0.06
RABGGTA-214ENST00000560163 AP4M1O00189 453 aa15.44■□□□□ 0.06
RABGGTA-214ENST00000560163 SH2D1BO14796 132 aa15.44■□□□□ 0.06
RABGGTA-214ENST00000560163 GATBO75879 557 aaKnown RBP15.44■□□□□ 0.06
RABGGTA-214ENST00000560163 CSN2P05814 226 aa15.44■□□□□ 0.06
RABGGTA-214ENST00000560163 INSL3P51460 131 aa15.44■□□□□ 0.06
RABGGTA-214ENST00000560163 SNU13P55769 128 aaKnown RBP15.44■□□□□ 0.06
RABGGTA-214ENST00000560163 ACTR3P61158 418 aa15.44■□□□□ 0.06
RABGGTA-214ENST00000560163 TRIM25Q14258 630 aaKnown RBP15.44■□□□□ 0.06
RABGGTA-214ENST00000560163 HES1Q14469 280 aa15.44■□□□□ 0.06
RABGGTA-214ENST00000560163 ZFAND6Q6FIF0 208 aa15.44■□□□□ 0.06
RABGGTA-214ENST00000560163 DNAAF1Q8NEP3 725 aa15.44■□□□□ 0.06
RABGGTA-214ENST00000560163 ASB9Q96DX5 294 aa15.44■□□□□ 0.06
RABGGTA-214ENST00000560163 KIRREL1Q96J84 757 aa15.44■□□□□ 0.06
RABGGTA-214ENST00000560163 PLEKHA1Q9HB21 404 aa15.44■□□□□ 0.06
RABGGTA-214ENST00000560163 ANKRD65E5RJM6 399 aa15.43■□□□□ 0.06
RABGGTA-214ENST00000560163 IGKV1D-33P01593 117 aa15.43■□□□□ 0.06
RABGGTA-214ENST00000560163 IGKV1-33P01594 117 aa15.43■□□□□ 0.06
RABGGTA-214ENST00000560163 ELANEP08246 267 aa15.43■□□□□ 0.06
RABGGTA-214ENST00000560163 GPR12P47775 334 aa15.43■□□□□ 0.06
RABGGTA-214ENST00000560163 RBP2P50120 134 aa15.43■□□□□ 0.06
RABGGTA-214ENST00000560163 CFHR3Q02985 330 aa15.43■□□□□ 0.06
RABGGTA-214ENST00000560163 GPR50Q13585 617 aa15.43■□□□□ 0.06
RABGGTA-214ENST00000560163 ODF4Q2M2E3 257 aa15.43■□□□□ 0.06
RABGGTA-214ENST00000560163 FAM98BQ52LJ0 330 aaKnown RBP15.43■□□□□ 0.06
RABGGTA-214ENST00000560163 CXorf66Q5JRM2 361 aaPredicted RBP15.43■□□□□ 0.06
RABGGTA-214ENST00000560163 OVCH2Q7RTZ1 564 aa15.43■□□□□ 0.06
RABGGTA-214ENST00000560163 CATSPERDQ86XM0 798 aa15.43■□□□□ 0.06
RABGGTA-214ENST00000560163 CNN2Q99439 309 aaKnown RBP15.43■□□□□ 0.06
RABGGTA-214ENST00000560163 ABCG5Q9H222 651 aa15.43■□□□□ 0.06
RABGGTA-214ENST00000560163 EXOSC4Q9NPD3 245 aaKnown RBP15.43■□□□□ 0.06
RABGGTA-214ENST00000560163 POMPQ9Y244 141 aa15.43■□□□□ 0.06
RABGGTA-214ENST00000560163 AMMECR1Q9Y4X0 333 aaPredicted RBP15.43■□□□□ 0.06
RABGGTA-214ENST00000560163 IGKV1-9A0A0C4DH69 117 aa15.42■□□□□ 0.06
RABGGTA-214ENST00000560163 KBTBD11-OT1A0A1B0GTJ5 212 aa15.42■□□□□ 0.06
RABGGTA-214ENST00000560163 H3BSH0 61 aa15.42■□□□□ 0.06
RABGGTA-214ENST00000560163 SYT7O43581 403 aa15.42■□□□□ 0.06
RABGGTA-214ENST00000560163 CIB2O75838 187 aa15.42■□□□□ 0.06
RABGGTA-214ENST00000560163 FRMD6-AS1P0C7T7 363 aa15.42■□□□□ 0.06
RABGGTA-214ENST00000560163 NFYBP25208 207 aa15.42■□□□□ 0.06
RABGGTA-214ENST00000560163 MS4A2Q01362 244 aa15.42■□□□□ 0.06
RABGGTA-214ENST00000560163 OR8H3Q8N146 312 aa15.42■□□□□ 0.06
RABGGTA-214ENST00000560163 C4orf3Q8WVX3 66 aa15.42■□□□□ 0.06
RABGGTA-214ENST00000560163 HRASLS5Q96KN8 279 aa15.42■□□□□ 0.06
RABGGTA-214ENST00000560163 MNTQ99583 582 aa15.42■□□□□ 0.06
RABGGTA-214ENST00000560163 GON7Q9BXV9 100 aa15.42■□□□□ 0.06
RABGGTA-214ENST00000560163 COMMD4Q9H0A8 199 aa15.42■□□□□ 0.06
RABGGTA-214ENST00000560163 LINC00574Q9H8X3 128 aa15.42■□□□□ 0.06
RABGGTA-214ENST00000560163 ADGRL4Q9HBW9 690 aa15.42■□□□□ 0.06
RABGGTA-214ENST00000560163 TVP23BQ9NYZ1 205 aa15.42■□□□□ 0.06
RABGGTA-214ENST00000560163 NKX1-2Q9UD57 310 aaPredicted RBP15.42■□□□□ 0.06
RABGGTA-214ENST00000560163 GSTK1Q9Y2Q3 226 aa15.42■□□□□ 0.06
RABGGTA-214ENST00000560163 IGKV1-12A0A0C4DH73 117 aa15.41■□□□□ 0.06
RABGGTA-214ENST00000560163 LY86O95711 162 aa15.41■□□□□ 0.06
RABGGTA-214ENST00000560163 SERPINA3P01011 423 aa15.41■□□□□ 0.06
RABGGTA-214ENST00000560163 CST1P01037 141 aa15.41■□□□□ 0.06
RABGGTA-214ENST00000560163 IGKV1D-12P01611 117 aa15.41■□□□□ 0.06
RABGGTA-214ENST00000560163 RAP2AP10114 183 aa15.41■□□□□ 0.06
RABGGTA-214ENST00000560163 RAB7AP51149 207 aa15.41■□□□□ 0.06
RABGGTA-214ENST00000560163 ATP1B3P54709 279 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms