RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 BARHL1Q9BZE3 327 aa10.51□□□□□ -0.73
SYNE2-219ENST00000555323 SPACA1Q9HBV2 294 aa10.51□□□□□ -0.73
SYNE2-219ENST00000555323 CR1P17927 2039 aa10.51□□□□□ -0.73
SYNE2-219ENST00000555323 A0A0B4J203 849 aa10.5□□□□□ -0.73
SYNE2-219ENST00000555323 TRAV20A0A0B4J274 112 aa10.5□□□□□ -0.73
SYNE2-219ENST00000555323 KIR2DS1A0A191URI9 304 aa10.5□□□□□ -0.73
SYNE2-219ENST00000555323 DPPA5A6NC42 116 aa10.5□□□□□ -0.73
SYNE2-219ENST00000555323 FOXI3A8MTJ6 420 aaPredicted RBP10.5□□□□□ -0.73
SYNE2-219ENST00000555323 H3BMQ9 156 aa10.5□□□□□ -0.73
SYNE2-219ENST00000555323 MGST3O14880 152 aa10.5□□□□□ -0.73
SYNE2-219ENST00000555323 OR7C1O76099 320 aaPredicted RBP10.5□□□□□ -0.73
SYNE2-219ENST00000555323 LIPFP07098 398 aa10.5□□□□□ -0.73
SYNE2-219ENST00000555323 FUT3P21217 361 aa10.5□□□□□ -0.73
SYNE2-219ENST00000555323 OR3A1P47881 315 aa10.5□□□□□ -0.73
SYNE2-219ENST00000555323 KCNJ3P48549 501 aa10.5□□□□□ -0.73
SYNE2-219ENST00000555323 DVL1P1P54792 670 aaPredicted RBP10.5□□□□□ -0.73
SYNE2-219ENST00000555323 SPCS2Q15005 226 aa10.5□□□□□ -0.73
SYNE2-219ENST00000555323 BTN2A1Q7KYR7 527 aa10.5□□□□□ -0.73
SYNE2-219ENST00000555323 FGFRL1Q8N441 504 aa10.5□□□□□ -0.73
SYNE2-219ENST00000555323 TMEM185AQ8NFB2 350 aa10.5□□□□□ -0.73
SYNE2-219ENST00000555323 OR4S1Q8NGB4 309 aa10.5□□□□□ -0.73
SYNE2-219ENST00000555323 RAB40AQ8WXH6 277 aa10.5□□□□□ -0.73
SYNE2-219ENST00000555323 DCTN5Q9BTE1 182 aa10.5□□□□□ -0.73
SYNE2-219ENST00000555323 KCNK15Q9H427 330 aa10.5□□□□□ -0.73
SYNE2-219ENST00000555323 NCOR1P1Q9H4R4 102 aa10.5□□□□□ -0.73
SYNE2-219ENST00000555323 ZNF581Q9P0T4 197 aa10.5□□□□□ -0.73
SYNE2-219ENST00000555323 RSL24D1Q9UHA3 163 aaKnown RBP10.5□□□□□ -0.73
SYNE2-219ENST00000555323 SPATA2Q9UM82 520 aa10.5□□□□□ -0.73
SYNE2-219ENST00000555323 ETV7Q9Y603 341 aa10.5□□□□□ -0.73
SYNE2-219ENST00000555323 LOC105371242A0A075B767 164 aa10.49□□□□□ -0.73
SYNE2-219ENST00000555323 TRBV23-1A0A0A0MS06 115 aa10.49□□□□□ -0.73
SYNE2-219ENST00000555323 A0A0A6YYD4 124 aa10.49□□□□□ -0.73
SYNE2-219ENST00000555323 C22orf46C9J442 243 aa10.49□□□□□ -0.73
SYNE2-219ENST00000555323 SIRPB1O00241 398 aa10.49□□□□□ -0.73
SYNE2-219ENST00000555323 CD5LO43866 347 aa10.49□□□□□ -0.73
SYNE2-219ENST00000555323 NOL3O60936 208 aaKnown RBP10.49□□□□□ -0.73
SYNE2-219ENST00000555323 PAHP00439 452 aa10.49□□□□□ -0.73
SYNE2-219ENST00000555323 TGFAP01135 160 aa10.49□□□□□ -0.73
SYNE2-219ENST00000555323 SNRPBP14678 240 aaKnown RBP10.49□□□□□ -0.73
SYNE2-219ENST00000555323 ZNF182P17025 639 aaPredicted RBP10.49□□□□□ -0.73
SYNE2-219ENST00000555323 GATA3P23771 443 aa10.49□□□□□ -0.73
SYNE2-219ENST00000555323 EFNB2P52799 333 aa10.49□□□□□ -0.73
SYNE2-219ENST00000555323 TMEM50BP56557 158 aa10.49□□□□□ -0.73
SYNE2-219ENST00000555323 LCN2P80188 198 aa10.49□□□□□ -0.73
SYNE2-219ENST00000555323 SCN1BQ07699 218 aa10.49□□□□□ -0.73
SYNE2-219ENST00000555323 PLA2G7Q13093 441 aa10.49□□□□□ -0.73
SYNE2-219ENST00000555323 BIVMQ86UB2 503 aa10.49□□□□□ -0.73
SYNE2-219ENST00000555323 ASCC1Q8N9N2 400 aaKnown RBP10.49□□□□□ -0.73
SYNE2-219ENST00000555323 SUMF2Q8NBJ7 301 aa10.49□□□□□ -0.73
SYNE2-219ENST00000555323 DYNC2LI1Q8TCX1 351 aa10.49□□□□□ -0.73
SYNE2-219ENST00000555323 ACOT12Q8WYK0 555 aa10.49□□□□□ -0.73
SYNE2-219ENST00000555323 ST8SIA4Q92187 359 aa10.49□□□□□ -0.73
SYNE2-219ENST00000555323 TMEM186Q96B77 213 aa10.49□□□□□ -0.73
SYNE2-219ENST00000555323 DGCR14Q96DF8 476 aaKnown RBP10.49□□□□□ -0.73
SYNE2-219ENST00000555323 CMTM3Q96MX0 182 aa10.49□□□□□ -0.73
SYNE2-219ENST00000555323 NICN1Q9BSH3 213 aa10.49□□□□□ -0.73
SYNE2-219ENST00000555323 DPCDQ9BVM2 203 aaPredicted RBP10.49□□□□□ -0.73
SYNE2-219ENST00000555323 MMP26Q9NRE1 261 aa10.49□□□□□ -0.73
SYNE2-219ENST00000555323 RPUSD1Q9UJJ7 312 aaKnown RBP10.49□□□□□ -0.73
SYNE2-219ENST00000555323 HSF4Q9ULV5 492 aa10.49□□□□□ -0.73
SYNE2-219ENST00000555323 INSIG2Q9Y5U4 225 aa10.49□□□□□ -0.73
SYNE2-219ENST00000555323 MAP1AP78559 2803 aaPredicted RBP10.49□□□□□ -0.73
SYNE2-219ENST00000555323 IGHV2-70DA0A0C4DH43 119 aa10.48□□□□□ -0.73
SYNE2-219ENST00000555323 METTL21EPA6NDL7 271 aa10.48□□□□□ -0.73
SYNE2-219ENST00000555323 RAB27BO00194 218 aa10.48□□□□□ -0.73
SYNE2-219ENST00000555323 PDCD6O75340 191 aa10.48□□□□□ -0.73
SYNE2-219ENST00000555323 NDUFB7P17568 137 aa10.48□□□□□ -0.73
SYNE2-219ENST00000555323 GABRR1P24046 479 aa10.48□□□□□ -0.73
SYNE2-219ENST00000555323 CHATP28329 748 aa10.48□□□□□ -0.73
SYNE2-219ENST00000555323 PAX8Q06710 450 aa10.48□□□□□ -0.73
SYNE2-219ENST00000555323 RBM39Q14498 530 aaKnown RBP10.48□□□□□ -0.73
SYNE2-219ENST00000555323 GRK1Q15835 563 aa10.48□□□□□ -0.73
SYNE2-219ENST00000555323 RAB12Q6IQ22 244 aa10.48□□□□□ -0.73
SYNE2-219ENST00000555323 GDPD3Q7L5L3 318 aa10.48□□□□□ -0.73
SYNE2-219ENST00000555323 GAPTQ8N292 157 aa10.48□□□□□ -0.73
SYNE2-219ENST00000555323 OR5H6Q8NGV6 325 aa10.48□□□□□ -0.73
SYNE2-219ENST00000555323 LGALS14Q8TCE9 139 aa10.48□□□□□ -0.73
SYNE2-219ENST00000555323 NUDT16L1Q9BRJ7 211 aaKnown RBP10.48□□□□□ -0.73
SYNE2-219ENST00000555323 CHST6Q9GZX3 395 aa10.48□□□□□ -0.73
SYNE2-219ENST00000555323 HIF1ANQ9NWT6 349 aa10.48□□□□□ -0.73
SYNE2-219ENST00000555323 PEX16Q9Y5Y5 336 aa10.48□□□□□ -0.73
SYNE2-219ENST00000555323 DOCK11Q5JSL3 2073 aa10.48□□□□□ -0.73
SYNE2-219ENST00000555323 ABCA1O95477 2261 aa10.47□□□□□ -0.73
SYNE2-219ENST00000555323 FUOMA2VDF0 154 aa10.47□□□□□ -0.73
SYNE2-219ENST00000555323 MCRIP1C9JLW8 97 aa10.47□□□□□ -0.73
SYNE2-219ENST00000555323 SOCS1O15524 211 aa10.47□□□□□ -0.73
SYNE2-219ENST00000555323 ENSAO43768 121 aaKnown RBP10.47□□□□□ -0.73
SYNE2-219ENST00000555323 CA11O75493 328 aa10.47□□□□□ -0.73
SYNE2-219ENST00000555323 BLVRBP30043 206 aaPredicted RBP10.47□□□□□ -0.73
SYNE2-219ENST00000555323 VEGFCP49767 419 aa10.47□□□□□ -0.73
SYNE2-219ENST00000555323 MEF2CQ06413 473 aaPredicted RBP10.47□□□□□ -0.73
SYNE2-219ENST00000555323 CR1LQ2VPA4 569 aa10.47□□□□□ -0.73
SYNE2-219ENST00000555323 PAN3Q58A45 887 aaKnown RBP10.47□□□□□ -0.73
SYNE2-219ENST00000555323 ATAD3CQ5T2N8 411 aa10.47□□□□□ -0.73
SYNE2-219ENST00000555323 SLC35E4Q6ICL7 350 aa10.47□□□□□ -0.73
SYNE2-219ENST00000555323 METAP1DQ6UB28 335 aaPredicted RBP10.47□□□□□ -0.73
SYNE2-219ENST00000555323 C1orf122Q6ZSJ8 110 aa10.47□□□□□ -0.73
SYNE2-219ENST00000555323 GLCCI1Q86VQ1 547 aa10.47□□□□□ -0.73
SYNE2-219ENST00000555323 BPIFB2Q8N4F0 458 aa10.47□□□□□ -0.73
SYNE2-219ENST00000555323 OR56B1Q8NGI3 324 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms