RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 LMO1P25800 156 aa14.09□□□□□ -0.15
SHROOM1-205ENST00000488072 HTR2CP28335 458 aa14.09□□□□□ -0.15
SHROOM1-205ENST00000488072 QRFPP83859 136 aa14.09□□□□□ -0.15
SHROOM1-205ENST00000488072 UNC119Q13432 240 aa14.09□□□□□ -0.15
SHROOM1-205ENST00000488072 SIGIRRQ6IA17 410 aa14.09□□□□□ -0.15
SHROOM1-205ENST00000488072 FIP1L1Q6UN15 594 aaKnown RBP14.09□□□□□ -0.15
SHROOM1-205ENST00000488072 CDH26Q8IXH8 852 aa14.09□□□□□ -0.15
SHROOM1-205ENST00000488072 OR8H2Q8N162 312 aa14.09□□□□□ -0.15
SHROOM1-205ENST00000488072 C11orf42Q8N5U0 333 aa14.09□□□□□ -0.15
SHROOM1-205ENST00000488072 C8orf46Q8TAG6 207 aa14.09□□□□□ -0.15
SHROOM1-205ENST00000488072 CPNE2Q96FN4 548 aaPredicted RBP14.09□□□□□ -0.15
SHROOM1-205ENST00000488072 WDFY2Q96P53 400 aa14.09□□□□□ -0.15
SHROOM1-205ENST00000488072 S100A13Q99584 98 aa14.09□□□□□ -0.15
SHROOM1-205ENST00000488072 UQCC2Q9BRT2 126 aa14.09□□□□□ -0.15
SHROOM1-205ENST00000488072 NICN1Q9BSH3 213 aa14.09□□□□□ -0.15
SHROOM1-205ENST00000488072 MRI1Q9BV20 369 aa14.09□□□□□ -0.15
SHROOM1-205ENST00000488072 NAA50Q9GZZ1 169 aaKnown RBP14.09□□□□□ -0.15
SHROOM1-205ENST00000488072 SLITRK2Q9H156 845 aa14.09□□□□□ -0.15
SHROOM1-205ENST00000488072 DOCK11Q5JSL3 2073 aa14.08□□□□□ -0.15
SHROOM1-205ENST00000488072 TRAV40A0A0B4J280 105 aa14.08□□□□□ -0.16
SHROOM1-205ENST00000488072 TOX4O94842 621 aa14.08□□□□□ -0.16
SHROOM1-205ENST00000488072 ECDO95905 644 aaPredicted RBP14.08□□□□□ -0.16
SHROOM1-205ENST00000488072 MGMTP16455 207 aa14.08□□□□□ -0.16
SHROOM1-205ENST00000488072 SRD5A1P18405 259 aa14.08□□□□□ -0.16
SHROOM1-205ENST00000488072 DLX6P56179 175 aa14.08□□□□□ -0.16
SHROOM1-205ENST00000488072 RPL31P62899 125 aaKnown RBP14.08□□□□□ -0.16
SHROOM1-205ENST00000488072 MXD1Q05195 221 aa14.08□□□□□ -0.16
SHROOM1-205ENST00000488072 UTF1Q5T230 341 aa14.08□□□□□ -0.16
SHROOM1-205ENST00000488072 METTL11BQ5VVY1 283 aa14.08□□□□□ -0.16
SHROOM1-205ENST00000488072 BAIAP2L2Q6UXY1 529 aa14.08□□□□□ -0.16
SHROOM1-205ENST00000488072 BRD3OSQ6XYD6 125 aa14.08□□□□□ -0.16
SHROOM1-205ENST00000488072 VMO1Q7Z5L0 202 aa14.08□□□□□ -0.16
SHROOM1-205ENST00000488072 C5orf24Q7Z6I8 188 aa14.08□□□□□ -0.16
SHROOM1-205ENST00000488072 SUMF2Q8NBJ7 301 aa14.08□□□□□ -0.16
SHROOM1-205ENST00000488072 OR51D1Q8NGF3 324 aa14.08□□□□□ -0.16
SHROOM1-205ENST00000488072 UPRTQ96BW1 309 aa14.08□□□□□ -0.16
SHROOM1-205ENST00000488072 PLGRKTQ9HBL7 147 aa14.08□□□□□ -0.16
SHROOM1-205ENST00000488072 ZNF69Q9UC07 566 aa14.08□□□□□ -0.16
SHROOM1-205ENST00000488072 CDC42EP3Q9UKI2 254 aa14.08□□□□□ -0.16
SHROOM1-205ENST00000488072 SSR3Q9UNL2 185 aa14.08□□□□□ -0.16
SHROOM1-205ENST00000488072 V9GY05 133 aa14.08□□□□□ -0.16
SHROOM1-205ENST00000488072 NAV3Q8IVL0 2385 aa14.08□□□□□ -0.16
SHROOM1-205ENST00000488072 TRAV1-2A0A0B4J238 106 aa14.07□□□□□ -0.16
SHROOM1-205ENST00000488072 MDFIC2A0A1B0GVS7 189 aa14.07□□□□□ -0.16
SHROOM1-205ENST00000488072 SLC17A2O00624 439 aa14.07□□□□□ -0.16
SHROOM1-205ENST00000488072 MMP23AO75900 390 aa14.07□□□□□ -0.16
SHROOM1-205ENST00000488072 OR7C1O76099 320 aaPredicted RBP14.07□□□□□ -0.16
SHROOM1-205ENST00000488072 LIPFP07098 398 aa14.07□□□□□ -0.16
SHROOM1-205ENST00000488072 GATA3P23771 443 aa14.07□□□□□ -0.16
SHROOM1-205ENST00000488072 FGF9P31371 208 aaPredicted RBP14.07□□□□□ -0.16
SHROOM1-205ENST00000488072 SDC2P34741 201 aa14.07□□□□□ -0.16
SHROOM1-205ENST00000488072 EFNB2P52799 333 aa14.07□□□□□ -0.16
SHROOM1-205ENST00000488072 IL13RA2Q14627 380 aa14.07□□□□□ -0.16
SHROOM1-205ENST00000488072 RAB11BQ15907 218 aa14.07□□□□□ -0.16
SHROOM1-205ENST00000488072 PAN3Q58A45 887 aaKnown RBP14.07□□□□□ -0.16
SHROOM1-205ENST00000488072 ATAD3CQ5T2N8 411 aa14.07□□□□□ -0.16
SHROOM1-205ENST00000488072 GDPD3Q7L5L3 318 aa14.07□□□□□ -0.16
SHROOM1-205ENST00000488072 OR6M1Q8NGM8 313 aa14.07□□□□□ -0.16
SHROOM1-205ENST00000488072 LHX4Q969G2 390 aa14.07□□□□□ -0.16
SHROOM1-205ENST00000488072 POM121Q96HA1 1249 aa14.07□□□□□ -0.16
SHROOM1-205ENST00000488072 Q96M66 194 aa14.07□□□□□ -0.16
SHROOM1-205ENST00000488072 FAM234AQ9H0X4 552 aa14.07□□□□□ -0.16
SHROOM1-205ENST00000488072 SEBOXQ9HB31 216 aaPredicted RBP14.07□□□□□ -0.16
SHROOM1-205ENST00000488072 NIPBLQ6KC79 2804 aaeCLIP14.06□□□□□ -0.16
SHROOM1-205ENST00000488072 CENPVL3A0A0U1RRI6 287 aa14.06□□□□□ -0.16
SHROOM1-205ENST00000488072 TFAP2AP05549 437 aa14.06□□□□□ -0.16
SHROOM1-205ENST00000488072 GTF2F2P13984 249 aa14.06□□□□□ -0.16
SHROOM1-205ENST00000488072 MYL9P24844 172 aa14.06□□□□□ -0.16
SHROOM1-205ENST00000488072 GDNFP39905 211 aa14.06□□□□□ -0.16
SHROOM1-205ENST00000488072 C2orf76Q3KRA6 126 aa14.06□□□□□ -0.16
SHROOM1-205ENST00000488072 HCP5Q6MZN7 132 aa14.06□□□□□ -0.16
SHROOM1-205ENST00000488072 ZNF782Q6ZMW2 699 aaPredicted RBP14.06□□□□□ -0.16
SHROOM1-205ENST00000488072 TNFRSF14Q92956 283 aa14.06□□□□□ -0.16
SHROOM1-205ENST00000488072 FOXRED1Q96CU9 486 aaPredicted RBP14.06□□□□□ -0.16
SHROOM1-205ENST00000488072 DPCDQ9BVM2 203 aaPredicted RBP14.06□□□□□ -0.16
SHROOM1-205ENST00000488072 RHOFQ9HBH0 211 aa14.06□□□□□ -0.16
SHROOM1-205ENST00000488072 GLS2Q9UI32 602 aa14.06□□□□□ -0.16
SHROOM1-205ENST00000488072 TRBV23-1A0A0A0MS06 115 aa14.05□□□□□ -0.16
SHROOM1-205ENST00000488072 TMEM14DPA8MWL7 114 aa14.05□□□□□ -0.16
SHROOM1-205ENST00000488072 RNASEK-C17orf49H0YIS7 233 aa14.05□□□□□ -0.16
SHROOM1-205ENST00000488072 MGST3O14880 152 aa14.05□□□□□ -0.16
SHROOM1-205ENST00000488072 GPR37O15354 613 aa14.05□□□□□ -0.16
SHROOM1-205ENST00000488072 FAM157CP0CG43 387 aa14.05□□□□□ -0.16
SHROOM1-205ENST00000488072 RAB3BP20337 219 aa14.05□□□□□ -0.16
SHROOM1-205ENST00000488072 HNF1AP20823 631 aa14.05□□□□□ -0.16
SHROOM1-205ENST00000488072 PAX6P26367 422 aa14.05□□□□□ -0.16
SHROOM1-205ENST00000488072 P2RX3P56373 397 aa14.05□□□□□ -0.16
SHROOM1-205ENST00000488072 NHLRC3Q5JS37 347 aa14.05□□□□□ -0.16
SHROOM1-205ENST00000488072 OR13F1Q8NGS4 319 aa14.05□□□□□ -0.16
SHROOM1-205ENST00000488072 UBALD1Q8TB05 177 aa14.05□□□□□ -0.16
SHROOM1-205ENST00000488072 NANPQ8TBE9 248 aa14.05□□□□□ -0.16
SHROOM1-205ENST00000488072 FAM3DQ96BQ1 224 aa14.05□□□□□ -0.16
SHROOM1-205ENST00000488072 ZNF48Q96MX3 618 aaPredicted RBP14.05□□□□□ -0.16
SHROOM1-205ENST00000488072 SLC6A7Q99884 636 aa14.05□□□□□ -0.16
SHROOM1-205ENST00000488072 FUNDC2Q9BWH2 189 aa14.05□□□□□ -0.16
SHROOM1-205ENST00000488072 LPAR5Q9H1C0 372 aa14.05□□□□□ -0.16
SHROOM1-205ENST00000488072 LPAR3Q9UBY5 353 aa14.05□□□□□ -0.16
SHROOM1-205ENST00000488072 KIF25Q9UIL4 384 aa14.05□□□□□ -0.16
SHROOM1-205ENST00000488072 JMJD1CQ15652 2540 aa14.04□□□□□ -0.16
SHROOM1-205ENST00000488072 TMEM272A0A1B0GTI8 110 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms