RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 PRKACBP22694 351 aa10.95□□□□□ -0.66
RPAIN-216ENST00000575599 SOX6P35712 828 aa10.95□□□□□ -0.66
RPAIN-216ENST00000575599 MTNR1BP49286 362 aa10.95□□□□□ -0.66
RPAIN-216ENST00000575599 ATP1B3P54709 279 aa10.95□□□□□ -0.66
RPAIN-216ENST00000575599 MTCP1P56278 107 aa10.95□□□□□ -0.66
RPAIN-216ENST00000575599 ARF6P62330 175 aa10.95□□□□□ -0.66
RPAIN-216ENST00000575599 MXD1Q05195 221 aa10.95□□□□□ -0.66
RPAIN-216ENST00000575599 FAM27D1Q5T7N8 215 aa10.95□□□□□ -0.66
RPAIN-216ENST00000575599 FOXB2Q5VYV0 432 aa10.95□□□□□ -0.66
RPAIN-216ENST00000575599 LHFPL2Q6ZUX7 228 aa10.95□□□□□ -0.66
RPAIN-216ENST00000575599 BCL6BQ8N143 479 aaPredicted RBP10.95□□□□□ -0.66
RPAIN-216ENST00000575599 CD177Q8N6Q3 437 aa10.95□□□□□ -0.66
RPAIN-216ENST00000575599 RFT1Q96AA3 541 aa10.95□□□□□ -0.66
RPAIN-216ENST00000575599 SPSB1Q96BD6 273 aa10.95□□□□□ -0.66
RPAIN-216ENST00000575599 CEP19Q96LK0 163 aa10.95□□□□□ -0.66
RPAIN-216ENST00000575599 WDFY2Q96P53 400 aa10.95□□□□□ -0.66
RPAIN-216ENST00000575599 SUCNR1Q9BXA5 334 aa10.95□□□□□ -0.66
RPAIN-216ENST00000575599 ZCCHC4Q9H5U6 513 aa10.95□□□□□ -0.66
RPAIN-216ENST00000575599 MAB21L2Q9Y586 359 aa10.95□□□□□ -0.66
RPAIN-216ENST00000575599 TRBV5-7A0A0A0MS05 114 aa10.94□□□□□ -0.66
RPAIN-216ENST00000575599 TRAV1-2A0A0B4J238 106 aa10.94□□□□□ -0.66
RPAIN-216ENST00000575599 IL1AP01583 271 aa10.94□□□□□ -0.66
RPAIN-216ENST00000575599 MAS1P04201 325 aa10.94□□□□□ -0.66
RPAIN-216ENST00000575599 SNRPBP14678 240 aaKnown RBP10.94□□□□□ -0.66
RPAIN-216ENST00000575599 RAB3AP20336 220 aa10.94□□□□□ -0.66
RPAIN-216ENST00000575599 PSMD7P51665 324 aa10.94□□□□□ -0.66
RPAIN-216ENST00000575599 SPCS2Q15005 226 aa10.94□□□□□ -0.66
RPAIN-216ENST00000575599 C11orf91Q3C1V1 193 aa10.94□□□□□ -0.66
RPAIN-216ENST00000575599 GPR157Q5UAW9 335 aa10.94□□□□□ -0.66
RPAIN-216ENST00000575599 BRD3OSQ6XYD6 125 aa10.94□□□□□ -0.66
RPAIN-216ENST00000575599 TPRA1Q86W33 373 aa10.94□□□□□ -0.66
RPAIN-216ENST00000575599 DNAAF1Q8NEP3 725 aa10.94□□□□□ -0.66
RPAIN-216ENST00000575599 NDNFQ8TB73 568 aa10.94□□□□□ -0.66
RPAIN-216ENST00000575599 SDSLQ96GA7 329 aa10.94□□□□□ -0.66
RPAIN-216ENST00000575599 SPACA5Q96QH8 159 aa10.94□□□□□ -0.66
RPAIN-216ENST00000575599 TBX15Q96SF7 602 aa10.94□□□□□ -0.66
RPAIN-216ENST00000575599 DCTN5Q9BTE1 182 aa10.94□□□□□ -0.66
RPAIN-216ENST00000575599 CNTD2Q9H8S5 307 aa10.94□□□□□ -0.66
RPAIN-216ENST00000575599 HES4Q9HCC6 221 aa10.94□□□□□ -0.66
RPAIN-216ENST00000575599 TAS2R4Q9NYW5 299 aa10.94□□□□□ -0.66
RPAIN-216ENST00000575599 MTCH1Q9NZJ7 389 aa10.94□□□□□ -0.66
RPAIN-216ENST00000575599 FOXJ3Q9UPW0 622 aa10.94□□□□□ -0.66
RPAIN-216ENST00000575599 DNHD1Q96M86 4753 aa10.94□□□□□ -0.66
RPAIN-216ENST00000575599 FBN1P35555 2871 aaKnown RBP10.94□□□□□ -0.66
RPAIN-216ENST00000575599 MXRA5Q9NR99 2828 aa10.94□□□□□ -0.66
RPAIN-216ENST00000575599 ATRQ13535 2644 aa10.94□□□□□ -0.66
RPAIN-216ENST00000575599 A0A0A6YYJ9 748 aa10.93□□□□□ -0.66
RPAIN-216ENST00000575599 A0A1W2PQ09 198 aa10.93□□□□□ -0.66
RPAIN-216ENST00000575599 MEGF11A6BM72 1044 aa10.93□□□□□ -0.66
RPAIN-216ENST00000575599 F8VVB4 439 aa10.93□□□□□ -0.66
RPAIN-216ENST00000575599 F8VWA3 439 aa10.93□□□□□ -0.66
RPAIN-216ENST00000575599 SPRY1O43609 319 aaPredicted RBP10.93□□□□□ -0.66
RPAIN-216ENST00000575599 CYB5AP00167 134 aa10.93□□□□□ -0.66
RPAIN-216ENST00000575599 HCKP08631 526 aa10.93□□□□□ -0.66
RPAIN-216ENST00000575599 MMP9P14780 707 aa10.93□□□□□ -0.66
RPAIN-216ENST00000575599 RAB3BP20337 219 aa10.93□□□□□ -0.66
RPAIN-216ENST00000575599 PRDX2P32119 198 aa10.93□□□□□ -0.66
RPAIN-216ENST00000575599 SDC2P34741 201 aa10.93□□□□□ -0.66
RPAIN-216ENST00000575599 TGFBR1P36897 503 aa10.93□□□□□ -0.66
RPAIN-216ENST00000575599 CAV3P56539 151 aa10.93□□□□□ -0.66
RPAIN-216ENST00000575599 HILS1P60008 231 aa10.93□□□□□ -0.66
RPAIN-216ENST00000575599 ERVK11-1P61568 191 aa10.93□□□□□ -0.66
RPAIN-216ENST00000575599 RUSC1-AS1Q66K80 236 aa10.93□□□□□ -0.66
RPAIN-216ENST00000575599 RBMS3Q6XE24 437 aaKnown RBP10.93□□□□□ -0.66
RPAIN-216ENST00000575599 ZNF561Q8N587 486 aa10.93□□□□□ -0.66
RPAIN-216ENST00000575599 PARP16Q8N5Y8 322 aa10.93□□□□□ -0.66
RPAIN-216ENST00000575599 SIGLECL1Q8N7X8 197 aa10.93□□□□□ -0.66
RPAIN-216ENST00000575599 OR5D18Q8NGL1 313 aa10.93□□□□□ -0.66
RPAIN-216ENST00000575599 EMG1Q92979 244 aaKnown RBP10.93□□□□□ -0.66
RPAIN-216ENST00000575599 ORAI1Q96D31 301 aa10.93□□□□□ -0.66
RPAIN-216ENST00000575599 DCUN1D5Q9BTE7 237 aa10.93□□□□□ -0.66
RPAIN-216ENST00000575599 C19orf24Q9BVV8 132 aa10.93□□□□□ -0.66
RPAIN-216ENST00000575599 SIRPDQ9H106 197 aa10.93□□□□□ -0.66
RPAIN-216ENST00000575599 SOX21Q9Y651 276 aaPredicted RBP10.93□□□□□ -0.66
RPAIN-216ENST00000575599 PIN1P1O15428 100 aa10.92□□□□□ -0.66
RPAIN-216ENST00000575599 SULT1B1O43704 296 aa10.92□□□□□ -0.66
RPAIN-216ENST00000575599 ANGPTL7O43827 346 aa10.92□□□□□ -0.66
RPAIN-216ENST00000575599 KNG1P01042 644 aa10.92□□□□□ -0.66
RPAIN-216ENST00000575599 CALCBP10092 127 aa10.92□□□□□ -0.66
RPAIN-216ENST00000575599 FSTP19883 344 aa10.92□□□□□ -0.66
RPAIN-216ENST00000575599 BCL3P20749 454 aa10.92□□□□□ -0.66
RPAIN-216ENST00000575599 BDKRB2P30411 391 aa10.92□□□□□ -0.66
RPAIN-216ENST00000575599 RORCP51449 518 aa10.92□□□□□ -0.66
RPAIN-216ENST00000575599 SNU13P55769 128 aaKnown RBP10.92□□□□□ -0.66
RPAIN-216ENST00000575599 CNPY1Q3B7I2 92 aa10.92□□□□□ -0.66
RPAIN-216ENST00000575599 GLT8D1Q68CQ7 371 aa10.92□□□□□ -0.66
RPAIN-216ENST00000575599 RNF144BQ7Z419 303 aa10.92□□□□□ -0.66
RPAIN-216ENST00000575599 VMO1Q7Z5L0 202 aa10.92□□□□□ -0.66
RPAIN-216ENST00000575599 CROCCP3Q8IVE0 287 aa10.92□□□□□ -0.66
RPAIN-216ENST00000575599 PDZD9Q8IXQ8 264 aa10.92□□□□□ -0.66
RPAIN-216ENST00000575599 MKXQ8IYA7 352 aa10.92□□□□□ -0.66
RPAIN-216ENST00000575599 CMTM4Q8IZR5 234 aa10.92□□□□□ -0.66
RPAIN-216ENST00000575599 FAM185AQ8N0U4 392 aa10.92□□□□□ -0.66
RPAIN-216ENST00000575599 LY6G5BQ8NDX9 201 aa10.92□□□□□ -0.66
RPAIN-216ENST00000575599 LHX4Q969G2 390 aa10.92□□□□□ -0.66
RPAIN-216ENST00000575599 JMJD8Q96S16 334 aa10.92□□□□□ -0.66
RPAIN-216ENST00000575599 PPIL3Q9H2H8 161 aaKnown RBP10.92□□□□□ -0.66
RPAIN-216ENST00000575599 SIRT7Q9NRC8 400 aa10.92□□□□□ -0.66
RPAIN-216ENST00000575599 RBFOX1Q9NWB1 397 aaKnown RBP10.92□□□□□ -0.66
RPAIN-216ENST00000575599 AK6Q9Y3D8 172 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms