RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 GAL3ST1Q99999 423 aa8.21□□□□□ -1.1
CLN8-202ENST00000517514 TM2D1Q9BX74 207 aa8.21□□□□□ -1.1
CLN8-202ENST00000517514 DNTTIP1Q9H147 329 aa8.21□□□□□ -1.1
CLN8-202ENST00000517514 IFT22Q9H7X7 185 aa8.21□□□□□ -1.1
CLN8-202ENST00000517514 DNAJB11Q9UBS4 358 aa8.21□□□□□ -1.1
CLN8-202ENST00000517514 GHRLQ9UBU3 117 aa8.21□□□□□ -1.1
CLN8-202ENST00000517514 OR14J1Q9UGF5 321 aa8.21□□□□□ -1.1
CLN8-202ENST00000517514 ST3GAL6Q9Y274 331 aa8.21□□□□□ -1.1
CLN8-202ENST00000517514 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.2□□□□□ -1.15e-6■□□□□ 9.9
CLN8-202ENST00000517514 SMIM31A0A1B0GVY4 71 aa8.2□□□□□ -1.1
CLN8-202ENST00000517514 ZNF701M0R085 212 aaPredicted RBP8.2□□□□□ -1.1
CLN8-202ENST00000517514 SLC33A1O00400 549 aaPredicted RBP8.2□□□□□ -1.1
CLN8-202ENST00000517514 DVL1O14640 695 aa8.2□□□□□ -1.1
CLN8-202ENST00000517514 PHF1O43189 567 aaPredicted RBP8.2□□□□□ -1.1
CLN8-202ENST00000517514 NDUFA2O43678 99 aa8.2□□□□□ -1.1
CLN8-202ENST00000517514 ZNF780AO75290 641 aaPredicted RBP8.2□□□□□ -1.1
CLN8-202ENST00000517514 CRTAPO75718 401 aaPredicted RBP8.2□□□□□ -1.1
CLN8-202ENST00000517514 GTF2F2P13984 249 aa8.2□□□□□ -1.1
CLN8-202ENST00000517514 GABRA2P47869 451 aa8.2□□□□□ -1.1
CLN8-202ENST00000517514 OR3A1P47881 315 aa8.2□□□□□ -1.1
CLN8-202ENST00000517514 BMXP51813 675 aa8.2□□□□□ -1.1
CLN8-202ENST00000517514 CAPZA1P52907 286 aa8.2□□□□□ -1.1
CLN8-202ENST00000517514 TMEM50BP56557 158 aa8.2□□□□□ -1.1
CLN8-202ENST00000517514 GPR176Q14439 515 aa8.2□□□□□ -1.1
CLN8-202ENST00000517514 MOGAT2Q3SYC2 334 aa8.2□□□□□ -1.1
CLN8-202ENST00000517514 SPIN3Q5JUX0 258 aa8.2□□□□□ -1.1
CLN8-202ENST00000517514 WDR25Q64LD2 544 aaPredicted RBP8.2□□□□□ -1.1
CLN8-202ENST00000517514 SPICQ8N5J4 248 aa8.2□□□□□ -1.1
CLN8-202ENST00000517514 OR4S1Q8NGB4 309 aa8.2□□□□□ -1.1
CLN8-202ENST00000517514 KCNG3Q8TAE7 436 aa8.2□□□□□ -1.1
CLN8-202ENST00000517514 MRPS24Q96EL2 167 aaKnown RBP8.2□□□□□ -1.1
CLN8-202ENST00000517514 NEIL1Q96FI4 390 aaPredicted RBP8.2□□□□□ -1.1
CLN8-202ENST00000517514 COX4I2Q96KJ9 171 aa8.2□□□□□ -1.1
CLN8-202ENST00000517514 SELENOIQ9C0D9 397 aa8.2□□□□□ -1.1
CLN8-202ENST00000517514 RCC2Q9P258 522 aaKnown RBP8.2□□□□□ -1.1
CLN8-202ENST00000517514 MIOXQ9UGB7 285 aa8.2□□□□□ -1.1
CLN8-202ENST00000517514 RSL24D1Q9UHA3 163 aaKnown RBP8.2□□□□□ -1.1
CLN8-202ENST00000517514 A8MXK9 166 aa8.19□□□□□ -1.1
CLN8-202ENST00000517514 C22orf46C9J442 243 aa8.19□□□□□ -1.1
CLN8-202ENST00000517514 K7N7A8 449 aa8.19□□□□□ -1.1
CLN8-202ENST00000517514 RAB27BO00194 218 aa8.19□□□□□ -1.1
CLN8-202ENST00000517514 SIRPB1O00241 398 aa8.19□□□□□ -1.1
CLN8-202ENST00000517514 TMPRSS2O15393 492 aa8.19□□□□□ -1.1
CLN8-202ENST00000517514 SOCS1O15524 211 aa8.19□□□□□ -1.1
CLN8-202ENST00000517514 CSTBP04080 98 aaKnown RBP8.19□□□□□ -1.1
CLN8-202ENST00000517514 CHRM2P08172 466 aa8.19□□□□□ -1.1
CLN8-202ENST00000517514 IGHV4-31P0DP07 118 aa8.19□□□□□ -1.1
CLN8-202ENST00000517514 RPS2P15880 293 aaKnown RBP8.19□□□□□ -1.1
CLN8-202ENST00000517514 ZNF182P17025 639 aaPredicted RBP8.19□□□□□ -1.1
CLN8-202ENST00000517514 RAB6AP20340 208 aa8.19□□□□□ -1.1
CLN8-202ENST00000517514 CHATP28329 748 aa8.19□□□□□ -1.1
CLN8-202ENST00000517514 IKZF1Q13422 519 aa8.19□□□□□ -1.1
CLN8-202ENST00000517514 BRICD5Q6PL45 260 aa8.19□□□□□ -1.1
CLN8-202ENST00000517514 Q6ZPA2 131 aa8.19□□□□□ -1.1
CLN8-202ENST00000517514 TCF23Q7RTU1 214 aa8.19□□□□□ -1.1
CLN8-202ENST00000517514 ZNF561Q8N587 486 aa8.19□□□□□ -1.1
CLN8-202ENST00000517514 PLPPR1Q8TBJ4 325 aa8.19□□□□□ -1.1
CLN8-202ENST00000517514 COQ2Q96H96 371 aa8.19□□□□□ -1.1
CLN8-202ENST00000517514 S100A13Q99584 98 aa8.19□□□□□ -1.1
CLN8-202ENST00000517514 TMUB1Q9BVT8 246 aa8.19□□□□□ -1.1
CLN8-202ENST00000517514 TMEM59Q9BXS4 323 aa8.19□□□□□ -1.1
CLN8-202ENST00000517514 SLIRPQ9GZT3 109 aaKnown RBP8.19□□□□□ -1.1
CLN8-202ENST00000517514 RAB22AQ9UL26 194 aa8.19□□□□□ -1.1
CLN8-202ENST00000517514 SPATA2Q9UM82 520 aa8.19□□□□□ -1.1
CLN8-202ENST00000517514 KCNK7Q9Y2U2 307 aa8.19□□□□□ -1.1
CLN8-202ENST00000517514 SVEP1Q4LDE5 3571 aa8.19□□□□□ -1.1
CLN8-202ENST00000517514 CREBBPQ92793 2442 aa8.19□□□□□ -1.1
CLN8-202ENST00000517514 ABCA1O95477 2261 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 FAM90A10PA6NDY2 464 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 FAM90A18PA6NE21 464 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 FAM90A16PA6NEW6 464 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 FAM90A20PA6NIJ5 464 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 FAM90A8PA6NJQ4 464 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 FAM90A7PA6NKC0 464 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 FAM90A22PA8MWA6 464 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 FAM90A12PA8MX19 464 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 FAM90A5PA8MXJ8 464 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 FAM90A23PA8MXZ1 464 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 SH2D1BO14796 132 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 DEGS1O15121 323 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 TK1P04183 234 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 FAM90A15PP0C7V4 464 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 FAM90A13PP0C7W8 464 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 FAM90A14PP0C7W9 464 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 FAM90A24PP0C7X0 464 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 GABRR1P24046 479 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 PITPNBP48739 271 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 RORCP51449 518 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 SCAND1P57086 179 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 IL13RA1P78552 427 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 SCN1BQ07699 218 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 KCNJ8Q15842 424 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 MPV17LQ2QL34 196 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 TMEM249Q2WGJ8 235 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 PLAC9Q5JTB6 97 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 SLC36A1Q7Z2H8 476 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 LINC00596Q86U02 117 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 CROCCP3Q8IVE0 287 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 BPIFB2Q8N4F0 458 aa8.18□□□□□ -1.1
CLN8-202ENST00000517514 SUMF2Q8NBJ7 301 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms