RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Defb21Q8C5Z4 100 aa19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Myct1Q8R411 188 aa19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Fcrl1Q8R4Y0 343 aa19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Or51e2Q8VBV9 320 aa19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Sfxn3Q91V61 321 aa19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 4930503E14RikQ9D583 177 aa19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Polg2Q9QZM2 459 aa19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Gk2Q9WU65 554 aa19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Ptpn13Q64512 2453 aa19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Gm4858A0A0A6YWS7 318 aa19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Gm42372A0A1B0GT27 204 aa19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Olfr1337A2ACY8 315 aa19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Hacd4A2AKM2 232 aa19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Rgs5O08850 181 aa19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Abcd4O89016 606 aa19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Crisp2P16563 243 aa19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 ActbP60710 375 aa19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Actg1P63260 375 aaKnown RBP19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Zfp729aQ4QQP3 973 aa19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Oas1bQ60856 376 aa19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Vash1Q8C1W1 375 aa19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Naa40Q8VE10 237 aa19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Rtn4rQ99PI8 473 aa19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Cmss1Q9CZT6 276 aaKnown RBP19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Ighv1-76A0A0G2JFE9 117 aa19.69■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Rpl7a-ps5A0A140T8L3 268 aa19.69■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Olfr1328B1ARV2 313 aa19.69■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Olfr424E9Q0Q2 315 aa19.69■□□□□ 0.74
Scn1b-201ENSMUST00000098548 4930579F01RikE9Q3L6 325 aa19.69■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Gm8024L7N2E0 100 aa19.69■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Il1bP10749 269 aa19.69■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Lire1P11260 357 aa19.69■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Atf1P81269 269 aaKnown RBP19.69■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Foxg1Q60987 481 aa19.69■□□□□ 0.74
Scn1b-201ENSMUST00000098548 SrmQ64674 302 aa19.69■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Olfr1477Q7TQQ7 315 aa19.69■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Zfp189Q8BKP2 608 aa19.69■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Yipf6Q8BR70 236 aa19.69■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Pqlc2Q8C4N4 293 aa19.69■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Olfr291Q8VF60 317 aa19.69■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Wasf3Q8VHI6 501 aa19.69■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Exosc8Q9D753 276 aaKnown RBP19.69■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Derl3Q9D8K3 228 aa19.69■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Rbbp9O88851 186 aa19.68■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Igh-3P01867 404 aa19.68■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Zfp27P10077 819 aa19.68■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Igfbp3P47878 292 aa19.68■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Cav3P51637 151 aa19.68■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Mapk3Q63844 380 aa19.68■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Olfr657Q7TRP7 319 aa19.68■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Sh2d7Q8BI17 458 aa19.68■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Lix1lQ8BQ89 337 aa19.68■□□□□ 0.74
Scn1b-201ENSMUST00000098548 FarsaQ8C0C7 508 aa19.68■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Rdh9Q8K5C8 317 aa19.68■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Ubac2Q8R1K1 345 aa19.68■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Zmynd11Q8R5C8 602 aa19.68■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Tmem5Q8VDX6 444 aa19.68■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Olfr1459Q8VFV9 307 aa19.68■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Rtl8bQ9D1F0 113 aa19.68■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Mdp1Q9D967 164 aa19.68■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Yipf5Q9EQQ2 257 aa19.68■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Clec4eQ9R0Q8 214 aa19.68■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Gm34653A0A1L1SR01 368 aa19.67■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Gm7929A0A286YDV3 213 aa19.67■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Gm21977F6U3N7 213 aa19.67■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Gm8247F6VRJ8 213 aa19.67■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Gm8005F6YKY3 213 aa19.67■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Gm3015F6ZAP6 213 aa19.67■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Gm8212F6ZMY5 213 aa19.67■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Gm7954F7BAX1 213 aa19.67■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Gm8138F7BY56 213 aa19.67■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Gm8232F7CFJ3 213 aa19.67■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Gm17079F7D8Y4 213 aa19.67■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Gm8165L7N218 213 aa19.67■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Gm8122L7N2C7 213 aa19.67■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Gm17078M0QW51 211 aa19.67■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Il4P07750 140 aa19.67■□□□□ 0.74
Scn1b-201ENSMUST00000098548 ElnP54320 860 aa19.67■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Fabp5Q05816 135 aaKnown RBP19.67■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Tob1Q61471 362 aa19.67■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Gm10277Q6R5C6 214 aa19.67■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Olfr1101Q7TR59 310 aa19.67■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Lrrc75aQ7TSF4 339 aa19.67■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Hes7Q8BKT2 225 aa19.67■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Gpr89aQ8BS95 455 aa19.67■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Gm11541Q8C4D8 108 aa19.67■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Swsap1Q8VCI7 278 aa19.67■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Defb6Q91VD6 63 aa19.67■□□□□ 0.74
Scn1b-201ENSMUST00000098548 S1pr5Q91X56 400 aa19.67■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Dnmt3lQ9CWR8 421 aaKnown RBP19.67■□□□□ 0.74
Scn1b-201ENSMUST00000098548 CmipQ9D486 773 aa19.67■□□□□ 0.74
Scn1b-201ENSMUST00000098548 FancmQ8BGE5 2021 aa19.67■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Btbd35f21A0A140T8Q5 498 aa19.66■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Klri1B2KG20 248 aa19.66■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Gm5798F7BTS7 198 aa19.66■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Gm10097J3KMK7 105 aa19.66■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Btbd35f22J3QN64 498 aa19.66■□□□□ 0.74
Scn1b-201ENSMUST00000098548 P04945 108 aa19.66■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Hmga2P52927 108 aa19.66■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Gm826Q3UQ74 109 aa19.66■□□□□ 0.74
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms