RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 MT-ND2P03891 347 aa8.67□□□□□ -1.02
TUBE1-210ENST00000604967 GDNFP39905 211 aa8.67□□□□□ -1.02
TUBE1-210ENST00000604967 OR3A1P47881 315 aa8.67□□□□□ -1.02
TUBE1-210ENST00000604967 SOX2P48431 317 aa8.67□□□□□ -1.02
TUBE1-210ENST00000604967 RBP2P50120 134 aa8.67□□□□□ -1.02
TUBE1-210ENST00000604967 RPS11P62280 158 aaKnown RBP eCLIP8.67□□□□□ -1.02
TUBE1-210ENST00000604967 CDK5R1Q15078 307 aa8.67□□□□□ -1.02
TUBE1-210ENST00000604967 FBLN7Q53RD9 439 aa8.67□□□□□ -1.02
TUBE1-210ENST00000604967 HIST2H2BDQ6DRA6 164 aa8.67□□□□□ -1.02
TUBE1-210ENST00000604967 Q6P435 159 aa8.67□□□□□ -1.02
TUBE1-210ENST00000604967 ZNF782Q6ZMW2 699 aaPredicted RBP8.67□□□□□ -1.02
TUBE1-210ENST00000604967 C10orf67Q8IYJ2 551 aa8.67□□□□□ -1.02
TUBE1-210ENST00000604967 FAM58AQ8N1B3 248 aa8.67□□□□□ -1.02
TUBE1-210ENST00000604967 PARP16Q8N5Y8 322 aa8.67□□□□□ -1.02
TUBE1-210ENST00000604967 ZNF676Q8N7Q3 588 aa8.67□□□□□ -1.02
TUBE1-210ENST00000604967 ZFP41Q8N8Y5 198 aa8.67□□□□□ -1.02
TUBE1-210ENST00000604967 ASCC1Q8N9N2 400 aaKnown RBP8.67□□□□□ -1.02
TUBE1-210ENST00000604967 CCDC54Q8NEL0 328 aa8.67□□□□□ -1.02
TUBE1-210ENST00000604967 PPP1R35Q8TAP8 253 aa8.67□□□□□ -1.02
TUBE1-210ENST00000604967 SSMEM1Q8WWF3 244 aa8.67□□□□□ -1.02
TUBE1-210ENST00000604967 GGHQ92820 318 aa8.67□□□□□ -1.02
TUBE1-210ENST00000604967 EMG1Q92979 244 aaKnown RBP8.67□□□□□ -1.02
TUBE1-210ENST00000604967 Q96MT0 163 aa8.67□□□□□ -1.02
TUBE1-210ENST00000604967 OPALINQ96PE5 141 aa8.67□□□□□ -1.02
TUBE1-210ENST00000604967 ZCCHC4Q9H5U6 513 aa8.67□□□□□ -1.02
TUBE1-210ENST00000604967 HMG20AQ9NP66 347 aa8.67□□□□□ -1.02
TUBE1-210ENST00000604967 RPL36Q9Y3U8 105 aaKnown RBP8.67□□□□□ -1.02
TUBE1-210ENST00000604967 OGG1O15527 345 aa8.66□□□□□ -1.02
TUBE1-210ENST00000604967 ZNF20P17024 532 aa8.66□□□□□ -1.02
TUBE1-210ENST00000604967 COX7A1P24310 79 aa8.66□□□□□ -1.02
TUBE1-210ENST00000604967 ATP1B3P54709 279 aa8.66□□□□□ -1.02
TUBE1-210ENST00000604967 FOXL1Q12952 345 aa8.66□□□□□ -1.02
TUBE1-210ENST00000604967 ZNF146Q15072 292 aa8.66□□□□□ -1.02
TUBE1-210ENST00000604967 CNN3Q15417 329 aaKnown RBP8.66□□□□□ -1.02
TUBE1-210ENST00000604967 Q6ZSV7 163 aa8.66□□□□□ -1.02
TUBE1-210ENST00000604967 CMTM4Q8IZR5 234 aa8.66□□□□□ -1.02
TUBE1-210ENST00000604967 OR8H2Q8N162 312 aa8.66□□□□□ -1.02
TUBE1-210ENST00000604967 TMEM86BQ8N661 226 aa8.66□□□□□ -1.02
TUBE1-210ENST00000604967 PACRGLQ8N7B6 248 aa8.66□□□□□ -1.02
TUBE1-210ENST00000604967 FAM234AQ9H0X4 552 aa8.66□□□□□ -1.02
TUBE1-210ENST00000604967 SEBOXQ9HB31 216 aaPredicted RBP8.66□□□□□ -1.02
TUBE1-210ENST00000604967 INPP5EQ9NRR6 644 aa8.66□□□□□ -1.02
TUBE1-210ENST00000604967 FKBP14Q9NWM8 211 aa8.66□□□□□ -1.02
TUBE1-210ENST00000604967 TAS2R4Q9NYW5 299 aa8.66□□□□□ -1.02
TUBE1-210ENST00000604967 DIMT1Q9UNQ2 313 aaKnown RBP8.66□□□□□ -1.02
TUBE1-210ENST00000604967 POMT1Q9Y6A1 747 aa8.66□□□□□ -1.02
TUBE1-210ENST00000604967 TRAV8-7A0A075B6U6 113 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 FAM90A8PA6NJQ4 464 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 TMEM212A6NML5 194 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 ODF3BA8MYP8 253 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 H0YAE9 185 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 SIRPB1O00241 398 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 CHST1O43916 411 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 NDUFA7O95182 113 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 OR2H2O95918 312 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 SERPINA3P01011 423 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 CHRM2P08172 466 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 PRKACAP17612 351 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 PRKACBP22694 351 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 C21orf33P30042 268 aaPredicted RBP8.65□□□□□ -1.02
TUBE1-210ENST00000604967 RAG2P55895 527 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 EDDM3AQ14507 147 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 KISS1Q15726 138 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 KLHL22Q53GT1 634 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 DMKNQ6E0U4 476 aaPredicted RBP8.65□□□□□ -1.02
TUBE1-210ENST00000604967 LHFPL2Q6ZUX7 228 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 BEND2Q8NDZ0 799 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 ZNF555Q8NEP9 628 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 OR10K1Q8NGX5 313 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 OR5AK2Q8NH90 309 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 LINC01006Q8NI28 216 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 WFDC12Q8WWY7 111 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 STMN2Q93045 179 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 SPSB1Q96BD6 273 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 COQ2Q96H96 371 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 PGLYRP3Q96LB9 341 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 COMMD4Q9H0A8 199 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 GSTK1Q9Y2Q3 226 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 SIGLEC9Q9Y336 463 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 MMP24Q9Y5R2 645 aa8.65□□□□□ -1.02
TUBE1-210ENST00000604967 A0A0G2JK05 382 aa8.64□□□□□ -1.03
TUBE1-210ENST00000604967 TRBV5-5A0A0J9YX44 114 aa8.64□□□□□ -1.03
TUBE1-210ENST00000604967 SNTNA6NMZ2 147 aa8.64□□□□□ -1.03
TUBE1-210ENST00000604967 GABRPO00591 440 aa8.64□□□□□ -1.03
TUBE1-210ENST00000604967 SULT1B1O43704 296 aa8.64□□□□□ -1.03
TUBE1-210ENST00000604967 ALX3O95076 343 aa8.64□□□□□ -1.03
TUBE1-210ENST00000604967 FBP1P09467 338 aa8.64□□□□□ -1.03
TUBE1-210ENST00000604967 ZNF728P0DKX0 622 aa8.64□□□□□ -1.03
TUBE1-210ENST00000604967 LMO1P25800 156 aa8.64□□□□□ -1.03
TUBE1-210ENST00000604967 DCKP27707 260 aa8.64□□□□□ -1.03
TUBE1-210ENST00000604967 CAPGP40121 348 aa8.64□□□□□ -1.03
TUBE1-210ENST00000604967 GLIPR1P48060 266 aa8.64□□□□□ -1.03
TUBE1-210ENST00000604967 RAB13P51153 203 aa8.64□□□□□ -1.03
TUBE1-210ENST00000604967 GBX2P52951 348 aaPredicted RBP8.64□□□□□ -1.03
TUBE1-210ENST00000604967 GP2P55259 537 aaKnown RBP8.64□□□□□ -1.03
TUBE1-210ENST00000604967 EDDM3BP56851 147 aa8.64□□□□□ -1.03
TUBE1-210ENST00000604967 GUCA2AQ02747 115 aa8.64□□□□□ -1.03
TUBE1-210ENST00000604967 ST3GAL4Q11206 333 aa8.64□□□□□ -1.03
TUBE1-210ENST00000604967 NCR3LG1Q68D85 454 aa8.64□□□□□ -1.03
TUBE1-210ENST00000604967 CCBE1Q6UXH8 406 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms