RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 TMPRSS2O15393 492 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 NDUFB3O43676 98 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 CDRT1O95170 752 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 HTR3BO95264 441 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 ECDO95905 644 aaPredicted RBP10.16□□□□□ -0.78
DDX55-210ENST00000543016 IL1AP01583 271 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 FAM90A15PP0C7V4 464 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 FAM90A13PP0C7W8 464 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 FAM90A14PP0C7W9 464 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 FAM90A24PP0C7X0 464 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 PRKACAP17612 351 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 SDC2P34741 201 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 PITPNBP48739 271 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 TMBIM6P55061 237 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 SCAND1P57086 179 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 GMFBP60983 142 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 TMEM249Q2WGJ8 235 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 SLC22A6Q4U2R8 563 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 LRRC10Q5BKY1 277 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 CD276Q5ZPR3 534 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 CYB5R2Q6BCY4 276 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 OR2W3Q7Z3T1 314 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 C1QL2Q7Z5L3 287 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 OSR2Q8N2R0 312 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 LINC01356Q8N9X3 169 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 RAB2BQ8WUD1 216 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 CLN8Q9UBY8 286 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 POLR3KQ9Y2Y1 108 aaPredicted RBP10.16□□□□□ -0.78
DDX55-210ENST00000543016 MED13LQ71F56 2210 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 TEX15Q9BXT5 2789 aa10.15□□□□□ -0.78
DDX55-210ENST00000543016 SHISA3A0PJX4 238 aa10.15□□□□□ -0.78
DDX55-210ENST00000543016 NOL3O60936 208 aaKnown RBP10.15□□□□□ -0.78
DDX55-210ENST00000543016 HAND1O96004 215 aa10.15□□□□□ -0.78
DDX55-210ENST00000543016 INHBBP09529 407 aa10.15□□□□□ -0.78
DDX55-210ENST00000543016 ARSBP15848 533 aa10.15□□□□□ -0.78
DDX55-210ENST00000543016 LMO1P25800 156 aa10.15□□□□□ -0.78
DDX55-210ENST00000543016 GABRA2P47869 451 aa10.15□□□□□ -0.78
DDX55-210ENST00000543016 CAV3P56539 151 aa10.15□□□□□ -0.78
DDX55-210ENST00000543016 GNB2P62879 340 aa10.15□□□□□ -0.78
DDX55-210ENST00000543016 MPV17LQ2QL34 196 aa10.15□□□□□ -0.78
DDX55-210ENST00000543016 GPR107Q5VW38 600 aa10.15□□□□□ -0.78
DDX55-210ENST00000543016 C19orf18Q8NEA5 215 aa10.15□□□□□ -0.78
DDX55-210ENST00000543016 OR5D13Q8NGL4 314 aa10.15□□□□□ -0.78
DDX55-210ENST00000543016 SLC25A28Q96A46 364 aa10.15□□□□□ -0.78
DDX55-210ENST00000543016 PTX4Q96A99 478 aa10.15□□□□□ -0.78
DDX55-210ENST00000543016 C1orf147Q96MC9 270 aaPredicted RBP10.15□□□□□ -0.78
DDX55-210ENST00000543016 CCL13Q99616 98 aa10.15□□□□□ -0.78
DDX55-210ENST00000543016 GFI1Q99684 422 aa10.15□□□□□ -0.78
DDX55-210ENST00000543016 SSBP3Q9BWW4 388 aaPredicted RBP10.15□□□□□ -0.78
DDX55-210ENST00000543016 NARFLQ9H6Q4 476 aa10.15□□□□□ -0.78
DDX55-210ENST00000543016 IFT22Q9H7X7 185 aa10.15□□□□□ -0.78
DDX55-210ENST00000543016 SPACA1Q9HBV2 294 aa10.15□□□□□ -0.78
DDX55-210ENST00000543016 MALRD1Q5VYJ5 2156 aa10.15□□□□□ -0.79
DDX55-210ENST00000543016 TRAV20A0A0B4J274 112 aa10.14□□□□□ -0.79
DDX55-210ENST00000543016 DEGS1O15121 323 aa10.14□□□□□ -0.79
DDX55-210ENST00000543016 GLAP06280 429 aa10.14□□□□□ -0.79
DDX55-210ENST00000543016 LIPFP07098 398 aa10.14□□□□□ -0.79
DDX55-210ENST00000543016 AMY2BP19961 511 aa10.14□□□□□ -0.79
DDX55-210ENST00000543016 SERPINA2P20848 420 aa10.14□□□□□ -0.79
DDX55-210ENST00000543016 GATA3P23771 443 aa10.14□□□□□ -0.79
DDX55-210ENST00000543016 KCNJ3P48549 501 aa10.14□□□□□ -0.79
DDX55-210ENST00000543016 RBM11P57052 281 aaKnown RBP10.14□□□□□ -0.79
DDX55-210ENST00000543016 CTF1Q16619 201 aa10.14□□□□□ -0.79
DDX55-210ENST00000543016 WDR25Q64LD2 544 aaPredicted RBP10.14□□□□□ -0.79
DDX55-210ENST00000543016 SFXN4Q6P4A7 337 aa10.14□□□□□ -0.79
DDX55-210ENST00000543016 LYPD2Q6UXB3 125 aa10.14□□□□□ -0.79
DDX55-210ENST00000543016 ZNF841Q6ZN19 808 aa10.14□□□□□ -0.79
DDX55-210ENST00000543016 SLC16A12Q6ZSM3 486 aa10.14□□□□□ -0.79
DDX55-210ENST00000543016 USP43Q70EL4 1123 aa10.14□□□□□ -0.79
DDX55-210ENST00000543016 BIVMQ86UB2 503 aa10.14□□□□□ -0.79
DDX55-210ENST00000543016 OR5T2Q8NGG2 359 aa10.14□□□□□ -0.79
DDX55-210ENST00000543016 FAM3DQ96BQ1 224 aa10.14□□□□□ -0.79
DDX55-210ENST00000543016 SEH1LQ96EE3 360 aa10.14□□□□□ -0.79
DDX55-210ENST00000543016 SNX22Q96L94 193 aa10.14□□□□□ -0.79
DDX55-210ENST00000543016 GAFA1Q96PS6 74 aa10.14□□□□□ -0.79
DDX55-210ENST00000543016 URM1Q9BTM9 101 aaKnown RBP10.14□□□□□ -0.79
DDX55-210ENST00000543016 NDUFA13Q9P0J0 144 aa10.14□□□□□ -0.79
DDX55-210ENST00000543016 OR14J1Q9UGF5 321 aa10.14□□□□□ -0.79
DDX55-210ENST00000543016 OR5V1Q9UGF6 321 aa10.14□□□□□ -0.79
DDX55-210ENST00000543016 ST3GAL6Q9Y274 331 aa10.14□□□□□ -0.79
DDX55-210ENST00000543016 MAB21L2Q9Y586 359 aa10.14□□□□□ -0.79
DDX55-210ENST00000543016 TRBV23-1A0A0A0MS06 115 aa10.13□□□□□ -0.79
DDX55-210ENST00000543016 A0A0G2JK05 382 aa10.13□□□□□ -0.79
DDX55-210ENST00000543016 FUOMA2VDF0 154 aa10.13□□□□□ -0.79
DDX55-210ENST00000543016 TMEM14DPA8MWL7 114 aa10.13□□□□□ -0.79
DDX55-210ENST00000543016 K7N7A8 449 aa10.13□□□□□ -0.79
DDX55-210ENST00000543016 DVL1O14640 695 aa10.13□□□□□ -0.79
DDX55-210ENST00000543016 CRTAPO75718 401 aaPredicted RBP10.13□□□□□ -0.79
DDX55-210ENST00000543016 MSMBP08118 114 aa10.13□□□□□ -0.79
DDX55-210ENST00000543016 IGHV4-31P0DP07 118 aa10.13□□□□□ -0.79
DDX55-210ENST00000543016 VSIG8P0DPA2 414 aa10.13□□□□□ -0.79
DDX55-210ENST00000543016 CALCBP10092 127 aa10.13□□□□□ -0.79
DDX55-210ENST00000543016 MGMTP16455 207 aa10.13□□□□□ -0.79
DDX55-210ENST00000543016 RAB6AP20340 208 aa10.13□□□□□ -0.79
DDX55-210ENST00000543016 DVL1P1P54792 670 aaPredicted RBP10.13□□□□□ -0.79
DDX55-210ENST00000543016 OR10A3P58181 314 aa10.13□□□□□ -0.79
DDX55-210ENST00000543016 LSM3P62310 102 aaKnown RBP10.13□□□□□ -0.79
DDX55-210ENST00000543016 QRFPP83859 136 aa10.13□□□□□ -0.79
DDX55-210ENST00000543016 HOXA4Q00056 320 aaPredicted RBP10.13□□□□□ -0.79
DDX55-210ENST00000543016 HNRNPA0Q13151 305 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms