RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.41□□□□□ -1.22
FXR1-203ENST00000445140 GPR173Q9NS66 373 aa7.41□□□□□ -1.22
FXR1-203ENST00000445140 CLEC2LP0C7M8 214 aa7.41□□□□□ -1.22
FXR1-203ENST00000445140 SNTB1Q13884 538 aaKnown RBP7.41□□□□□ -1.22
FXR1-203ENST00000445140 DGUOKQ16854 277 aa7.41□□□□□ -1.22
FXR1-203ENST00000445140 SPIN3Q5JUX0 258 aa7.41□□□□□ -1.22
FXR1-203ENST00000445140 ATPAF1Q5TC12 328 aaPredicted RBP7.41□□□□□ -1.22
FXR1-203ENST00000445140 SFXN4Q6P4A7 337 aa7.41□□□□□ -1.22
FXR1-203ENST00000445140 OR8S1Q8NH09 359 aa7.41□□□□□ -1.22
FXR1-203ENST00000445140 ST8SIA2Q92186 375 aa7.41□□□□□ -1.22
FXR1-203ENST00000445140 RDH5Q92781 318 aa7.41□□□□□ -1.22
FXR1-203ENST00000445140 TMEM203Q969S6 136 aa7.41□□□□□ -1.22
FXR1-203ENST00000445140 RNF170Q96K19 258 aa7.41□□□□□ -1.22
FXR1-203ENST00000445140 WDFY2Q96P53 400 aa7.41□□□□□ -1.22
FXR1-203ENST00000445140 DYNLRB1Q9NP97 96 aa7.41□□□□□ -1.22
FXR1-203ENST00000445140 NPTNQ9Y639 398 aa7.41□□□□□ -1.22
FXR1-203ENST00000445140 TENM4Q6N022 2769 aa7.4□□□□□ -1.22
FXR1-203ENST00000445140 DSCAMO60469 2012 aa7.4□□□□□ -1.22
FXR1-203ENST00000445140 LOC100289279A0A1B0GTE1 492 aa7.4□□□□□ -1.22
FXR1-203ENST00000445140 TNFRSF13BO14836 293 aaPredicted RBP7.4□□□□□ -1.22
FXR1-203ENST00000445140 CA11O75493 328 aa7.4□□□□□ -1.22
FXR1-203ENST00000445140 CCNKO75909 580 aa7.4□□□□□ -1.22
FXR1-203ENST00000445140 SDC2P34741 201 aa7.4□□□□□ -1.22
FXR1-203ENST00000445140 PTGFRP43088 359 aa7.4□□□□□ -1.22
FXR1-203ENST00000445140 RORCP51449 518 aa7.4□□□□□ -1.22
FXR1-203ENST00000445140 INSL4Q14641 139 aa7.4□□□□□ -1.22
FXR1-203ENST00000445140 RAB11BQ15907 218 aa7.4□□□□□ -1.22
FXR1-203ENST00000445140 TMEM155Q4W5P6 130 aa7.4□□□□□ -1.22
FXR1-203ENST00000445140 FAM27D1Q5T7N8 215 aa7.4□□□□□ -1.22
FXR1-203ENST00000445140 WDR82Q6UXN9 313 aa7.4□□□□□ -1.22
FXR1-203ENST00000445140 NR2C2APQ86WQ0 139 aa7.4□□□□□ -1.22
FXR1-203ENST00000445140 C1orf87Q8N0U7 546 aa7.4□□□□□ -1.22
FXR1-203ENST00000445140 OR52N4Q8NGI2 321 aa7.4□□□□□ -1.22
FXR1-203ENST00000445140 OR11L1Q8NGX0 322 aa7.4□□□□□ -1.22
FXR1-203ENST00000445140 AKIP1Q9NQ31 210 aa7.4□□□□□ -1.22
FXR1-203ENST00000445140 DUSP13Q9UII6 198 aa7.4□□□□□ -1.22
FXR1-203ENST00000445140 TRAV6A0A075B6T7 132 aa7.4□□□□□ -1.23
FXR1-203ENST00000445140 PNMA8CA0A1B0GUJ8 204 aa7.4□□□□□ -1.23
FXR1-203ENST00000445140 FOXI3A8MTJ6 420 aaPredicted RBP7.4□□□□□ -1.23
FXR1-203ENST00000445140 ZNF732B4DXR9 585 aa7.4□□□□□ -1.23
FXR1-203ENST00000445140 SHOXO15266 292 aa7.4□□□□□ -1.23
FXR1-203ENST00000445140 NDUFA2O43678 99 aa7.4□□□□□ -1.23
FXR1-203ENST00000445140 KNG1P01042 644 aa7.4□□□□□ -1.23
FXR1-203ENST00000445140 PTBP1P26599 531 aaKnown RBP eCLIP7.4□□□□□ -1.237e-7■■■□□ 15.4
FXR1-203ENST00000445140 HTR2CP28335 458 aa7.4□□□□□ -1.23
FXR1-203ENST00000445140 NCS1P62166 190 aa7.4□□□□□ -1.23
FXR1-203ENST00000445140 ZNF846Q147U1 533 aa7.4□□□□□ -1.23
FXR1-203ENST00000445140 ZMYND11Q15326 602 aa7.4□□□□□ -1.23
FXR1-203ENST00000445140 ODF4Q2M2E3 257 aa7.4□□□□□ -1.23
FXR1-203ENST00000445140 TOR2AQ5JU69 321 aa7.4□□□□□ -1.23
FXR1-203ENST00000445140 ATAD3CQ5T2N8 411 aa7.4□□□□□ -1.23
FXR1-203ENST00000445140 NLRC3Q7RTR2 1065 aa7.4□□□□□ -1.23
FXR1-203ENST00000445140 LINC00518Q8N0U6 118 aa7.4□□□□□ -1.23
FXR1-203ENST00000445140 FAM89BQ8N5H3 189 aa7.4□□□□□ -1.23
FXR1-203ENST00000445140 SCCPDHQ8NBX0 429 aa7.4□□□□□ -1.23
FXR1-203ENST00000445140 C1orf159Q96HA4 380 aa7.4□□□□□ -1.23
FXR1-203ENST00000445140 OR2V2Q96R30 315 aa7.4□□□□□ -1.23
FXR1-203ENST00000445140 CCL19Q99731 98 aa7.4□□□□□ -1.23
FXR1-203ENST00000445140 ABCG5Q9H222 651 aa7.4□□□□□ -1.23
FXR1-203ENST00000445140 OR51B6Q9H340 312 aa7.4□□□□□ -1.23
FXR1-203ENST00000445140 GCM1Q9NP62 436 aa7.4□□□□□ -1.23
FXR1-203ENST00000445140 EXOSC4Q9NPD3 245 aaKnown RBP7.4□□□□□ -1.23
FXR1-203ENST00000445140 SPATA2Q9UM82 520 aa7.4□□□□□ -1.23
FXR1-203ENST00000445140 TSPAN4O14817 238 aa7.39□□□□□ -1.23
FXR1-203ENST00000445140 CDRT1O95170 752 aa7.39□□□□□ -1.23
FXR1-203ENST00000445140 MUC1P15941 1255 aaPredicted RBP7.39□□□□□ -1.23
FXR1-203ENST00000445140 RPS19P39019 145 aaKnown RBP7.39□□□□□ -1.23
FXR1-203ENST00000445140 MTCP1P56278 107 aa7.39□□□□□ -1.23
FXR1-203ENST00000445140 FGF12P61328 243 aa7.39□□□□□ -1.23
FXR1-203ENST00000445140 ZNF146Q15072 292 aa7.39□□□□□ -1.23
FXR1-203ENST00000445140 MPV17LQ2QL34 196 aa7.39□□□□□ -1.23
FXR1-203ENST00000445140 FAM209BQ5JX69 171 aa7.39□□□□□ -1.23
FXR1-203ENST00000445140 PPP1R35Q8TAP8 253 aa7.39□□□□□ -1.23
FXR1-203ENST00000445140 GTF3AQ92664 365 aaKnown RBP7.39□□□□□ -1.23
FXR1-203ENST00000445140 SLIRPQ9GZT3 109 aaKnown RBP7.39□□□□□ -1.23
FXR1-203ENST00000445140 CNTD2Q9H8S5 307 aa7.39□□□□□ -1.23
FXR1-203ENST00000445140 UBTD1Q9HAC8 227 aa7.39□□□□□ -1.23
FXR1-203ENST00000445140 RCC2Q9P258 522 aaKnown RBP7.39□□□□□ -1.23
FXR1-203ENST00000445140 KAAG1Q9UBP8 84 aa7.39□□□□□ -1.23
FXR1-203ENST00000445140 HELZ2Q9BYK8 2649 aaKnown RBP7.39□□□□□ -1.23
FXR1-203ENST00000445140 RTTNQ86VV8 2226 aa7.39□□□□□ -1.23
FXR1-203ENST00000445140 USP9YO00507 2555 aaPredicted RBP7.39□□□□□ -1.23
FXR1-203ENST00000445140 DYSFO75923 2080 aa7.39□□□□□ -1.23
FXR1-203ENST00000445140 LOC100506127A0A0U1RQW1 187 aa7.39□□□□□ -1.23
FXR1-203ENST00000445140 LRRC30A6NM36 301 aa7.39□□□□□ -1.23
FXR1-203ENST00000445140 VWC2LB2RUY7 222 aa7.39□□□□□ -1.23
FXR1-203ENST00000445140 H0YL77 283 aa7.39□□□□□ -1.23
FXR1-203ENST00000445140 NCR1O76036 304 aa7.39□□□□□ -1.23
FXR1-203ENST00000445140 HCKP08631 526 aa7.39□□□□□ -1.23
FXR1-203ENST00000445140 LMO1P25800 156 aa7.39□□□□□ -1.23
FXR1-203ENST00000445140 SOX6P35712 828 aa7.39□□□□□ -1.23
FXR1-203ENST00000445140 ETV6P41212 452 aa7.39□□□□□ -1.23
FXR1-203ENST00000445140 KCNJ3P48549 501 aa7.39□□□□□ -1.23
FXR1-203ENST00000445140 SERPINB10P48595 397 aa7.39□□□□□ -1.23
FXR1-203ENST00000445140 ARL6IP1Q15041 203 aa7.39□□□□□ -1.23
FXR1-203ENST00000445140 BAIAP2L2Q6UXY1 529 aa7.39□□□□□ -1.23
FXR1-203ENST00000445140 MINDY2Q8NBR6 621 aa7.39□□□□□ -1.23
FXR1-203ENST00000445140 OR2Z1Q8NG97 314 aa7.39□□□□□ -1.23
FXR1-203ENST00000445140 KCNG3Q8TAE7 436 aa7.39□□□□□ -1.23
FXR1-203ENST00000445140 ITLN1Q8WWA0 313 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms