RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 CA6P23280 308 aa10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 GATA3P23771 443 aa10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 BDKRB2P30411 391 aa10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 ALDH3B1P43353 468 aa10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 SERPINB10P48595 397 aa10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 VBP1P61758 197 aa10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 MZT1Q08AG7 82 aa10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 SLC9A3R2Q15599 337 aa10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 KLF17Q5JT82 389 aaPredicted RBP10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 CEP78Q5JTW2 689 aa10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 FAM27D1Q5T7N8 215 aa10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 UNQ9370/PRO34162Q6UXP9 181 aa10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 LRP11Q86VZ4 500 aa10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 OR8G5Q8NG78 346 aa10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 OR1M1Q8NGA1 313 aa10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 OR13G1Q8NGZ3 307 aa10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 NPRL2Q8WTW4 380 aa10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 ISOC1Q96CN7 298 aa10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 ORAI1Q96D31 301 aa10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 CPNE2Q96FN4 548 aaPredicted RBP10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 CITED1Q99966 193 aa10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 MICU1Q9BPX6 476 aa10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 BCL7BQ9BQE9 202 aa10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 ADAT1Q9BUB4 502 aaKnown RBP10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 CHST5Q9GZS9 411 aa10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 SNTG1Q9NSN8 517 aa10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 MYEF2Q9P2K5 600 aaKnown RBP10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 RHBDD3Q9Y3P4 386 aa10.46□□□□□ -0.73
CLSTN3-208ENST00000538933 IGLV3-9A0A075B6K5 115 aa10.45□□□□□ -0.74
CLSTN3-208ENST00000538933 FAM230AA0A1W2PPH8 454 aa10.45□□□□□ -0.74
CLSTN3-208ENST00000538933 MEGF11A6BM72 1044 aa10.45□□□□□ -0.74
CLSTN3-208ENST00000538933 SLC22A1O15245 554 aa10.45□□□□□ -0.74
CLSTN3-208ENST00000538933 TPD52L2O43399 206 aaKnown RBP10.45□□□□□ -0.74
CLSTN3-208ENST00000538933 GMDSO60547 372 aa10.45□□□□□ -0.74
CLSTN3-208ENST00000538933 SC5DO75845 299 aa10.45□□□□□ -0.74
CLSTN3-208ENST00000538933 CDRT1O95170 752 aa10.45□□□□□ -0.74
CLSTN3-208ENST00000538933 CST4P01036 141 aa10.45□□□□□ -0.74
CLSTN3-208ENST00000538933 IGHV2-5P01817 119 aa10.45□□□□□ -0.74
CLSTN3-208ENST00000538933 FSTP19883 344 aa10.45□□□□□ -0.74
CLSTN3-208ENST00000538933 PRKACBP22694 351 aa10.45□□□□□ -0.74
CLSTN3-208ENST00000538933 TNFSF4P23510 183 aa10.45□□□□□ -0.74
CLSTN3-208ENST00000538933 OMGP23515 440 aa10.45□□□□□ -0.74
CLSTN3-208ENST00000538933 NCS1P62166 190 aa10.45□□□□□ -0.74
CLSTN3-208ENST00000538933 MXD1Q05195 221 aa10.45□□□□□ -0.74
CLSTN3-208ENST00000538933 BAMBIQ13145 260 aa10.45□□□□□ -0.74
CLSTN3-208ENST00000538933 AVPI1Q5T686 147 aa10.45□□□□□ -0.74
CLSTN3-208ENST00000538933 SLC16A12Q6ZSM3 486 aa10.45□□□□□ -0.74
CLSTN3-208ENST00000538933 Q6ZSR3 168 aa10.45□□□□□ -0.74
CLSTN3-208ENST00000538933 UTS2BQ765I0 119 aa10.45□□□□□ -0.74
CLSTN3-208ENST00000538933 TRMT10AQ8TBZ6 339 aaKnown RBP10.45□□□□□ -0.74
CLSTN3-208ENST00000538933 BORCS8Q96FH0 119 aa10.45□□□□□ -0.74
CLSTN3-208ENST00000538933 GPER1Q99527 375 aa10.45□□□□□ -0.74
CLSTN3-208ENST00000538933 RTL8AQ9BWD3 113 aa10.45□□□□□ -0.74
CLSTN3-208ENST00000538933 FAM192AQ9GZU8 254 aa10.45□□□□□ -0.74
CLSTN3-208ENST00000538933 MSL2Q9HCI7 577 aa10.45□□□□□ -0.74
CLSTN3-208ENST00000538933 TMEM138Q9NPI0 162 aa10.45□□□□□ -0.74
CLSTN3-208ENST00000538933 CEPT1Q9Y6K0 416 aa10.45□□□□□ -0.74
CLSTN3-208ENST00000538933 PIN1P1O15428 100 aa10.44□□□□□ -0.74
CLSTN3-208ENST00000538933 SPRY3O43610 288 aa10.44□□□□□ -0.74
CLSTN3-208ENST00000538933 RAB3BP20337 219 aa10.44□□□□□ -0.74
CLSTN3-208ENST00000538933 AZGP1P25311 298 aaKnown RBP10.44□□□□□ -0.74
CLSTN3-208ENST00000538933 MTNR1BP49286 362 aa10.44□□□□□ -0.74
CLSTN3-208ENST00000538933 ZNF81P51508 661 aa10.44□□□□□ -0.74
CLSTN3-208ENST00000538933 PSMD7P51665 324 aa10.44□□□□□ -0.74
CLSTN3-208ENST00000538933 ATP1B3P54709 279 aa10.44□□□□□ -0.74
CLSTN3-208ENST00000538933 KRTAP10-3P60369 221 aa10.44□□□□□ -0.74
CLSTN3-208ENST00000538933 DDI2Q5TDH0 399 aa10.44□□□□□ -0.74
CLSTN3-208ENST00000538933 GLT8D1Q68CQ7 371 aa10.44□□□□□ -0.74
CLSTN3-208ENST00000538933 ASPHD2Q6ICH7 369 aa10.44□□□□□ -0.74
CLSTN3-208ENST00000538933 TPRA1Q86W33 373 aa10.44□□□□□ -0.74
CLSTN3-208ENST00000538933 JAGN1Q8N5M9 183 aa10.44□□□□□ -0.74
CLSTN3-208ENST00000538933 NKAIN3Q8N8D7 197 aa10.44□□□□□ -0.74
CLSTN3-208ENST00000538933 PNLDC1Q8NA58 520 aaKnown RBP10.44□□□□□ -0.74
CLSTN3-208ENST00000538933 SPERTQ8NA61 448 aa10.44□□□□□ -0.74
CLSTN3-208ENST00000538933 OR2Z1Q8NG97 314 aa10.44□□□□□ -0.74
CLSTN3-208ENST00000538933 SLC25A28Q96A46 364 aa10.44□□□□□ -0.74
CLSTN3-208ENST00000538933 SPSB1Q96BD6 273 aa10.44□□□□□ -0.74
CLSTN3-208ENST00000538933 C12orf43Q96C57 262 aaKnown RBP10.44□□□□□ -0.74
CLSTN3-208ENST00000538933 DGCR14Q96DF8 476 aaKnown RBP10.44□□□□□ -0.74
CLSTN3-208ENST00000538933 ELMOD3Q96FG2 381 aa10.44□□□□□ -0.74
CLSTN3-208ENST00000538933 RNF170Q96K19 258 aa10.44□□□□□ -0.74
CLSTN3-208ENST00000538933 SLC30A2Q9BRI3 323 aa10.44□□□□□ -0.74
CLSTN3-208ENST00000538933 RNF167Q9H6Y7 350 aa10.44□□□□□ -0.74
CLSTN3-208ENST00000538933 C14orf119Q9NWQ9 140 aa10.44□□□□□ -0.74
CLSTN3-208ENST00000538933 NUP50Q9UKX7 468 aa10.44□□□□□ -0.74
CLSTN3-208ENST00000538933 ZDHHC8Q9ULC8 765 aa10.44□□□□□ -0.74
CLSTN3-208ENST00000538933 AK6Q9Y3D8 172 aaKnown RBP10.44□□□□□ -0.74
CLSTN3-208ENST00000538933 TRAV8-7A0A075B6U6 113 aa10.43□□□□□ -0.74
CLSTN3-208ENST00000538933 TRAV1-2A0A0B4J238 106 aa10.43□□□□□ -0.74
CLSTN3-208ENST00000538933 OR5B21A6NL26 309 aa10.43□□□□□ -0.74
CLSTN3-208ENST00000538933 NAT2P11245 290 aa10.43□□□□□ -0.74
CLSTN3-208ENST00000538933 SDC2P34741 201 aa10.43□□□□□ -0.74
CLSTN3-208ENST00000538933 TGFBR1P36897 503 aa10.43□□□□□ -0.74
CLSTN3-208ENST00000538933 FUT6P51993 359 aa10.43□□□□□ -0.74
CLSTN3-208ENST00000538933 MTCP1P56278 107 aa10.43□□□□□ -0.74
CLSTN3-208ENST00000538933 CTF1Q16619 201 aa10.43□□□□□ -0.74
CLSTN3-208ENST00000538933 DMRTC1Q5HYR2 192 aa10.43□□□□□ -0.74
CLSTN3-208ENST00000538933 TMEM42Q69YG0 159 aa10.43□□□□□ -0.74
CLSTN3-208ENST00000538933 Q6ZPA2 131 aa10.43□□□□□ -0.74
CLSTN3-208ENST00000538933 LHFPL2Q6ZUX7 228 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms