RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 RBP7Q96R05 134 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 OR2M2Q96R28 347 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 ZNF587Q96SQ5 575 aaPredicted RBP2.53□□□□□ -2
SCARNA13-201ENST00000516672 ZNF649Q9BS31 505 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 ALG12Q9BV10 488 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 KATNB1Q9BVA0 655 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 ZNF416Q9BWM5 594 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 MRPL13Q9BYD1 178 aaKnown RBP2.53□□□□□ -2
SCARNA13-201ENST00000516672 DPAGT1Q9H3H5 408 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 GHITMQ9H3K2 345 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 TXNIPQ9H3M7 391 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 ZCCHC4Q9H5U6 513 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 NRIP3Q9NQ35 241 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 TUBG2Q9NRH3 451 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 CA10Q9NS85 328 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 SNTG1Q9NSN8 517 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 C20orf141Q9NUB4 165 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 RBFOX1Q9NWB1 397 aaKnown RBP2.53□□□□□ -2
SCARNA13-201ENST00000516672 TXNL4BQ9NX01 149 aaKnown RBP2.53□□□□□ -2
SCARNA13-201ENST00000516672 IL20Q9NYY1 176 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 DNAJC27Q9NZQ0 273 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 KIF17Q9P2E2 1029 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 UPB1Q9UBR1 384 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 ENOPH1Q9UHY7 261 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 VPREB3Q9UKI3 123 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 RABL2BQ9UNT1 228 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 BAIAP2Q9UQB8 552 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 SIGLEC7Q9Y286 467 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 POLR3KQ9Y2Y1 108 aaPredicted RBP2.53□□□□□ -2
SCARNA13-201ENST00000516672 AMDHD2Q9Y303 409 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 HSPB11Q9Y547 144 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 SLC25A15Q9Y619 301 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 NPTNQ9Y639 398 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 CDH10Q9Y6N8 788 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 U3KQ87 197 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 DNAH8Q96JB1 4490 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 IGHV3-15A0A0B4J1V0 119 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 TRBV4-1A0A0J9YWV2 114 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 A0A1W2PQL4 384 aaPredicted RBP2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 TMEM129A0AVI4 362 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 SLC22A23A1A5C7 686 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 MFSD2BA6NFX1 497 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 UNC119BA6NIH7 251 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 INMT-MINDY4F8WBC2 141 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 BLOC1S5-TXNDC5H3BN57 136 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 H3BUI4 141 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 PANO1I0J062 215 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 I3L521 148 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 J3KTA2 159 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 XKRYO14609 159 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 CDC42EP2O14613 210 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 TOR1AO14656 332 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 FABP7O15540 132 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 LYRM1O43325 122 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 LANCL1O43813 399 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 OR10H3O60404 316 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 HPGDSO60760 199 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 KRT33AO76009 404 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 FARS2O95363 451 aaKnown RBP2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 PAHP00439 452 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 LALBAP00709 142 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 GASTP01350 101 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 ACSM4P0C7M7 580 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 HSMCR30P0CW71 290 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 PGA4P0DJD7 388 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 PGA3P0DJD8 388 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 SULT1A3P0DMM9 295 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 SULT1A4P0DMN0 295 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 OR8G3PP0DMU2 310 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 EGR2P11161 476 aaPredicted RBP2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 ZP3P21754 424 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 IGHV1-2P23083 117 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 AHCYP23526 432 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 CRABP1P29762 137 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 SLC6A1P30531 599 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 SDHAP31040 664 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 FGF9P31371 208 aaPredicted RBP2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 SLC6A6P31641 620 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 ARR3P36575 388 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 AQP2P41181 271 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 CSNK1A1P48729 337 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 EVX1P49640 407 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 ETV1P50549 477 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 RORCP51449 518 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 ZNF84P51523 738 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 GBX2P52951 348 aaPredicted RBP2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 BLVRAP53004 296 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 CRISP1P54107 249 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 CAV3P56539 151 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 CLDN17P56750 224 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 ZP1P60852 638 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 PCBD1P61457 104 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 LSM6P62312 80 aaKnown RBP2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 PPP3R1P63098 170 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 MRPS11P82912 194 aaKnown RBP2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 MRPS34P82930 218 aaKnown RBP2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 EFNB1P98172 346 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 FABP5Q01469 135 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 SPIBQ01892 262 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 POU3F1Q03052 451 aaPredicted RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms