RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 ASPHD2Q6ICH7 369 aa9.71□□□□□ -0.86
HMGXB3-203ENST00000510472 TMPRSS11AQ6ZMR5 421 aa9.71□□□□□ -0.86
HMGXB3-203ENST00000510472 RNF144BQ7Z419 303 aa9.71□□□□□ -0.86
HMGXB3-203ENST00000510472 OR5AK2Q8NH90 309 aa9.71□□□□□ -0.86
HMGXB3-203ENST00000510472 C8orf46Q8TAG6 207 aa9.71□□□□□ -0.86
HMGXB3-203ENST00000510472 TRMT10AQ8TBZ6 339 aaKnown RBP9.71□□□□□ -0.86
HMGXB3-203ENST00000510472 SPSB1Q96BD6 273 aa9.71□□□□□ -0.86
HMGXB3-203ENST00000510472 MRI1Q9BV20 369 aa9.71□□□□□ -0.86
HMGXB3-203ENST00000510472 SEBOXQ9HB31 216 aaPredicted RBP9.71□□□□□ -0.86
HMGXB3-203ENST00000510472 COL6A5A8TX70 2615 aa9.71□□□□□ -0.86
HMGXB3-203ENST00000510472 TRBV2A0A0J9YWF9 115 aa9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 RFPL4AA6NLU0 287 aa9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 ZNF879B4DU55 563 aa9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 RFPL4AL1F8VTS6 287 aa9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 NDUFB3O43676 98 aa9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 PLATP00750 562 aa9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 MYL12AP19105 171 aa9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 PRKACBP22694 351 aa9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 PRDX2P32119 198 aa9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 RBP2P50120 134 aa9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 CAV3P56539 151 aa9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 FGF12P61328 243 aa9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 IL13RA1P78552 427 aa9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 IKZF1Q13422 519 aa9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 CNN3Q15417 329 aaKnown RBP9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 C6orf141Q5SZD1 244 aa9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 RNLSQ5VYX0 342 aa9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 C9orf139Q6ZV77 190 aa9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 ZNRF1Q8ND25 227 aa9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 BPIFB6Q8NFQ5 453 aa9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 OR13C3Q8NGS6 347 aa9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 NPRL2Q8WTW4 380 aa9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 GATAD2BQ8WXI9 593 aa9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 BORCS8Q96FH0 119 aa9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 TBX15Q96SF7 602 aa9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 DCTN5Q9BTE1 182 aa9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 ANKRD60Q9BZ19 345 aa9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 SIRPDQ9H106 197 aa9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 ZCCHC4Q9H5U6 513 aa9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 CNTD2Q9H8S5 307 aa9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 ZNF69Q9UC07 566 aa9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 NUP50Q9UKX7 468 aa9.7□□□□□ -0.86
HMGXB3-203ENST00000510472 TCF21O43680 179 aa9.69□□□□□ -0.86
HMGXB3-203ENST00000510472 VENTXO95231 258 aa9.69□□□□□ -0.86
HMGXB3-203ENST00000510472 KNG1P01042 644 aa9.69□□□□□ -0.86
HMGXB3-203ENST00000510472 IGHV4-38-2P0DP08 117 aa9.69□□□□□ -0.86
HMGXB3-203ENST00000510472 ZNF20P17024 532 aa9.69□□□□□ -0.86
HMGXB3-203ENST00000510472 MYF6P23409 242 aa9.69□□□□□ -0.86
HMGXB3-203ENST00000510472 AZGP1P25311 298 aaKnown RBP9.69□□□□□ -0.86
HMGXB3-203ENST00000510472 ATP1B3P54709 279 aa9.69□□□□□ -0.86
HMGXB3-203ENST00000510472 MTCP1P56278 107 aa9.69□□□□□ -0.86
HMGXB3-203ENST00000510472 RPS11P62280 158 aaKnown RBP eCLIP9.69□□□□□ -0.86
HMGXB3-203ENST00000510472 SRSF2Q01130 221 aaKnown RBP9.69□□□□□ -0.86
HMGXB3-203ENST00000510472 PDZK1IP1Q13113 114 aa9.69□□□□□ -0.86
HMGXB3-203ENST00000510472 SCGB2A2Q13296 93 aa9.69□□□□□ -0.86
HMGXB3-203ENST00000510472 SMIM21Q3B7S5 101 aa9.69□□□□□ -0.86
HMGXB3-203ENST00000510472 KRTAP24-1Q3LI83 254 aa9.69□□□□□ -0.86
HMGXB3-203ENST00000510472 LRRC10Q5BKY1 277 aa9.69□□□□□ -0.86
HMGXB3-203ENST00000510472 SLC25A26Q70HW3 274 aa9.69□□□□□ -0.86
HMGXB3-203ENST00000510472 SERPINA12Q8IW75 414 aa9.69□□□□□ -0.86
HMGXB3-203ENST00000510472 NANOGP1Q8N7R0 232 aa9.69□□□□□ -0.86
HMGXB3-203ENST00000510472 PNLDC1Q8NA58 520 aaKnown RBP9.69□□□□□ -0.86
HMGXB3-203ENST00000510472 OR5D14Q8NGL3 314 aa9.69□□□□□ -0.86
HMGXB3-203ENST00000510472 GPR148Q8TDV2 347 aa9.69□□□□□ -0.86
HMGXB3-203ENST00000510472 ST8SIA4Q92187 359 aa9.69□□□□□ -0.86
HMGXB3-203ENST00000510472 SMIM19Q96E16 107 aa9.69□□□□□ -0.86
HMGXB3-203ENST00000510472 PGLYRP3Q96LB9 341 aa9.69□□□□□ -0.86
HMGXB3-203ENST00000510472 CEP19Q96LK0 163 aa9.69□□□□□ -0.86
HMGXB3-203ENST00000510472 WDFY2Q96P53 400 aa9.69□□□□□ -0.86
HMGXB3-203ENST00000510472 CDCA4Q9BXL8 241 aa9.69□□□□□ -0.86
HMGXB3-203ENST00000510472 COMMD4Q9H0A8 199 aa9.69□□□□□ -0.86
HMGXB3-203ENST00000510472 SLC25A10Q9UBX3 287 aaPredicted RBP9.69□□□□□ -0.86
HMGXB3-203ENST00000510472 IGKV1-12A0A0C4DH73 117 aa9.68□□□□□ -0.86
HMGXB3-203ENST00000510472 TRBV5-5A0A0J9YX44 114 aa9.68□□□□□ -0.86
HMGXB3-203ENST00000510472 NKX6-3A6NJ46 265 aa9.68□□□□□ -0.86
HMGXB3-203ENST00000510472 ZNF737O75373 536 aa9.68□□□□□ -0.86
HMGXB3-203ENST00000510472 NXPH2O95156 264 aa9.68□□□□□ -0.86
HMGXB3-203ENST00000510472 ATP6V1G2O95670 118 aa9.68□□□□□ -0.86
HMGXB3-203ENST00000510472 IGKV1D-12P01611 117 aa9.68□□□□□ -0.86
HMGXB3-203ENST00000510472 SFTPBP07988 381 aa9.68□□□□□ -0.86
HMGXB3-203ENST00000510472 GABRA2P47869 451 aa9.68□□□□□ -0.86
HMGXB3-203ENST00000510472 NPBWR2P48146 333 aa9.68□□□□□ -0.86
HMGXB3-203ENST00000510472 HILS1P60008 231 aa9.68□□□□□ -0.86
HMGXB3-203ENST00000510472 ZP1P60852 638 aa9.68□□□□□ -0.86
HMGXB3-203ENST00000510472 ARF6P62330 175 aa9.68□□□□□ -0.86
HMGXB3-203ENST00000510472 MED21Q13503 144 aa9.68□□□□□ -0.86
HMGXB3-203ENST00000510472 ARMCX4Q5H9R4 360 aa9.68□□□□□ -0.86
HMGXB3-203ENST00000510472 C1orf122Q6ZSJ8 110 aa9.68□□□□□ -0.86
HMGXB3-203ENST00000510472 LHFPL2Q6ZUX7 228 aa9.68□□□□□ -0.86
HMGXB3-203ENST00000510472 AHSA2Q719I0 299 aa9.68□□□□□ -0.86
HMGXB3-203ENST00000510472 BCL6BQ8N143 479 aaPredicted RBP9.68□□□□□ -0.86
HMGXB3-203ENST00000510472 ZNF561Q8N587 486 aa9.68□□□□□ -0.86
HMGXB3-203ENST00000510472 Q8N7P7 452 aa9.68□□□□□ -0.86
HMGXB3-203ENST00000510472 OR13C9Q8NGT0 318 aa9.68□□□□□ -0.86
HMGXB3-203ENST00000510472 TMEM158Q8WZ71 300 aa9.68□□□□□ -0.86
HMGXB3-203ENST00000510472 GHSRQ92847 366 aa9.68□□□□□ -0.86
HMGXB3-203ENST00000510472 OPALINQ96PE5 141 aa9.68□□□□□ -0.86
HMGXB3-203ENST00000510472 SLC6A7Q99884 636 aa9.68□□□□□ -0.86
HMGXB3-203ENST00000510472 PRDM13Q9H4Q3 707 aa9.68□□□□□ -0.86
HMGXB3-203ENST00000510472 DUSP21Q9H596 190 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms