RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 XPNPEP2O43895 674 aa13.3□□□□□ -0.28
DNMT3A-215ENST00000496570 LIPFP07098 398 aa13.3□□□□□ -0.28
DNMT3A-215ENST00000496570 ATF1P18846 271 aa13.3□□□□□ -0.28
DNMT3A-215ENST00000496570 IL13RA1P78552 427 aa13.3□□□□□ -0.28
DNMT3A-215ENST00000496570 MRPL28Q13084 256 aaKnown RBP13.3□□□□□ -0.28
DNMT3A-215ENST00000496570 SCGB2A2Q13296 93 aa13.3□□□□□ -0.28
DNMT3A-215ENST00000496570 ZNF676Q8N7Q3 588 aa13.3□□□□□ -0.28
DNMT3A-215ENST00000496570 PNLDC1Q8NA58 520 aaKnown RBP13.3□□□□□ -0.28
DNMT3A-215ENST00000496570 ZNRF1Q8ND25 227 aa13.3□□□□□ -0.28
DNMT3A-215ENST00000496570 DNAAF1Q8NEP3 725 aa13.3□□□□□ -0.28
DNMT3A-215ENST00000496570 OR13C3Q8NGS6 347 aa13.3□□□□□ -0.28
DNMT3A-215ENST00000496570 MED30Q96HR3 178 aa13.3□□□□□ -0.28
DNMT3A-215ENST00000496570 WDFY2Q96P53 400 aa13.3□□□□□ -0.28
DNMT3A-215ENST00000496570 DCTN5Q9BTE1 182 aa13.3□□□□□ -0.28
DNMT3A-215ENST00000496570 ELL3Q9HB65 397 aaPredicted RBP13.3□□□□□ -0.28
DNMT3A-215ENST00000496570 PSORS1C1Q9UIG5 152 aa13.3□□□□□ -0.28
DNMT3A-215ENST00000496570 POLDIP2Q9Y2S7 368 aa13.3□□□□□ -0.28
DNMT3A-215ENST00000496570 NKX6-3A6NJ46 265 aa13.29□□□□□ -0.28
DNMT3A-215ENST00000496570 TMEM212A6NML5 194 aa13.29□□□□□ -0.28
DNMT3A-215ENST00000496570 GPR37O15354 613 aa13.29□□□□□ -0.28
DNMT3A-215ENST00000496570 SERPINA3P01011 423 aa13.29□□□□□ -0.28
DNMT3A-215ENST00000496570 PIPP12273 146 aaPredicted RBP13.29□□□□□ -0.28
DNMT3A-215ENST00000496570 AZGP1P25311 298 aaKnown RBP13.29□□□□□ -0.28
DNMT3A-215ENST00000496570 GABRA2P47869 451 aa13.29□□□□□ -0.28
DNMT3A-215ENST00000496570 CEBPDP49716 269 aaPredicted RBP13.29□□□□□ -0.28
DNMT3A-215ENST00000496570 GBX2P52951 348 aaPredicted RBP13.29□□□□□ -0.28
DNMT3A-215ENST00000496570 AQP4P55087 323 aa13.29□□□□□ -0.28
DNMT3A-215ENST00000496570 CAV3P56539 151 aa13.29□□□□□ -0.28
DNMT3A-215ENST00000496570 CNN3Q15417 329 aaKnown RBP13.29□□□□□ -0.28
DNMT3A-215ENST00000496570 SMIM21Q3B7S5 101 aa13.29□□□□□ -0.28
DNMT3A-215ENST00000496570 LRRC10Q5BKY1 277 aa13.29□□□□□ -0.28
DNMT3A-215ENST00000496570 ASPHD2Q6ICH7 369 aa13.29□□□□□ -0.28
DNMT3A-215ENST00000496570 ZDHHC22Q8N966 263 aa13.29□□□□□ -0.28
DNMT3A-215ENST00000496570 OR5AK2Q8NH90 309 aa13.29□□□□□ -0.28
DNMT3A-215ENST00000496570 ZNF418Q8TF45 676 aaPredicted RBP13.29□□□□□ -0.28
DNMT3A-215ENST00000496570 SLAMF9Q96A28 289 aa13.29□□□□□ -0.28
DNMT3A-215ENST00000496570 BORCS8Q96FH0 119 aa13.29□□□□□ -0.28
DNMT3A-215ENST00000496570 TMEM80Q96HE8 168 aa13.29□□□□□ -0.28
DNMT3A-215ENST00000496570 C19orf24Q9BVV8 132 aa13.29□□□□□ -0.28
DNMT3A-215ENST00000496570 CNTD2Q9H8S5 307 aa13.29□□□□□ -0.28
DNMT3A-215ENST00000496570 PLCXD1Q9NUJ7 323 aa13.29□□□□□ -0.28
DNMT3A-215ENST00000496570 FKBP14Q9NWM8 211 aa13.29□□□□□ -0.28
DNMT3A-215ENST00000496570 SLC25A10Q9UBX3 287 aaPredicted RBP13.29□□□□□ -0.28
DNMT3A-215ENST00000496570 EXOSC1Q9Y3B2 195 aaKnown RBP13.29□□□□□ -0.28
DNMT3A-215ENST00000496570 IRGMA1A4Y4 181 aa13.28□□□□□ -0.28
DNMT3A-215ENST00000496570 H0YJX3 145 aa13.28□□□□□ -0.28
DNMT3A-215ENST00000496570 OGG1O15527 345 aa13.28□□□□□ -0.28
DNMT3A-215ENST00000496570 TOX4O94842 621 aa13.28□□□□□ -0.28
DNMT3A-215ENST00000496570 NXPH2O95156 264 aa13.28□□□□□ -0.28
DNMT3A-215ENST00000496570 MT-ND2P03891 347 aa13.28□□□□□ -0.28
DNMT3A-215ENST00000496570 CCDC159P0C7I6 412 aa13.28□□□□□ -0.28
DNMT3A-215ENST00000496570 ZNF20P17024 532 aa13.28□□□□□ -0.28
DNMT3A-215ENST00000496570 PRDX2P32119 198 aa13.28□□□□□ -0.28
DNMT3A-215ENST00000496570 ARF6P62330 175 aa13.28□□□□□ -0.28
DNMT3A-215ENST00000496570 ST3GAL4Q11206 333 aa13.28□□□□□ -0.28
DNMT3A-215ENST00000496570 CDK5R1Q15078 307 aa13.28□□□□□ -0.28
DNMT3A-215ENST00000496570 CCDC58Q4VC31 144 aa13.28□□□□□ -0.28
DNMT3A-215ENST00000496570 RPL22L1Q6P5R6 122 aaKnown RBP13.28□□□□□ -0.28
DNMT3A-215ENST00000496570 SLC25A26Q70HW3 274 aa13.28□□□□□ -0.28
DNMT3A-215ENST00000496570 BPIFB2Q8N4F0 458 aa13.28□□□□□ -0.28
DNMT3A-215ENST00000496570 PARP16Q8N5Y8 322 aa13.28□□□□□ -0.28
DNMT3A-215ENST00000496570 Q8N7P7 452 aa13.28□□□□□ -0.28
DNMT3A-215ENST00000496570 SIGLECL1Q8N7X8 197 aa13.28□□□□□ -0.28
DNMT3A-215ENST00000496570 OR13C9Q8NGT0 318 aa13.28□□□□□ -0.28
DNMT3A-215ENST00000496570 SPATA3Q8NHX4 192 aa13.28□□□□□ -0.28
DNMT3A-215ENST00000496570 HAVCR2Q8TDQ0 301 aa13.28□□□□□ -0.28
DNMT3A-215ENST00000496570 DMRTB1Q96MA1 342 aa13.28□□□□□ -0.28
DNMT3A-215ENST00000496570 C1orf147Q96MC9 270 aaPredicted RBP13.28□□□□□ -0.28
DNMT3A-215ENST00000496570 PCGF1Q9BSM1 259 aa13.28□□□□□ -0.28
DNMT3A-215ENST00000496570 SUCNR1Q9BXA5 334 aa13.28□□□□□ -0.28
DNMT3A-215ENST00000496570 CNOT2Q9NZN8 540 aaKnown RBP13.28□□□□□ -0.28
DNMT3A-215ENST00000496570 ANK2Q01484 3957 aa13.27□□□□□ -0.28
DNMT3A-215ENST00000496570 IGKV1-12A0A0C4DH73 117 aa13.27□□□□□ -0.29
DNMT3A-215ENST00000496570 TRBV2A0A0J9YWF9 115 aa13.27□□□□□ -0.29
DNMT3A-215ENST00000496570 CENPVL3A0A0U1RRI6 287 aa13.27□□□□□ -0.29
DNMT3A-215ENST00000496570 IGKV1D-12P01611 117 aa13.27□□□□□ -0.29
DNMT3A-215ENST00000496570 PRKACBP22694 351 aa13.27□□□□□ -0.29
DNMT3A-215ENST00000496570 FPR2P25090 351 aa13.27□□□□□ -0.29
DNMT3A-215ENST00000496570 NPBWR2P48146 333 aa13.27□□□□□ -0.29
DNMT3A-215ENST00000496570 RBP2P50120 134 aa13.27□□□□□ -0.29
DNMT3A-215ENST00000496570 ZNF529Q6P280 563 aa13.27□□□□□ -0.29
DNMT3A-215ENST00000496570 BRD3OSQ6XYD6 125 aa13.27□□□□□ -0.29
DNMT3A-215ENST00000496570 OR52N1Q8NH53 320 aa13.27□□□□□ -0.29
DNMT3A-215ENST00000496570 GATAD2BQ8WXI9 593 aa13.27□□□□□ -0.29
DNMT3A-215ENST00000496570 SPSB1Q96BD6 273 aa13.27□□□□□ -0.29
DNMT3A-215ENST00000496570 CEP19Q96LK0 163 aa13.27□□□□□ -0.29
DNMT3A-215ENST00000496570 OPALINQ96PE5 141 aa13.27□□□□□ -0.29
DNMT3A-215ENST00000496570 SPACA5Q96QH8 159 aa13.27□□□□□ -0.29
DNMT3A-215ENST00000496570 VCXQ9H320 206 aa13.27□□□□□ -0.29
DNMT3A-215ENST00000496570 BABAM2Q9NXR7 383 aa13.27□□□□□ -0.29
DNMT3A-215ENST00000496570 IL36RNQ9UBH0 155 aa13.27□□□□□ -0.29
DNMT3A-215ENST00000496570 KPTNQ9Y664 436 aa13.27□□□□□ -0.29
DNMT3A-215ENST00000496570 TENM1Q9UKZ4 2725 aa13.26□□□□□ -0.29
DNMT3A-215ENST00000496570 EFCAB10A6NFE3 127 aa13.26□□□□□ -0.29
DNMT3A-215ENST00000496570 SPRY1O43609 319 aaPredicted RBP13.26□□□□□ -0.29
DNMT3A-215ENST00000496570 INMTO95050 263 aa13.26□□□□□ -0.29
DNMT3A-215ENST00000496570 ALX3O95076 343 aa13.26□□□□□ -0.29
DNMT3A-215ENST00000496570 KNG1P01042 644 aa13.26□□□□□ -0.29
DNMT3A-215ENST00000496570 C21orf33P30042 268 aaPredicted RBP13.26□□□□□ -0.29
DNMT3A-215ENST00000496570 ATP1B3P54709 279 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms