RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 MOB3CQ70IA8 216 aa10.26□□□□□ -0.77
SHKBP1-213ENST00000597325 LRP11Q86VZ4 500 aa10.26□□□□□ -0.77
SHKBP1-213ENST00000597325 TPRA1Q86W33 373 aa10.26□□□□□ -0.77
SHKBP1-213ENST00000597325 OR13G1Q8NGZ3 307 aa10.26□□□□□ -0.77
SHKBP1-213ENST00000597325 OR8S1Q8NH09 359 aa10.26□□□□□ -0.77
SHKBP1-213ENST00000597325 NDNFQ8TB73 568 aa10.26□□□□□ -0.77
SHKBP1-213ENST00000597325 UBASH3BQ8TF42 649 aa10.26□□□□□ -0.77
SHKBP1-213ENST00000597325 SPSB1Q96BD6 273 aa10.26□□□□□ -0.77
SHKBP1-213ENST00000597325 PPIL3Q9H2H8 161 aaKnown RBP10.26□□□□□ -0.77
SHKBP1-213ENST00000597325 TMEM138Q9NPI0 162 aa10.26□□□□□ -0.77
SHKBP1-213ENST00000597325 TMEM100Q9NV29 134 aa10.26□□□□□ -0.77
SHKBP1-213ENST00000597325 NKIRAS2Q9NYR9 191 aa10.26□□□□□ -0.77
SHKBP1-213ENST00000597325 TAAR3PQ9P1P4 343 aa10.26□□□□□ -0.77
SHKBP1-213ENST00000597325 CDC42EP3Q9UKI2 254 aa10.26□□□□□ -0.77
SHKBP1-213ENST00000597325 MEGF11A6BM72 1044 aa10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 A8MV72 311 aaPredicted RBP10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 M0R233 179 aa10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 HS3ST1O14792 307 aa10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 CDRT1O95170 752 aa10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 IL1AP01583 271 aa10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 IGFBP3P17936 291 aaPredicted RBP10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 ATF1P18846 271 aa10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 RAB3BP20337 219 aa10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 AZGP1P25311 298 aaKnown RBP10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 BDKRB2P30411 391 aa10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 SDC2P34741 201 aa10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 TGFBR1P36897 503 aa10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 EVX1P49640 407 aa10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 PSMD7P51665 324 aa10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 SNRPD2P62316 118 aaKnown RBP10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 MXD1Q05195 221 aa10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 MZT1Q08AG7 82 aa10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 EFNB3Q15768 340 aa10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 MSMPQ1L6U9 139 aa10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 ALKBH6Q3KRA9 238 aa10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 CEP78Q5JTW2 689 aa10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 DDI2Q5TDH0 399 aa10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 GLT8D1Q68CQ7 371 aa10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 MUC15Q8N387 334 aa10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 TRMT10AQ8TBZ6 339 aaKnown RBP10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 NPRL2Q8WTW4 380 aa10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 MICU1Q9BPX6 476 aa10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 SLC30A2Q9BRI3 323 aa10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 RTL8AQ9BWD3 113 aa10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 DCSTAMPQ9H295 470 aa10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 UBTD1Q9HAC8 227 aa10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 DYNLRB1Q9NP97 96 aa10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 ZNF701Q9NV72 531 aaPredicted RBP10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 MYEF2Q9P2K5 600 aaKnown RBP10.25□□□□□ -0.77
SHKBP1-213ENST00000597325 B9A039 149 aa10.24□□□□□ -0.77
SHKBP1-213ENST00000597325 LILRA1O75019 489 aa10.24□□□□□ -0.77
SHKBP1-213ENST00000597325 ALX3O95076 343 aa10.24□□□□□ -0.77
SHKBP1-213ENST00000597325 ALDH3B1P43353 468 aa10.24□□□□□ -0.77
SHKBP1-213ENST00000597325 ZNF81P51508 661 aa10.24□□□□□ -0.77
SHKBP1-213ENST00000597325 SPCS2Q15005 226 aa10.24□□□□□ -0.77
SHKBP1-213ENST00000597325 UBE2V2Q15819 145 aa10.24□□□□□ -0.77
SHKBP1-213ENST00000597325 CEACAM21Q3KPI0 293 aa10.24□□□□□ -0.77
SHKBP1-213ENST00000597325 TMEM255AQ5JRV8 349 aa10.24□□□□□ -0.77
SHKBP1-213ENST00000597325 AGAP6Q5VW22 663 aa10.24□□□□□ -0.77
SHKBP1-213ENST00000597325 FOXB2Q5VYV0 432 aa10.24□□□□□ -0.77
SHKBP1-213ENST00000597325 ZNF529Q6P280 563 aa10.24□□□□□ -0.77
SHKBP1-213ENST00000597325 C20orf204Q6ZNR8 217 aa10.24□□□□□ -0.77
SHKBP1-213ENST00000597325 LHFPL2Q6ZUX7 228 aa10.24□□□□□ -0.77
SHKBP1-213ENST00000597325 LRRTM1Q86UE6 522 aa10.24□□□□□ -0.77
SHKBP1-213ENST00000597325 JAGN1Q8N5M9 183 aa10.24□□□□□ -0.77
SHKBP1-213ENST00000597325 PNLDC1Q8NA58 520 aaKnown RBP10.24□□□□□ -0.77
SHKBP1-213ENST00000597325 SPERTQ8NA61 448 aa10.24□□□□□ -0.77
SHKBP1-213ENST00000597325 OR2Z1Q8NG97 314 aa10.24□□□□□ -0.77
SHKBP1-213ENST00000597325 OR10AD1Q8NGE0 317 aa10.24□□□□□ -0.77
SHKBP1-213ENST00000597325 OR51A2Q8NGJ7 313 aa10.24□□□□□ -0.77
SHKBP1-213ENST00000597325 LILRB1Q8NHL6 650 aaPredicted RBP10.24□□□□□ -0.77
SHKBP1-213ENST00000597325 DVL3Q92997 716 aaPredicted RBP10.24□□□□□ -0.77
SHKBP1-213ENST00000597325 BORCS8Q96FH0 119 aa10.24□□□□□ -0.77
SHKBP1-213ENST00000597325 GPER1Q99527 375 aa10.24□□□□□ -0.77
SHKBP1-213ENST00000597325 REG4Q9BYZ8 158 aa10.24□□□□□ -0.77
SHKBP1-213ENST00000597325 TPK1Q9H3S4 243 aa10.24□□□□□ -0.77
SHKBP1-213ENST00000597325 MSL2Q9HCI7 577 aa10.24□□□□□ -0.77
SHKBP1-213ENST00000597325 FBXO9Q9UK97 447 aaPredicted RBP10.24□□□□□ -0.77
SHKBP1-213ENST00000597325 ROS1P08922 2347 aa10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 FAM230AA0A1W2PPH8 454 aa10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 SMIM30A4D0T7 59 aa10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 ZSCAN5BA6NJL1 495 aa10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 OR5B21A6NL26 309 aa10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 ALDOBP05062 364 aa10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 BMP4P12644 408 aa10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 TNFSF4P23510 183 aa10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 SOX6P35712 828 aa10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 RANBP1P43487 201 aa10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 RBP2P50120 134 aa10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 MMP15P51511 669 aa10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 FUT6P51993 359 aa10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 ATP1B3P54709 279 aa10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 HNRNPA0Q13151 305 aaKnown RBP10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 ASPHD2Q6ICH7 369 aa10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 KRT74Q7RTS7 529 aa10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 CROCCP3Q8IVE0 287 aa10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 DNAAF1Q8NEP3 725 aa10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 OR52N4Q8NGI2 321 aa10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 OR5A2Q8NGI9 324 aa10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 HPSE2Q8WWQ2 592 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms