RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 OR51I2Q9H344 312 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 TPK1Q9H3S4 243 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 CNTD2Q9H8S5 307 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 TMEM100Q9NV29 134 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 NKIRAS2Q9NYR9 191 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 STEAP1Q9UHE8 339 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 FBXO9Q9UK97 447 aaPredicted RBP6.94□□□□□ -1.3
NPHP3-204ENST00000469232 SPATA2Q9UM82 520 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 ABCA4P78363 2273 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 USP9YO00507 2555 aaPredicted RBP6.93□□□□□ -1.3
NPHP3-204ENST00000469232 ZSCAN5BA6NJL1 495 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 A6NNC1 897 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 TMEM14DPA8MWL7 114 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 VSTM5A8MXK1 200 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 B9A039 149 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 NOS1APO75052 506 aaPredicted RBP6.93□□□□□ -1.3
NPHP3-204ENST00000469232 TPPPO94811 219 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 CLDN1O95832 211 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 BPNT1O95861 308 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 PLAUP00749 431 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 DANCRP0C864 163 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 UBBP0CG47 229 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 SLC2A2P11168 524 aaPredicted RBP6.93□□□□□ -1.3
NPHP3-204ENST00000469232 CA6P23280 308 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 HTR2CP28335 458 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 ZNF93P35789 620 aaPredicted RBP6.93□□□□□ -1.3
NPHP3-204ENST00000469232 SERPINF1P36955 418 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 PTGFRP43088 359 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 PDZK1IP1Q13113 114 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 ELP2Q6IA86 826 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 C11orf71Q6IPW1 123 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 MEX3BQ6ZN04 569 aaKnown RBP6.93□□□□□ -1.3
NPHP3-204ENST00000469232 MOB3CQ70IA8 216 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 OR2W3Q7Z3T1 314 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 WDR86Q86TI4 376 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 CDH24Q86UP0 819 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 ZNF573Q86YE8 665 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 C11orf53Q8IXP5 236 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 MCFD2Q8NI22 146 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 DIRC2Q96SL1 478 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 MDFIQ99750 246 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 ABCG5Q9H222 651 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 RHOFQ9HBH0 211 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 SMURF1Q9HCE7 757 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 OR5V1Q9UGF6 321 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 ZDHHC8Q9ULC8 765 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 SLC7A11Q9UPY5 501 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 ATP23Q9Y6H3 246 aa6.93□□□□□ -1.3
NPHP3-204ENST00000469232 ROS1P08922 2347 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 ELOA3CA0A087WX78 387 aaPredicted RBP6.92□□□□□ -1.3
NPHP3-204ENST00000469232 LOC100289279A0A1B0GTE1 492 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 LRP5LA4QPB2 252 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 CTDSP2O14595 271 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 HS3ST1O14792 307 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 TIMM8AO60220 97 aaPredicted RBP6.92□□□□□ -1.3
NPHP3-204ENST00000469232 APOA1P02647 267 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 RAB6AP20340 208 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 MNDAP41218 407 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 ATP1B3P54709 279 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 SELENOVP59797 346 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 ERVK11-1P61568 191 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 MAB21L1Q13394 359 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 RAB11BQ15907 218 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 NHLRC3Q5JS37 347 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 FAM209AQ5JX71 171 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 PLCXD3Q63HM9 321 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 ALKBH2Q6NS38 261 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 MZT2AQ6P582 158 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 C1QL2Q7Z5L3 287 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 CCDC190Q86UF4 302 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 CALHM1Q8IU99 346 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 MFSD4AQ8N468 514 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 FAM89BQ8N5H3 189 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 ZNF611Q8N823 705 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 NEUROG1Q92886 237 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 FAM3DQ96BQ1 224 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 SLC25A38Q96DW6 304 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 PIK3IP1Q96FE7 263 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 BORCS8Q96FH0 119 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 MICU1Q9BPX6 476 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 ADAT1Q9BUB4 502 aaKnown RBP6.92□□□□□ -1.3
NPHP3-204ENST00000469232 RTL8AQ9BWD3 113 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 CXXC4Q9H2H0 198 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 LIN7BQ9HAP6 207 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 SEBOXQ9HB31 216 aaPredicted RBP6.92□□□□□ -1.3
NPHP3-204ENST00000469232 CISD1Q9NZ45 108 aaKnown RBP6.92□□□□□ -1.3
NPHP3-204ENST00000469232 TAAR3PQ9P1P4 343 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 DAPK2Q9UIK4 370 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 PEX16Q9Y5Y5 336 aa6.92□□□□□ -1.3
NPHP3-204ENST00000469232 ARFGEF3Q5TH69 2177 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 IGKV1-12A0A0C4DH73 117 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 SMIM30A4D0T7 59 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 FOXI3A8MTJ6 420 aaPredicted RBP6.91□□□□□ -1.3
NPHP3-204ENST00000469232 ZNF732B4DXR9 585 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 H0YL77 283 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 J3QT63 122 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 MAGEB3O15480 346 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 CTAG2O75638 210 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 KDM4BO94953 1096 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 PAHP00439 452 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms