RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 ZMAT1Q5H9K5 638 aa15.43■□□□□ 0.06
HMGA1-201ENST00000311487 PRAMEF6Q5VXH4 476 aa15.43■□□□□ 0.06
HMGA1-201ENST00000311487 C20orf204Q6ZNR8 217 aa15.43■□□□□ 0.06
HMGA1-201ENST00000311487 NR2C2APQ86WQ0 139 aa15.43■□□□□ 0.06
HMGA1-201ENST00000311487 BATF2Q8N1L9 274 aa15.43■□□□□ 0.06
HMGA1-201ENST00000311487 MS4A15Q8N5U1 240 aa15.43■□□□□ 0.06
HMGA1-201ENST00000311487 CSNK2A3Q8NEV1 391 aa15.43■□□□□ 0.06
HMGA1-201ENST00000311487 HPSE2Q8WWQ2 592 aa15.43■□□□□ 0.06
HMGA1-201ENST00000311487 CACNG2Q9Y698 323 aa15.43■□□□□ 0.06
HMGA1-201ENST00000311487 IGKV1-9A0A0C4DH69 117 aa15.42■□□□□ 0.06
HMGA1-201ENST00000311487 LOC100289279A0A1B0GTE1 492 aa15.42■□□□□ 0.06
HMGA1-201ENST00000311487 FUOMA2VDF0 154 aa15.42■□□□□ 0.06
HMGA1-201ENST00000311487 HPXP02790 462 aa15.42■□□□□ 0.06
HMGA1-201ENST00000311487 MAS1P04201 325 aa15.42■□□□□ 0.06
HMGA1-201ENST00000311487 CD1AP06126 327 aa15.42■□□□□ 0.06
HMGA1-201ENST00000311487 DDOSTP39656 456 aa15.42■□□□□ 0.06
HMGA1-201ENST00000311487 TNFAIP6P98066 277 aaPredicted RBP15.42■□□□□ 0.06
HMGA1-201ENST00000311487 MPPED2Q15777 294 aa15.42■□□□□ 0.06
HMGA1-201ENST00000311487 CLVS2Q5SYC1 327 aa15.42■□□□□ 0.06
HMGA1-201ENST00000311487 UBASH3BQ8TF42 649 aa15.42■□□□□ 0.06
HMGA1-201ENST00000311487 ITPKCQ96DU7 683 aa15.42■□□□□ 0.06
HMGA1-201ENST00000311487 PERPQ96FX8 193 aa15.42■□□□□ 0.06
HMGA1-201ENST00000311487 DERL3Q96Q80 235 aa15.42■□□□□ 0.06
HMGA1-201ENST00000311487 OR2V2Q96R30 315 aa15.42■□□□□ 0.06
HMGA1-201ENST00000311487 SRRQ9GZT4 340 aa15.42■□□□□ 0.06
HMGA1-201ENST00000311487 RHBDL2Q9NX52 303 aa15.42■□□□□ 0.06
HMGA1-201ENST00000311487 CHD3Q12873 2000 aaKnown RBP15.41■□□□□ 0.06
HMGA1-201ENST00000311487 ATP6V1G1O75348 118 aa15.41■□□□□ 0.06
HMGA1-201ENST00000311487 PLATP00750 562 aa15.41■□□□□ 0.06
HMGA1-201ENST00000311487 BCAP31P51572 246 aa15.41■□□□□ 0.06
HMGA1-201ENST00000311487 PPP3R1P63098 170 aa15.41■□□□□ 0.06
HMGA1-201ENST00000311487 PAMR1Q6UXH9 720 aa15.41■□□□□ 0.06
HMGA1-201ENST00000311487 WDR86Q86TI4 376 aa15.41■□□□□ 0.06
HMGA1-201ENST00000311487 SERPINA12Q8IW75 414 aa15.41■□□□□ 0.06
HMGA1-201ENST00000311487 ZDHHC23Q8IYP9 409 aa15.41■□□□□ 0.06
HMGA1-201ENST00000311487 FTMTQ8N4E7 242 aa15.41■□□□□ 0.06
HMGA1-201ENST00000311487 POC5Q8NA72 575 aa15.41■□□□□ 0.06
HMGA1-201ENST00000311487 ITLN1Q8WWA0 313 aa15.41■□□□□ 0.06
HMGA1-201ENST00000311487 RFT1Q96AA3 541 aa15.41■□□□□ 0.06
HMGA1-201ENST00000311487 RNF170Q96K19 258 aa15.41■□□□□ 0.06
HMGA1-201ENST00000311487 MS4A5Q9H3V2 200 aa15.41■□□□□ 0.06
HMGA1-201ENST00000311487 DECR2Q9NUI1 292 aa15.41■□□□□ 0.06
HMGA1-201ENST00000311487 COMMD3Q9UBI1 195 aa15.41■□□□□ 0.06
HMGA1-201ENST00000311487 PDZD2O15018 2839 aa15.41■□□□□ 0.06
HMGA1-201ENST00000311487 CST4P01036 141 aa15.41■□□□□ 0.06
HMGA1-201ENST00000311487 GMFBP60983 142 aa15.41■□□□□ 0.06
HMGA1-201ENST00000311487 Q6ZSR3 168 aa15.41■□□□□ 0.06
HMGA1-201ENST00000311487 ANGPTL5Q86XS5 388 aa15.41■□□□□ 0.06
HMGA1-201ENST00000311487 DNAAF1Q8NEP3 725 aa15.41■□□□□ 0.06
HMGA1-201ENST00000311487 OR5P3Q8WZ94 311 aa15.41■□□□□ 0.06
HMGA1-201ENST00000311487 DIRAS2Q96HU8 199 aa15.41■□□□□ 0.06
HMGA1-201ENST00000311487 CHST5Q9GZS9 411 aa15.41■□□□□ 0.06
HMGA1-201ENST00000311487 C14orf119Q9NWQ9 140 aa15.41■□□□□ 0.06
HMGA1-201ENST00000311487 DCAF16Q9NXF7 216 aa15.41■□□□□ 0.06
HMGA1-201ENST00000311487 SERPINA3P01011 423 aa15.4■□□□□ 0.06
HMGA1-201ENST00000311487 CD2P06729 351 aa15.4■□□□□ 0.06
HMGA1-201ENST00000311487 MYL9P24844 172 aa15.4■□□□□ 0.06
HMGA1-201ENST00000311487 FAM131AQ6UXB0 335 aa15.4■□□□□ 0.06
HMGA1-201ENST00000311487 ZNF826PQ6ZT77 177 aa15.4■□□□□ 0.06
HMGA1-201ENST00000311487 OR5D18Q8NGL1 313 aa15.4■□□□□ 0.06
HMGA1-201ENST00000311487 OR5D14Q8NGL3 314 aa15.4■□□□□ 0.06
HMGA1-201ENST00000311487 LURAP1Q96LR2 239 aa15.4■□□□□ 0.06
HMGA1-201ENST00000311487 HIST1H2AAQ96QV6 131 aa15.4■□□□□ 0.06
HMGA1-201ENST00000311487 ANXA2P2A6NMY6 339 aa15.39■□□□□ 0.05
HMGA1-201ENST00000311487 ZNF732B4DXR9 585 aa15.39■□□□□ 0.05
HMGA1-201ENST00000311487 HPGDSO60760 199 aa15.39■□□□□ 0.05
HMGA1-201ENST00000311487 RAF1P04049 648 aa15.39■□□□□ 0.05
HMGA1-201ENST00000311487 AZGP1P25311 298 aaKnown RBP15.39■□□□□ 0.05
HMGA1-201ENST00000311487 CARTPTQ16568 116 aa15.39■□□□□ 0.05
HMGA1-201ENST00000311487 TMEM42Q69YG0 159 aa15.39■□□□□ 0.05
HMGA1-201ENST00000311487 IGFBPL1Q8WX77 278 aa15.39■□□□□ 0.05
HMGA1-201ENST00000311487 ZCCHC4Q9H5U6 513 aa15.39■□□□□ 0.05
HMGA1-201ENST00000311487 CYSLTR2Q9NS75 346 aa15.39■□□□□ 0.05
HMGA1-201ENST00000311487 CCDC168Q8NDH2 2452 aa15.39■□□□□ 0.05
HMGA1-201ENST00000311487 IGKV1-27A0A075B6S5 117 aa15.39■□□□□ 0.05
HMGA1-201ENST00000311487 A0A0G2JK05 382 aa15.39■□□□□ 0.05
HMGA1-201ENST00000311487 FABP12A6NFH5 140 aa15.39■□□□□ 0.05
HMGA1-201ENST00000311487 OVOL3O00110 214 aa15.39■□□□□ 0.05
HMGA1-201ENST00000311487 ZNF205O95201 554 aa15.39■□□□□ 0.05
HMGA1-201ENST00000311487 CEACAM21Q3KPI0 293 aa15.39■□□□□ 0.05
HMGA1-201ENST00000311487 MZT2AQ6P582 158 aa15.39■□□□□ 0.05
HMGA1-201ENST00000311487 TPRA1Q86W33 373 aa15.39■□□□□ 0.05
HMGA1-201ENST00000311487 OR8H2Q8N162 312 aa15.39■□□□□ 0.05
HMGA1-201ENST00000311487 SAP30LQ9HAJ7 183 aa15.39■□□□□ 0.05
HMGA1-201ENST00000311487 ZDHHC8Q9ULC8 765 aa15.39■□□□□ 0.05
HMGA1-201ENST00000311487 TRBV5-7A0A0A0MS05 114 aa15.38■□□□□ 0.05
HMGA1-201ENST00000311487 DHRS7CA6NNS2 312 aa15.38■□□□□ 0.05
HMGA1-201ENST00000311487 PTTG1O95997 202 aa15.38■□□□□ 0.05
HMGA1-201ENST00000311487 HCKP08631 526 aa15.38■□□□□ 0.05
HMGA1-201ENST00000311487 COL8A2P25067 703 aa15.38■□□□□ 0.05
HMGA1-201ENST00000311487 PPOXP50336 477 aa15.38■□□□□ 0.05
HMGA1-201ENST00000311487 OR10A3P58181 314 aa15.38■□□□□ 0.05
HMGA1-201ENST00000311487 BAK1Q16611 211 aa15.38■□□□□ 0.05
HMGA1-201ENST00000311487 UNQ9370/PRO34162Q6UXP9 181 aa15.38■□□□□ 0.05
HMGA1-201ENST00000311487 MOGAT3Q86VF5 341 aa15.38■□□□□ 0.05
HMGA1-201ENST00000311487 OR1M1Q8NGA1 313 aa15.38■□□□□ 0.05
HMGA1-201ENST00000311487 OR52N4Q8NGI2 321 aa15.38■□□□□ 0.05
HMGA1-201ENST00000311487 ACOT12Q8WYK0 555 aa15.38■□□□□ 0.05
HMGA1-201ENST00000311487 MEGF10Q96KG7 1140 aa15.38■□□□□ 0.05
HMGA1-201ENST00000311487 RAB1BQ9H0U4 201 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms