RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 NKX6-3A6NJ46 265 aa12.6□□□□□ -0.39
SCARF1-201ENST00000263071 K7EPK0 472 aa12.6□□□□□ -0.39
SCARF1-201ENST00000263071 CYR61O00622 381 aa12.6□□□□□ -0.39
SCARF1-201ENST00000263071 WISP1O95388 367 aa12.6□□□□□ -0.39
SCARF1-201ENST00000263071 TK1P04183 234 aa12.6□□□□□ -0.39
SCARF1-201ENST00000263071 CAMLGP49069 296 aa12.6□□□□□ -0.39
SCARF1-201ENST00000263071 WDR38Q5JTN6 314 aa12.6□□□□□ -0.39
SCARF1-201ENST00000263071 TMEM183AQ8IXX5 376 aa12.6□□□□□ -0.39
SCARF1-201ENST00000263071 FAM71E2Q8N5Q1 922 aa12.6□□□□□ -0.39
SCARF1-201ENST00000263071 TNFRSF14Q92956 283 aa12.6□□□□□ -0.39
SCARF1-201ENST00000263071 ANKRD9Q96BM1 317 aaPredicted RBP12.6□□□□□ -0.39
SCARF1-201ENST00000263071 CYYR1Q96J86 154 aa12.6□□□□□ -0.39
SCARF1-201ENST00000263071 OR2J1Q9GZK6 312 aa12.6□□□□□ -0.39
SCARF1-201ENST00000263071 OR10A5Q9H207 317 aa12.6□□□□□ -0.39
SCARF1-201ENST00000263071 TUBG2Q9NRH3 451 aa12.6□□□□□ -0.39
SCARF1-201ENST00000263071 MTCH2Q9Y6C9 303 aa12.6□□□□□ -0.39
SCARF1-201ENST00000263071 H0YIG0 161 aa12.6□□□□□ -0.39
SCARF1-201ENST00000263071 TGFBR3LH3BV60 316 aa12.6□□□□□ -0.39
SCARF1-201ENST00000263071 GLSO94925 669 aaPredicted RBP12.6□□□□□ -0.39
SCARF1-201ENST00000263071 SULT1A2P50226 295 aa12.6□□□□□ -0.39
SCARF1-201ENST00000263071 MIB2Q96AX9 1013 aa12.6□□□□□ -0.39
SCARF1-201ENST00000263071 H3BML4 177 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 CD37P11049 281 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 MYF5P13349 255 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 NTSR1P30989 418 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 LBX1P52954 281 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 SUCLG1P53597 346 aaKnown RBP12.59□□□□□ -0.39
SCARF1-201ENST00000263071 DPY19L2P2Q6ZN68 376 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.59□□□□□ -0.39
SCARF1-201ENST00000263071 ZSCAN4Q8NAM6 433 aaPredicted RBP12.59□□□□□ -0.39
SCARF1-201ENST00000263071 TMEM104Q8NE00 496 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 OR9K2Q8NGE7 335 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 RCC1LQ96I51 464 aaKnown RBP12.59□□□□□ -0.39
SCARF1-201ENST00000263071 EMC6Q9BV81 110 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 CKLFQ9UBR5 152 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 OR52A1Q9UKL2 312 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 VDAC3Q9Y277 283 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 IGHV3-20A0A0C4DH32 117 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 OR5AC1P0C628 307 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 ERVFRD-1P60508 538 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 HLA-DQA1Q5Y7H0 255 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 TMEM108Q6UXF1 575 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 ZNF101Q8IZC7 436 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 PAQR4Q8N4S7 273 aaPredicted RBP12.59□□□□□ -0.39
SCARF1-201ENST00000263071 OR4C5Q8NGB2 326 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 OR5D18Q8NGL1 313 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 TSLPQ969D9 159 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 CCDC74AQ96AQ1 378 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 BMFQ96LC9 184 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 SHISA8B8ZZ34 492 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 LINC00271P0C7V0 271 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 GLI4P10075 376 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 DTYMKP23919 212 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 MNX1P50219 401 aaPredicted RBP12.59□□□□□ -0.39
SCARF1-201ENST00000263071 H3F3AP84243 136 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 KIR2DS3Q14952 304 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 RTN4RL2Q86UN3 420 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 SYS1Q8N2H4 156 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 OR13C9Q8NGT0 318 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 RNASEH2CQ8TDP1 164 aaKnown RBP12.59□□□□□ -0.39
SCARF1-201ENST00000263071 NXF5Q9H1B4 397 aaKnown RBP12.59□□□□□ -0.39
SCARF1-201ENST00000263071 ARV1Q9H2C2 271 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 PLEKHA2Q9HB19 425 aa12.59□□□□□ -0.39
SCARF1-201ENST00000263071 MSGN1A6NI15 193 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 J3QW42 95 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 GPRIN2O60269 458 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 WNT11O96014 354 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 IFNA6P05013 189 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 ITGB2P05107 769 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 MDKP21741 143 aaPredicted RBP12.58□□□□□ -0.4
SCARF1-201ENST00000263071 ARL4DP49703 201 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 NPY4RP50391 375 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 RPL19P84098 196 aaKnown RBP12.58□□□□□ -0.4
SCARF1-201ENST00000263071 FMODQ06828 376 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 PMS2P11Q13670 270 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 C1orf87Q8N0U7 546 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 COMMD1Q8N668 190 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 ZNF524Q96C55 264 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 RNF2Q99496 336 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 TRANK1O15050 2925 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 ZNF736B4DX44 427 aaPredicted RBP12.58□□□□□ -0.4
SCARF1-201ENST00000263071 NDUFS8O00217 210 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 CTAG2O75638 210 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 SNCAP37840 140 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 S100A10P60903 97 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 CYCSP99999 105 aaKnown RBP12.58□□□□□ -0.4
SCARF1-201ENST00000263071 SLC9A3R2Q15599 337 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 CARD17Q5XLA6 110 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 BIVMQ86UB2 503 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 TMEM18Q96B42 140 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 TBL1XR1Q9BZK7 514 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 STEAP1Q9UHE8 339 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 PLXNA2O75051 1894 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 LOC102724200A0A096LPH7 203 aaPredicted RBP12.58□□□□□ -0.4
SCARF1-201ENST00000263071 P2RY10O00398 339 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 CCL25O15444 150 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 PIAS2O75928 621 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 C1orf194Q5T5A4 169 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 NUFIP2Q7Z417 695 aaKnown RBP12.58□□□□□ -0.4
SCARF1-201ENST00000263071 WFIKKN1Q96NZ8 548 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms