RNA–Protein interactions for RNA: ENST00000558469.5

CUX1-216, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-216ENST00000558469 C11orf71Q6IPW1 123 aa8.17□□□□□ -1.1
CUX1-216ENST00000558469 OR5A2Q8NGI9 324 aa8.17□□□□□ -1.1
CUX1-216ENST00000558469 OR51A2Q8NGJ7 313 aa8.17□□□□□ -1.1
CUX1-216ENST00000558469 HPSE2Q8WWQ2 592 aa8.17□□□□□ -1.1
CUX1-216ENST00000558469 OR5P3Q8WZ94 311 aa8.17□□□□□ -1.1
CUX1-216ENST00000558469 NRGNQ92686 78 aa8.17□□□□□ -1.1
CUX1-216ENST00000558469 ITPKCQ96DU7 683 aa8.17□□□□□ -1.1
CUX1-216ENST00000558469 RNF170Q96K19 258 aa8.17□□□□□ -1.1
CUX1-216ENST00000558469 KCTD7Q96MP8 289 aa8.17□□□□□ -1.1
CUX1-216ENST00000558469 TECTBQ96PL2 329 aa8.17□□□□□ -1.1
CUX1-216ENST00000558469 DIRC2Q96SL1 478 aa8.17□□□□□ -1.1
CUX1-216ENST00000558469 CCL19Q99731 98 aa8.17□□□□□ -1.1
CUX1-216ENST00000558469 MICU1Q9BPX6 476 aa8.17□□□□□ -1.1
CUX1-216ENST00000558469 RTL8AQ9BWD3 113 aa8.17□□□□□ -1.1
CUX1-216ENST00000558469 CACNG6Q9BXT2 260 aa8.17□□□□□ -1.1
CUX1-216ENST00000558469 SLITRK2Q9H156 845 aa8.17□□□□□ -1.1
CUX1-216ENST00000558469 CXXC4Q9H2H0 198 aa8.17□□□□□ -1.1
CUX1-216ENST00000558469 LIME1Q9H400 295 aa8.17□□□□□ -1.1
CUX1-216ENST00000558469 ABCB9Q9NP78 766 aa8.17□□□□□ -1.1
CUX1-216ENST00000558469 NKIRAS2Q9NYR9 191 aa8.17□□□□□ -1.1
CUX1-216ENST00000558469 FBXO9Q9UK97 447 aaPredicted RBP8.17□□□□□ -1.1
CUX1-216ENST00000558469 SLC7A11Q9UPY5 501 aa8.17□□□□□ -1.1
CUX1-216ENST00000558469 NOP16Q9Y3C1 178 aaKnown RBP8.17□□□□□ -1.1
CUX1-216ENST00000558469 NBPF19A0A087WUL8 3843 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 TRAV1-2A0A0B4J238 106 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 LOC100289279A0A1B0GTE1 492 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 DPPA5A6NC42 116 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 CCDC160A6NGH7 325 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 ZNF732B4DXR9 585 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 MAGEB3O15480 346 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 TPD52L2O43399 206 aaKnown RBP8.16□□□□□ -1.1
CUX1-216ENST00000558469 ALX3O95076 343 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 GABARAPO95166 117 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 PRKACBP22694 351 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 TNFSF4P23510 183 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 MYL9P24844 172 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 BDKRB2P30411 391 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 THBS2P35442 1172 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 CDKN1AP38936 164 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 PPOXP50336 477 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 FUT6P51993 359 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 TMBIM6P55061 237 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 MTCP1P56278 107 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 NCS1P62166 190 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 CCL8P80075 99 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 MAB21L1Q13394 359 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 CTF1Q16619 201 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 ZNF529Q6P280 563 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 LRRTM1Q86UE6 522 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 SPERTQ8NA61 448 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 BORCS8Q96FH0 119 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 SPACA5Q96QH8 159 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 OR2V2Q96R30 315 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 FGF23Q9GZV9 251 aaPredicted RBP8.16□□□□□ -1.1
CUX1-216ENST00000558469 NEK6Q9HC98 313 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 TMEM138Q9NPI0 162 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 SNTG1Q9NSN8 517 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 DECR2Q9NUI1 292 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 C14orf119Q9NWQ9 140 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 IL19Q9UHD0 177 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 CEPT1Q9Y6K0 416 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 FBN2P35556 2912 aa8.16□□□□□ -1.1
CUX1-216ENST00000558469 APCP25054 2843 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 IGKV1-27A0A075B6S5 117 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 SHISA3A0PJX4 238 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 PQLC2LA1A4F0 135 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 NOL3O60936 208 aaKnown RBP8.15□□□□□ -1.1
CUX1-216ENST00000558469 CDRT1O95170 752 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 GRPP07492 148 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 ERCC1P07992 297 aaPredicted RBP8.15□□□□□ -1.1
CUX1-216ENST00000558469 ADH4P08319 380 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 ADRA2CP18825 462 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 SDC2P34741 201 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 CD200P41217 278 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 MTNR1BP49286 362 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 SRP9P49458 86 aaKnown RBP8.15□□□□□ -1.1
CUX1-216ENST00000558469 RBP2P50120 134 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 ATP1B3P54709 279 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 GNG3P63215 75 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 MXD1Q05195 221 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 MZT1Q08AG7 82 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 PCGF3Q3KNV8 242 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 SPRNQ5BIV9 151 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 DDI2Q5TDH0 399 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 PRAMEF6Q5VXH4 476 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 LHFPL2Q6ZUX7 228 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 RNF144BQ7Z419 303 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 WDR86Q86TI4 376 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 TPRA1Q86W33 373 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 DNAAF1Q8NEP3 725 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 OR52N4Q8NGI2 321 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 RAB2BQ8WUD1 216 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 ITLN1Q8WWA0 313 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 RFT1Q96AA3 541 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 SPSB1Q96BD6 273 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 ISOC1Q96CN7 298 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 MEGF10Q96KG7 1140 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 GPER1Q99527 375 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 NKX3-1Q99801 234 aaPredicted RBP8.15□□□□□ -1.1
CUX1-216ENST00000558469 EGLN1Q9GZT9 426 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms