RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 HIST1H3AP68431 136 aa5.72□□□□□ -1.49
LRRC28-203ENST00000447360 TSPAN31Q12999 210 aa5.72□□□□□ -1.49
LRRC28-203ENST00000447360 ECH1Q13011 328 aa5.72□□□□□ -1.49
LRRC28-203ENST00000447360 CNN3Q15417 329 aaKnown RBP5.72□□□□□ -1.49
LRRC28-203ENST00000447360 RSPO1Q2MKA7 263 aaPredicted RBP5.72□□□□□ -1.49
LRRC28-203ENST00000447360 KRTAP27-1Q3LI81 207 aa5.72□□□□□ -1.49
LRRC28-203ENST00000447360 DMRTC1Q5HYR2 192 aa5.72□□□□□ -1.49
LRRC28-203ENST00000447360 NKAPLQ5M9Q1 402 aa5.72□□□□□ -1.49
LRRC28-203ENST00000447360 ATPAF1Q5TC12 328 aaPredicted RBP5.72□□□□□ -1.49
LRRC28-203ENST00000447360 HIST2H3PS2Q5TEC6 136 aa5.72□□□□□ -1.49
LRRC28-203ENST00000447360 HCP5Q6MZN7 132 aa5.72□□□□□ -1.49
LRRC28-203ENST00000447360 PGM2L1Q6PCE3 622 aa5.72□□□□□ -1.49
LRRC28-203ENST00000447360 DUX4L9Q6RFH8 374 aaPredicted RBP5.72□□□□□ -1.49
LRRC28-203ENST00000447360 ZNF826PQ6ZT77 177 aa5.72□□□□□ -1.49
LRRC28-203ENST00000447360 HIST2H3AQ71DI3 136 aa5.72□□□□□ -1.49
LRRC28-203ENST00000447360 DHFR2Q86XF0 187 aa5.72□□□□□ -1.49
LRRC28-203ENST00000447360 OR5AU1Q8NGC0 362 aa5.72□□□□□ -1.49
LRRC28-203ENST00000447360 OR9Q2Q8NGE9 314 aa5.72□□□□□ -1.49
LRRC28-203ENST00000447360 OR4K13Q8NH42 304 aa5.72□□□□□ -1.49
LRRC28-203ENST00000447360 GNPDA2Q8TDQ7 276 aa5.72□□□□□ -1.49
LRRC28-203ENST00000447360 ZNRF4Q8WWF5 429 aa5.72□□□□□ -1.49
LRRC28-203ENST00000447360 SLCO4A1Q96BD0 722 aa5.72□□□□□ -1.49
LRRC28-203ENST00000447360 SLC7A6OSQ96CW6 309 aaPredicted RBP5.72□□□□□ -1.49
LRRC28-203ENST00000447360 ERMAPQ96PL5 475 aaPredicted RBP5.72□□□□□ -1.49
LRRC28-203ENST00000447360 NMNAT3Q96T66 252 aa5.72□□□□□ -1.49
LRRC28-203ENST00000447360 BTBD10Q9BSF8 475 aa5.72□□□□□ -1.49
LRRC28-203ENST00000447360 CHID1Q9BWS9 393 aa5.72□□□□□ -1.49
LRRC28-203ENST00000447360 DNTTIP1Q9H147 329 aa5.72□□□□□ -1.49
LRRC28-203ENST00000447360 RERGLQ9H628 205 aa5.72□□□□□ -1.49
LRRC28-203ENST00000447360 RNPEPL1Q9HAU8 725 aa5.72□□□□□ -1.49
LRRC28-203ENST00000447360 IL20Q9NYY1 176 aa5.72□□□□□ -1.49
LRRC28-203ENST00000447360 MRPL15Q9P015 296 aaKnown RBP5.72□□□□□ -1.49
LRRC28-203ENST00000447360 DUX4Q9UBX2 424 aa5.72□□□□□ -1.49
LRRC28-203ENST00000447360 PITPNC1Q9UKF7 332 aa5.72□□□□□ -1.49
LRRC28-203ENST00000447360 TSSC4Q9Y5U2 329 aaPredicted RBP5.72□□□□□ -1.49
LRRC28-203ENST00000447360 IGHV3OR15-7A0A075B7D8 119 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.71□□□□□ -1.5
LRRC28-203ENST00000447360 OR6C68A6NDL8 312 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 A6NLC8 198 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 F2RL2O00254 374 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 TNFRSF11BO00300 401 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 BHLHE40O14503 412 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 GLCEO94923 617 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 GRPP07492 148 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 ACSM4P0C7M7 580 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 SLC6A6P31641 620 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 GRK5P34947 590 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 VDAC2P45880 294 aaPredicted RBP5.71□□□□□ -1.5
LRRC28-203ENST00000447360 IKZF1Q13422 519 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 MEP1BQ16820 701 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 PCK2Q16822 640 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 UNQ9370/PRO34162Q6UXP9 181 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 TRPM8Q7Z2W7 1104 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 MRPL21Q7Z2W9 205 aaKnown RBP5.71□□□□□ -1.5
LRRC28-203ENST00000447360 ADCK1Q86TW2 530 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 FAM216BQ8N7L0 139 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 LINC00482Q8N8I6 264 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 OR8D4Q8NGM9 314 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 OR9Q1Q8NGQ5 310 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 BCAS4Q8TDM0 211 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 RNF141Q8WVD5 230 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 H1FXQ92522 213 aaKnown RBP5.71□□□□□ -1.5
LRRC28-203ENST00000447360 ASB9Q96DX5 294 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 OR5M11Q96RB7 305 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 ARPC5LQ9BPX5 153 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 THTPAQ9BU02 230 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 MCRIP2Q9BUT9 160 aaKnown RBP5.71□□□□□ -1.5
LRRC28-203ENST00000447360 IFT27Q9BW83 186 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 MUC13Q9H3R2 512 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 MAGIXQ9H6Y5 334 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 EGLN3Q9H6Z9 239 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 KRCC1Q9NPI7 259 aaPredicted RBP5.71□□□□□ -1.5
LRRC28-203ENST00000447360 C14orf119Q9NWQ9 140 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 TCF19Q9Y242 345 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 LSM4Q9Y4Z0 139 aaKnown RBP5.71□□□□□ -1.5
LRRC28-203ENST00000447360 LHFPL6Q9Y693 200 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 STARD9Q9P2P6 4700 aa5.71□□□□□ -1.5
LRRC28-203ENST00000447360 A0A1W2PQ09 198 aa5.7□□□□□ -1.5
LRRC28-203ENST00000447360 TCRBV4S1A1TA0A5B7 111 aa5.7□□□□□ -1.5
LRRC28-203ENST00000447360 A6NDX4 124 aa5.7□□□□□ -1.5
LRRC28-203ENST00000447360 NKX6-3A6NJ46 265 aa5.7□□□□□ -1.5
LRRC28-203ENST00000447360 F5H5K5 113 aa5.7□□□□□ -1.5
LRRC28-203ENST00000447360 H0YAE9 185 aa5.7□□□□□ -1.5
LRRC28-203ENST00000447360 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.7□□□□□ -1.5
LRRC28-203ENST00000447360 SYNGR1O43759 233 aa5.7□□□□□ -1.5
LRRC28-203ENST00000447360 IDH3BO43837 385 aa5.7□□□□□ -1.5
LRRC28-203ENST00000447360 RAMP3O60896 148 aa5.7□□□□□ -1.5
LRRC28-203ENST00000447360 CCNB2O95067 398 aa5.7□□□□□ -1.5
LRRC28-203ENST00000447360 LCATP04180 440 aa5.7□□□□□ -1.5
LRRC28-203ENST00000447360 CHRM2P08172 466 aa5.7□□□□□ -1.5
LRRC28-203ENST00000447360 LYL1P12980 280 aa5.7□□□□□ -1.5
LRRC28-203ENST00000447360 AMY2BP19961 511 aa5.7□□□□□ -1.5
LRRC28-203ENST00000447360 PAX6P26367 422 aa5.7□□□□□ -1.5
LRRC28-203ENST00000447360 CRABP1P29762 137 aa5.7□□□□□ -1.5
LRRC28-203ENST00000447360 GGT2P36268 569 aa5.7□□□□□ -1.5
LRRC28-203ENST00000447360 IFNGR2P38484 337 aa5.7□□□□□ -1.5
LRRC28-203ENST00000447360 NAA10P41227 235 aaPredicted RBP5.7□□□□□ -1.5
LRRC28-203ENST00000447360 CAV3P56539 151 aa5.7□□□□□ -1.5
LRRC28-203ENST00000447360 ELF3P78545 371 aaPredicted RBP5.7□□□□□ -1.5
LRRC28-203ENST00000447360 DGCR2P98153 550 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms