RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 IGFBPL1Q8WX77 278 aa10.33□□□□□ -0.76
IFT20-207ENST00000578547 PP6455Q8WZ26 134 aa10.33□□□□□ -0.76
IFT20-207ENST00000578547 PIGTQ969N2 578 aa10.33□□□□□ -0.76
IFT20-207ENST00000578547 DERL3Q96Q80 235 aa10.33□□□□□ -0.76
IFT20-207ENST00000578547 HIST1H2AAQ96QV6 131 aa10.33□□□□□ -0.76
IFT20-207ENST00000578547 CHST5Q9GZS9 411 aa10.33□□□□□ -0.76
IFT20-207ENST00000578547 SLC22A4Q9H015 551 aa10.33□□□□□ -0.76
IFT20-207ENST00000578547 NOX4Q9NPH5 578 aa10.33□□□□□ -0.76
IFT20-207ENST00000578547 CKLFQ9UBR5 152 aa10.33□□□□□ -0.76
IFT20-207ENST00000578547 ZDHHC8Q9ULC8 765 aa10.33□□□□□ -0.76
IFT20-207ENST00000578547 PLEKHA6Q9Y2H5 1048 aa10.33□□□□□ -0.76
IFT20-207ENST00000578547 NOP16Q9Y3C1 178 aaKnown RBP10.33□□□□□ -0.76
IFT20-207ENST00000578547 NOTCH2Q04721 2471 aa10.33□□□□□ -0.76
IFT20-207ENST00000578547 TRBV5-7A0A0A0MS05 114 aa10.32□□□□□ -0.76
IFT20-207ENST00000578547 LOC100506127A0A0U1RQW1 187 aa10.32□□□□□ -0.76
IFT20-207ENST00000578547 GATBO75879 557 aaKnown RBP10.32□□□□□ -0.76
IFT20-207ENST00000578547 RAF1P04049 648 aa10.32□□□□□ -0.76
IFT20-207ENST00000578547 ERCC1P07992 297 aaPredicted RBP10.32□□□□□ -0.76
IFT20-207ENST00000578547 TNFSF4P23510 183 aa10.32□□□□□ -0.76
IFT20-207ENST00000578547 ALDH3B2P48448 385 aa10.32□□□□□ -0.76
IFT20-207ENST00000578547 PPP3R1P63098 170 aa10.32□□□□□ -0.76
IFT20-207ENST00000578547 CCL8P80075 99 aa10.32□□□□□ -0.76
IFT20-207ENST00000578547 TNFAIP6P98066 277 aaPredicted RBP10.32□□□□□ -0.76
IFT20-207ENST00000578547 TMEM42Q69YG0 159 aa10.32□□□□□ -0.76
IFT20-207ENST00000578547 TMEM91Q6ZNR0 172 aa10.32□□□□□ -0.76
IFT20-207ENST00000578547 GPR141Q7Z602 305 aa10.32□□□□□ -0.76
IFT20-207ENST00000578547 SERPINA12Q8IW75 414 aa10.32□□□□□ -0.76
IFT20-207ENST00000578547 PARP16Q8N5Y8 322 aa10.32□□□□□ -0.76
IFT20-207ENST00000578547 OR5D14Q8NGL3 314 aa10.32□□□□□ -0.76
IFT20-207ENST00000578547 OR13F1Q8NGS4 319 aa10.32□□□□□ -0.76
IFT20-207ENST00000578547 HPSE2Q8WWQ2 592 aa10.32□□□□□ -0.76
IFT20-207ENST00000578547 THRSPQ92748 146 aa10.32□□□□□ -0.76
IFT20-207ENST00000578547 ITFG2Q969R8 447 aa10.32□□□□□ -0.76
IFT20-207ENST00000578547 C10orf35Q96D05 121 aa10.32□□□□□ -0.76
IFT20-207ENST00000578547 YIPF6Q96EC8 236 aa10.32□□□□□ -0.76
IFT20-207ENST00000578547 MICU1Q9BPX6 476 aa10.32□□□□□ -0.76
IFT20-207ENST00000578547 CHCHD6Q9BRQ6 235 aa10.32□□□□□ -0.76
IFT20-207ENST00000578547 RTL8AQ9BWD3 113 aa10.32□□□□□ -0.76
IFT20-207ENST00000578547 OR51E2Q9H255 320 aa10.32□□□□□ -0.76
IFT20-207ENST00000578547 MS4A5Q9H3V2 200 aa10.32□□□□□ -0.76
IFT20-207ENST00000578547 ZCCHC4Q9H5U6 513 aa10.32□□□□□ -0.76
IFT20-207ENST00000578547 CXorf56Q9H5V9 222 aa10.32□□□□□ -0.76
IFT20-207ENST00000578547 ABCB9Q9NP78 766 aa10.32□□□□□ -0.76
IFT20-207ENST00000578547 STUB1Q9UNE7 303 aa10.32□□□□□ -0.76
IFT20-207ENST00000578547 MPC1Q9Y5U8 109 aa10.32□□□□□ -0.76
IFT20-207ENST00000578547 TRAV8-7A0A075B6U6 113 aa10.31□□□□□ -0.76
IFT20-207ENST00000578547 FAM230AA0A1W2PPH8 454 aa10.31□□□□□ -0.76
IFT20-207ENST00000578547 PIN1P1O15428 100 aa10.31□□□□□ -0.76
IFT20-207ENST00000578547 HCKP08631 526 aa10.31□□□□□ -0.76
IFT20-207ENST00000578547 CALRP27797 417 aaKnown RBP10.31□□□□□ -0.76
IFT20-207ENST00000578547 RPL5P46777 297 aaKnown RBP10.31□□□□□ -0.76
IFT20-207ENST00000578547 GPM6AP51674 278 aa10.31□□□□□ -0.76
IFT20-207ENST00000578547 CNN3Q15417 329 aaKnown RBP10.31□□□□□ -0.76
IFT20-207ENST00000578547 UBE2V2Q15819 145 aa10.31□□□□□ -0.76
IFT20-207ENST00000578547 HSD17B12Q53GQ0 312 aa10.31□□□□□ -0.76
IFT20-207ENST00000578547 C22orf42Q6IC83 251 aa10.31□□□□□ -0.76
IFT20-207ENST00000578547 ASPHD2Q6ICH7 369 aa10.31□□□□□ -0.76
IFT20-207ENST00000578547 OR5P3Q8WZ94 311 aa10.31□□□□□ -0.76
IFT20-207ENST00000578547 RPL3LQ92901 407 aaKnown RBP10.31□□□□□ -0.76
IFT20-207ENST00000578547 ITPKCQ96DU7 683 aa10.31□□□□□ -0.76
IFT20-207ENST00000578547 TRMT61AQ96FX7 289 aaKnown RBP10.31□□□□□ -0.76
IFT20-207ENST00000578547 RNF170Q96K19 258 aa10.31□□□□□ -0.76
IFT20-207ENST00000578547 SORCS2Q96PQ0 1159 aa10.31□□□□□ -0.76
IFT20-207ENST00000578547 OR2V2Q96R30 315 aa10.31□□□□□ -0.76
IFT20-207ENST00000578547 DIRC2Q96SL1 478 aa10.31□□□□□ -0.76
IFT20-207ENST00000578547 FUNDC2Q9BWH2 189 aa10.31□□□□□ -0.76
IFT20-207ENST00000578547 RAB1BQ9H0U4 201 aa10.31□□□□□ -0.76
IFT20-207ENST00000578547 CXXC4Q9H2H0 198 aa10.31□□□□□ -0.76
IFT20-207ENST00000578547 DECR2Q9NUI1 292 aa10.31□□□□□ -0.76
IFT20-207ENST00000578547 NKIRAS2Q9NYR9 191 aa10.31□□□□□ -0.76
IFT20-207ENST00000578547 FBXO9Q9UK97 447 aaPredicted RBP10.31□□□□□ -0.76
IFT20-207ENST00000578547 SSR3Q9UNL2 185 aa10.31□□□□□ -0.76
IFT20-207ENST00000578547 SLC7A11Q9UPY5 501 aa10.31□□□□□ -0.76
IFT20-207ENST00000578547 DSCAMO60469 2012 aa10.31□□□□□ -0.76
IFT20-207ENST00000578547 NAV2Q8IVL1 2488 aa10.3□□□□□ -0.76
IFT20-207ENST00000578547 IGKV1-9A0A0C4DH69 117 aa10.3□□□□□ -0.76
IFT20-207ENST00000578547 A0A1B0GWJ7 208 aa10.3□□□□□ -0.76
IFT20-207ENST00000578547 TRDV1A0A1B0GX56 115 aa10.3□□□□□ -0.76
IFT20-207ENST00000578547 A6NLC8 198 aa10.3□□□□□ -0.76
IFT20-207ENST00000578547 ZNF732B4DXR9 585 aa10.3□□□□□ -0.76
IFT20-207ENST00000578547 H7C417 338 aa10.3□□□□□ -0.76
IFT20-207ENST00000578547 OVOL3O00110 214 aa10.3□□□□□ -0.76
IFT20-207ENST00000578547 SULT1B1O43704 296 aa10.3□□□□□ -0.76
IFT20-207ENST00000578547 GPX5O75715 221 aa10.3□□□□□ -0.76
IFT20-207ENST00000578547 SC5DO75845 299 aa10.3□□□□□ -0.76
IFT20-207ENST00000578547 ARL6IP5O75915 188 aa10.3□□□□□ -0.76
IFT20-207ENST00000578547 NCR1O76036 304 aa10.3□□□□□ -0.76
IFT20-207ENST00000578547 LY6HO94772 140 aa10.3□□□□□ -0.76
IFT20-207ENST00000578547 GRPP07492 148 aa10.3□□□□□ -0.76
IFT20-207ENST00000578547 UCHL1P09936 223 aa10.3□□□□□ -0.76
IFT20-207ENST00000578547 ATF1P18846 271 aa10.3□□□□□ -0.76
IFT20-207ENST00000578547 FSTP19883 344 aa10.3□□□□□ -0.76
IFT20-207ENST00000578547 RAB3AP20336 220 aa10.3□□□□□ -0.76
IFT20-207ENST00000578547 AZGP1P25311 298 aaKnown RBP10.3□□□□□ -0.76
IFT20-207ENST00000578547 THBS2P35442 1172 aa10.3□□□□□ -0.76
IFT20-207ENST00000578547 CRYBB2P43320 205 aa10.3□□□□□ -0.76
IFT20-207ENST00000578547 SRP9P49458 86 aaKnown RBP10.3□□□□□ -0.76
IFT20-207ENST00000578547 LSM3P62310 102 aaKnown RBP10.3□□□□□ -0.76
IFT20-207ENST00000578547 PCGF3Q3KNV8 242 aa10.3□□□□□ -0.76
IFT20-207ENST00000578547 CEACAM21Q3KPI0 293 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms