RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 CKLFQ9UBR5 152 aa13.37□□□□□ -0.27
SFSWAP-206ENST00000537582 CGGBP1Q9UFW8 167 aaPredicted RBP13.37□□□□□ -0.27
SFSWAP-206ENST00000537582 FOXJ3Q9UPW0 622 aa13.37□□□□□ -0.27
SFSWAP-206ENST00000537582 CST4P01036 141 aa13.37□□□□□ -0.27
SFSWAP-206ENST00000537582 NRASP01111 189 aa13.37□□□□□ -0.27
SFSWAP-206ENST00000537582 IL1AP01583 271 aa13.37□□□□□ -0.27
SFSWAP-206ENST00000537582 SLC2A2P11168 524 aaPredicted RBP13.37□□□□□ -0.27
SFSWAP-206ENST00000537582 ATF1P18846 271 aa13.37□□□□□ -0.27
SFSWAP-206ENST00000537582 RAB3AP20336 220 aa13.37□□□□□ -0.27
SFSWAP-206ENST00000537582 RAB3BP20337 219 aa13.37□□□□□ -0.27
SFSWAP-206ENST00000537582 KLF3P57682 345 aaPredicted RBP13.37□□□□□ -0.27
SFSWAP-206ENST00000537582 PLCXD3Q63HM9 321 aa13.37□□□□□ -0.27
SFSWAP-206ENST00000537582 CRIP3Q6Q6R5 217 aa13.37□□□□□ -0.27
SFSWAP-206ENST00000537582 CSNK2A3Q8NEV1 391 aa13.37□□□□□ -0.27
SFSWAP-206ENST00000537582 OR10AD1Q8NGE0 317 aa13.37□□□□□ -0.27
SFSWAP-206ENST00000537582 PP6455Q8WZ26 134 aa13.37□□□□□ -0.27
SFSWAP-206ENST00000537582 THRSPQ92748 146 aa13.37□□□□□ -0.27
SFSWAP-206ENST00000537582 ZNF442Q9H7R0 627 aa13.37□□□□□ -0.27
SFSWAP-206ENST00000537582 KCNN3Q9UGI6 736 aa13.37□□□□□ -0.27
SFSWAP-206ENST00000537582 CMAHPQ9Y471 501 aa13.37□□□□□ -0.27
SFSWAP-206ENST00000537582 PMF1-BGLAPU3KQ54 211 aa13.37□□□□□ -0.27
SFSWAP-206ENST00000537582 SPTAN1Q13813 2472 aaKnown RBP13.36□□□□□ -0.27
SFSWAP-206ENST00000537582 PLCE1Q9P212 2302 aa13.36□□□□□ -0.27
SFSWAP-206ENST00000537582 IGLV3-9A0A075B6K5 115 aa13.36□□□□□ -0.27
SFSWAP-206ENST00000537582 A0A0B4J203 849 aa13.36□□□□□ -0.27
SFSWAP-206ENST00000537582 IGHV3-64DA0A0J9YX35 117 aa13.36□□□□□ -0.27
SFSWAP-206ENST00000537582 ANKRD30BLA7E2S9 258 aa13.36□□□□□ -0.27
SFSWAP-206ENST00000537582 IGHV3-13P01766 116 aa13.36□□□□□ -0.27
SFSWAP-206ENST00000537582 TUBG1P23258 451 aa13.36□□□□□ -0.27
SFSWAP-206ENST00000537582 AZGP1P25311 298 aaKnown RBP13.36□□□□□ -0.27
SFSWAP-206ENST00000537582 RBMXP38159 391 aaKnown RBP13.36□□□□□ -0.27
SFSWAP-206ENST00000537582 RPS23P62266 143 aaKnown RBP13.36□□□□□ -0.27
SFSWAP-206ENST00000537582 MOGQ16653 247 aa13.36□□□□□ -0.27
SFSWAP-206ENST00000537582 ZNF672Q499Z4 452 aaPredicted RBP13.36□□□□□ -0.27
SFSWAP-206ENST00000537582 DDI2Q5TDH0 399 aa13.36□□□□□ -0.27
SFSWAP-206ENST00000537582 LINC00299Q6ZSB3 139 aa13.36□□□□□ -0.27
SFSWAP-206ENST00000537582 UTS2BQ765I0 119 aa13.36□□□□□ -0.27
SFSWAP-206ENST00000537582 BORCS5Q969J3 196 aa13.36□□□□□ -0.27
SFSWAP-206ENST00000537582 RFT1Q96AA3 541 aa13.36□□□□□ -0.27
SFSWAP-206ENST00000537582 SLC25A46Q96AG3 418 aa13.36□□□□□ -0.27
SFSWAP-206ENST00000537582 C10orf35Q96D05 121 aa13.36□□□□□ -0.27
SFSWAP-206ENST00000537582 SLITRK2Q9H156 845 aa13.36□□□□□ -0.27
SFSWAP-206ENST00000537582 PALMDQ9NP74 551 aa13.36□□□□□ -0.27
SFSWAP-206ENST00000537582 TUBG2Q9NRH3 451 aa13.36□□□□□ -0.27
SFSWAP-206ENST00000537582 TAAR3PQ9P1P4 343 aa13.36□□□□□ -0.27
SFSWAP-206ENST00000537582 ROS1P08922 2347 aa13.35□□□□□ -0.27
SFSWAP-206ENST00000537582 IGKV1-27A0A075B6S5 117 aa13.35□□□□□ -0.27
SFSWAP-206ENST00000537582 FAM230AA0A1W2PPH8 454 aa13.35□□□□□ -0.27
SFSWAP-206ENST00000537582 ZSCAN5BA6NJL1 495 aa13.35□□□□□ -0.27
SFSWAP-206ENST00000537582 MLNRO43193 412 aa13.35□□□□□ -0.27
SFSWAP-206ENST00000537582 HCKP08631 526 aa13.35□□□□□ -0.27
SFSWAP-206ENST00000537582 SELEP16581 610 aa13.35□□□□□ -0.27
SFSWAP-206ENST00000537582 COL8A1P27658 744 aa13.35□□□□□ -0.27
SFSWAP-206ENST00000537582 BDKRB2P30411 391 aa13.35□□□□□ -0.27
SFSWAP-206ENST00000537582 THBS2P35442 1172 aa13.35□□□□□ -0.27
SFSWAP-206ENST00000537582 ALDH3B1P43353 468 aa13.35□□□□□ -0.27
SFSWAP-206ENST00000537582 MMP15P51511 669 aa13.35□□□□□ -0.27
SFSWAP-206ENST00000537582 HES5Q5TA89 166 aa13.35□□□□□ -0.27
SFSWAP-206ENST00000537582 ZBTB37Q5TC79 503 aa13.35□□□□□ -0.27
SFSWAP-206ENST00000537582 KRT74Q7RTS7 529 aa13.35□□□□□ -0.27
SFSWAP-206ENST00000537582 LYPD6Q86Y78 171 aa13.35□□□□□ -0.27
SFSWAP-206ENST00000537582 C1orf174Q8IYL3 243 aa13.35□□□□□ -0.27
SFSWAP-206ENST00000537582 OR8G5Q8NG78 346 aa13.35□□□□□ -0.27
SFSWAP-206ENST00000537582 TMEM138Q9NPI0 162 aa13.35□□□□□ -0.27
SFSWAP-206ENST00000537582 CISD1Q9NZ45 108 aaKnown RBP13.35□□□□□ -0.27
SFSWAP-206ENST00000537582 MRPL15Q9P015 296 aaKnown RBP13.35□□□□□ -0.27
SFSWAP-206ENST00000537582 PLEKHB1Q9UF11 243 aaPredicted RBP13.35□□□□□ -0.27
SFSWAP-206ENST00000537582 HELZ2Q9BYK8 2649 aaKnown RBP13.34□□□□□ -0.27
SFSWAP-206ENST00000537582 ANXA2P2A6NMY6 339 aa13.34□□□□□ -0.27
SFSWAP-206ENST00000537582 A6NNC1 897 aa13.34□□□□□ -0.27
SFSWAP-206ENST00000537582 CLDN12P56749 244 aa13.34□□□□□ -0.27
SFSWAP-206ENST00000537582 DAZAP2Q15038 168 aaPredicted RBP13.34□□□□□ -0.27
SFSWAP-206ENST00000537582 SFXN4Q6P4A7 337 aa13.34□□□□□ -0.27
SFSWAP-206ENST00000537582 TPRA1Q86W33 373 aa13.34□□□□□ -0.27
SFSWAP-206ENST00000537582 ZDHHC23Q8IYP9 409 aa13.34□□□□□ -0.27
SFSWAP-206ENST00000537582 OR5D18Q8NGL1 313 aa13.34□□□□□ -0.27
SFSWAP-206ENST00000537582 OR5P3Q8WZ94 311 aa13.34□□□□□ -0.27
SFSWAP-206ENST00000537582 ITPKCQ96DU7 683 aa13.34□□□□□ -0.27
SFSWAP-206ENST00000537582 ADAT1Q9BUB4 502 aaKnown RBP13.34□□□□□ -0.27
SFSWAP-206ENST00000537582 SLIRPQ9GZT3 109 aaKnown RBP13.34□□□□□ -0.27
SFSWAP-206ENST00000537582 KCNK15Q9H427 330 aa13.34□□□□□ -0.27
SFSWAP-206ENST00000537582 PLK3Q9H4B4 646 aa13.34□□□□□ -0.27
SFSWAP-206ENST00000537582 DAPK2Q9UIK4 370 aa13.34□□□□□ -0.27
SFSWAP-206ENST00000537582 CLPXO76031 633 aa13.33□□□□□ -0.28
SFSWAP-206ENST00000537582 NAT2P11245 290 aa13.33□□□□□ -0.28
SFSWAP-206ENST00000537582 PRF1P14222 555 aa13.33□□□□□ -0.28
SFSWAP-206ENST00000537582 SERPINF1P36955 418 aa13.33□□□□□ -0.28
SFSWAP-206ENST00000537582 GPM6AP51674 278 aa13.33□□□□□ -0.28
SFSWAP-206ENST00000537582 MST1LQ2TV78 715 aa13.33□□□□□ -0.28
SFSWAP-206ENST00000537582 SPRNQ5BIV9 151 aa13.33□□□□□ -0.28
SFSWAP-206ENST00000537582 WDR86Q86TI4 376 aa13.33□□□□□ -0.28
SFSWAP-206ENST00000537582 JAGN1Q8N5M9 183 aa13.33□□□□□ -0.28
SFSWAP-206ENST00000537582 SPOCK3Q9BQ16 436 aa13.33□□□□□ -0.28
SFSWAP-206ENST00000537582 TMEM100Q9NV29 134 aa13.33□□□□□ -0.28
SFSWAP-206ENST00000537582 V9GY05 133 aa13.33□□□□□ -0.28
SFSWAP-206ENST00000537582 DCHS2Q6V1P9 2916 aa13.33□□□□□ -0.28
SFSWAP-206ENST00000537582 NOTOA8MTQ0 251 aa13.32□□□□□ -0.28
SFSWAP-206ENST00000537582 C3orf80F5H4A9 247 aa13.32□□□□□ -0.28
SFSWAP-206ENST00000537582 F5H5P2 479 aa13.32□□□□□ -0.28
SFSWAP-206ENST00000537582 PDCD5O14737 125 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms